Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005902_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:192257012:192280549:1 gene:Zm00001d005902 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec23/Sec24 protein transport family protein
Sequence

ATGTCTGAGTTCCTTGACCTAGAGCTACAAGATGGGATAAGGATGCCCTGGAATGTTATT
CCAGGCACAAAACAGGAGACTGTGAACTGTGTGATTCCTGTTTCCGCTATCTACACACCT
TTGAAACCAATTTCTGATATCCCTGTTCTTCCATATTCACCTCTTCGCTGTCGCATGTGT
CGTTCCATCCTCAACCCTTTCTCCATTGTTGACTATGTTGCTAAGATTTGGGTCTGTTCA
TTCTGCTTTCAACGCAACCAGTTCCCTCAACACTACTCTTCGATCTCAGAAAATAATCTC
CCTGCGGAACTCTTTCCTCAGTACACCACCGTCGAGTACATATCTTCAACTGAAACTGGT
CCTATAGTTCCACCGGTTTTCATTTTTGTTGTAGATACTTGCATGATTGAAGAAGAAATT
GGTTATTTGAAGTCTGCACTGGCACAAGCTGTTGAGCTATTGCCAGATAATTCTCTTGTT
GGATTCATTACGTTCGGGACGTATGTGