Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005917_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:192687906:192692019:1 gene:Zm00001d005917 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Ternary complex factor MIP1-like protein
Sequence

ATGGAGAAGGATCCGAGGAAGGCCGCGACACCGGCGAAGGGACCGGCCAACGCGGGCACC
CGGGTCACCATGAACAGAATCCAGTCGAGAGAGCGCAAGCTCGCGCTGCAGCAAGATGTG
GATAAGCTCAAGAAGAAGCTGCGCCACGAGGAGAACGTCCACCGCGCTCTGGAGCGGGCG
TTCACGCGGCCGCTCGGCGCCCTGCCTCGCCTGCCGCCGTATCTGCCGTCTCAGACGCTA
GCTCTTCTCGCGGAGGTGGCGGTGCTTGAGGAGGAGGTCGTCCGGCTGGAGGAGCAAGTG
GTGAGTTTCCGGCAAGGGATCTACCAGGAGGCGATCATCTTCTCCTCCACCAAGAACGCC
CAGCTCCCCGACGGCCAAGTTCCCGTGCCGGCGCAGCTCGTACCGTCGTACCCGGTGCTG
AATTCCGAGGTCTCACCGGCGACAGTGAGCCAAGGTCCTCCAGACCATCCTCCCGGCGCT
CGTCCGTCGCCGCACAGCGGCGTGGCCAACGGCAAGCAAACGCCACGGAACCCCGTTGCT
ACCTCGCCGAGCCAGGATGACCGGTCCGGGGCAGGGAAAGAGAACCAGTCGTGCAGCAAC
ACGCCGAGCACGAGCAGCCGCCAGTCGCCGTCGCAGCAGAAGACGCCCAAGTGCAGGGCG
ACGCCGCCTGACAGGCGCAGGGTTACTCCTGCTCAGATGGTGTTCGCGTCGTCCATGCAG
ACAAGCCCTGCTGTTGCGCCTGACCGTAAACGGCCTGCCGACGCTGCTGCTGGCACTGGC
AGCAACTCTGACAACGTGACGACGTCCCACGACGACGCGAGCTCGAGCGTGCCGAACAAA
GTATCGGAGGAGCTGCTCCGGTGCCTGCTGGCCATCTTCTCGCAGATGGGGGGCTCGGCT
GCTGGCGGCGGCCGAGGACTAGGAGACGAGGACCAGCAGGCGCTGTCCCCGTCGGTCTCC
GGCTCCAGCGAGAGCTCGGCGTCGTCGGAGGCGGACGCGTACCCGCAGGACCCCTACGGC
ATCCTGGAGCTGGGCGCCAGGGACATCGGCGCCTACAAGCGGTTCCACGTGGTCGACGCC
GCGTCCTTCGACGGCAACGGCGACACGCCTCTCGTTCGTCGGAGACTCAAGGCCTTGCTG
CGGAGGCTGTCGTCGGTTGACCTGGCGGGGCTCTCCCATCAGCAGAAGCTGGCCTTCTGG
ATCAACGTCTACAATTCCTGCATGATGAACGCGTTCCTGGAGCATGGGATACCTACCACC
CCGCAAATGCTCGTGGCGATGATGCCCAAGGCCACCGTGAGCGTTGGTGGGCGCACGCAC
AGCGCCATGTCCATCGAGCATTTCATCCTGAGGCTGCCCTACAGCGCCAAGCAGGTGAAG
GTGAGCCGGGAAGGGGCCAAGTGCGACGACGGCGACGTGACGGCGGCGCGCGGCGCGTTC
GGGCTGGAGTGGCCCGAGCCCCTCGTCACCTTCGCGCTCTCCTGCGGCAGCTGGTCGTCC
CCCGCGGTGAGGGTGTACACGGCGGCGCGCGTGGAGGAGGAGCTGGAGGCGGCGAAGCGG
GAGTACCTACAGGCGGCCGCGGGCGTGTGGGCGGCGGGGAGGCTGGCGGTCCCGAAGCTC
CTGCACTGGTACCTGCTGGACTTCGCCAAGGACGTGGACGCGCTCATGGACTGGGTCTGC
CTGCAGCTGCCGCCGGAGCTGCGGCAGGAGGCGGTGCGGGCCGTGGAGGTCGGCCGCCGC
GCCGGCGCCGGCGGCCGCGTCCGGGTCCTCCCGTACGAGTTCAGGTTCAGGTACCTGTTG
GCCTCCTGA

Peptide Sequence

PEP ID

Zm00001d005917_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:192687906:192692019:1 gene:Zm00001d005917 transcript:Zm00001d005917_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Ternary complex factor MIP1-like protein
Sequence

MEKDPRKAATPAKGPANAGTRVTMNRIQSRERKLALQQDVDKLKKKLRHEENVHRALERA
FTRPLGALPRLPPYLPSQTLALLAEVAVLEEEVVRLEEQVVSFRQGIYQEAIIFSSTKNA
QLPDGQVPVPAQLVPSYPVLNSEVSPATVSQGPPDHPPGARPSPHSGVANGKQTPRNPVA
TSPSQDDRSGAGKENQSCSNTPSTSSRQSPSQQKTPKCRATPPDRRRVTPAQMVFASSMQ
TSPAVAPDRKRPADAAAGTGSNSDNVTTSHDDASSSVPNKVSEELLRCLLAIFSQMGGSA
AGGGRGLGDEDQQALSPSVSGSSESSASSEADAYPQDPYGILELGARDIGAYKRFHVVDA
ASFDGNGDTPLVRRRLKALLRRLSSVDLAGLSHQQKLAFWINVYNSCMMNAFLEHGIPTT
PQMLVAMMPKATVSVGGRTHSAMSIEHFILRLPYSAKQVKVSREGAKCDDGDVTAARGAF
GLEWPEPLVTFALSCGSWSSPAVRVYTAARVEEELEAAKREYLQAAAGVWAAGRLAVPKL
LHWYLLDFAKDVDALMDWVCLQLPPELRQEAVRAVEVGRRAGAGGRVRVLPYEFRFRYLL
AS

Transcript Sequence

Transcript ID

Zm00001d005917_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:192687906:192692019:1 gene:Zm00001d005917 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Ternary complex factor MIP1-like protein
Sequence

AACTACAACCCGAGAGGCCGAGACCAATTCCCACCACAACACACAAGGAAGCCTGCGCAC
CGCCACCACCATTCACCGCCGCCGAAGCCCGATTCCCAGAGACGCCTCTCCTTGCCCCCG
TCCCCAACCCCAACCAAAGCCACCGCCGAATCGCCTTAATCTGGCTGGAGCGCGCCTTGG
AGCCGTCCGGACCTCAGAGCTCACGGGGAATCTTTAATGGCGTCGGAGTCGCATCGCCAG
CCATAGGAGCCTGATTGACAGAGGCGCCGATTGCCGACTGCCGACTGGCAACTGGCGAGG
CGATCACTTGTCAATCCTGTGCTATCCTTTTCTCGGCGCATTGTCTTGCTTTGTTGATGC
ATACGGCACCGCCGATGAATGGCCGATCTCGGAGGCCGGCAGCGGCGCGCGGCGCGAAAG
CGGCCCCCAAGAGCGACAGCAGAGGGGGTGACAATGTGCGGTGATGGAGAAGGATCCGAG
GAAGGCCGCGACACCGGCGAAGGGACCGGCCAACGCGGGCACCCGGGTCACCATGAACAG
AATCCAGTCGAGAGAGCGCAAGCTCGCGCTGCAGCAAGATGTGGATAAGCTCAAGAAGAA
GCTGCGCCACGAGGAGAACGTCCACCGCGCTCTGGAGCGGGCGTTCACGCGGCCGCTCGG
CGCCCTGCCTCGCCTGCCGCCGTATCTGCCGTCTCAGACGCTAGCTCTTCTCGCGGAGGT
GGCGGTGCTTGAGGAGGAGGTCGTCCGGCTGGAGGAGCAAGTGGTGAGTTTCCGGCAAGG
GATCTACCAGGAGGCGATCATCTTCTCCTCCACCAAGAACGCCCAGCTCCCCGACGGCCA
AGTTCCCGTGCCGGCGCAGCTCGTACCGTCGTACCCGGTGCTGAATTCCGAGGTCTCACC
GGCGACAGTGAGCCAAGGTCCTCCAGACCATCCTCCCGGCGCTCGTCCGTCGCCGCACAG
CGGCGTGGCCAACGGCAAGCAAACGCCACGGAACCCCGTTGCTACCTCGCCGAGCCAGGA
TGACCGGTCCGGGGCAGGGAAAGAGAACCAGTCGTGCAGCAACACGCCGAGCACGAGCAG
CCGCCAGTCGCCGTCGCAGCAGAAGACGCCCAAGTGCAGGGCGACGCCGCCTGACAGGCG
CAGGGTTACTCCTGCTCAGATGGTGTTCGCGTCGTCCATGCAGACAAGCCCTGCTGTTGC
GCCTGACCGTAAACGGCCTGCCGACGCTGCTGCTGGCACTGGCAGCAACTCTGACAACGT
GACGACGTCCCACGACGACGCGAGCTCGAGCGTGCCGAACAAAGTATCGGAGGAGCTGCT
CCGGTGCCTGCTGGCCATCTTCTCGCAGATGGGGGGCTCGGCTGCTGGCGGCGGCCGAGG
ACTAGGAGACGAGGACCAGCAGGCGCTGTCCCCGTCGGTCTCCGGCTCCAGCGAGAGCTC
GGCGTCGTCGGAGGCGGACGCGTACCCGCAGGACCCCTACGGCATCCTGGAGCTGGGCGC
CAGGGACATCGGCGCCTACAAGCGGTTCCACGTGGTCGACGCCGCGTCCTTCGACGGCAA
CGGCGACACGCCTCTCGTTCGTCGGAGACTCAAGGCCTTGCTGCGGAGGCTGTCGTCGGT
TGACCTGGCGGGGCTCTCCCATCAGCAGAAGCTGGCCTTCTGGATCAACGTCTACAATTC
CTGCATGATGAACGCGTTCCTGGAGCATGGGATACCTACCACCCCGCAAATGCTCGTGGC
GATGATGCCCAAGGCCACCGTGAGCGTTGGTGGGCGCACGCACAGCGCCATGTCCATCGA
GCATTTCATCCTGAGGCTGCCCTACAGCGCCAAGCAGGTGAAGGTGAGCCGGGAAGGGGC
CAAGTGCGACGACGGCGACGTGACGGCGGCGCGCGGCGCGTTCGGGCTGGAGTGGCCCGA
GCCCCTCGTCACCTTCGCGCTCTCCTGCGGCAGCTGGTCGTCCCCCGCGGTGAGGGTGTA
CACGGCGGCGCGCGTGGAGGAGGAGCTGGAGGCGGCGAAGCGGGAGTACCTACAGGCGGC
CGCGGGCGTGTGGGCGGCGGGGAGGCTGGCGGTCCCGAAGCTCCTGCACTGGTACCTGCT
GGACTTCGCCAAGGACGTGGACGCGCTCATGGACTGGGTCTGCCTGCAGCTGCCGCCGGA
GCTGCGGCAGGAGGCGGTGCGGGCCGTGGAGGTCGGCCGCCGCGCCGGCGCCGGCGGCCG
CGTCCGGGTCCTCCCGTACGAGTTCAGGTTCAGGTACCTGTTGGCCTCCTGACGACGCGT
GCGTACTACGGTAGGGAGTAGTGTAGTGCCGTGCGTACTGGAGGTAGTAGTAGTAGTCTT
TGCAATAATAAAACGGAGATGGGATTGACTATGCAGTTTTTATTACTAGCGTTTTGTGCT
GTATGTGTGGATTCGGTAGCGGTGTAATGGTGGTTTGTGCGCGCGAGGAACGTTTCTACT
GTGCCGTGCGGCTGTGCTCCAT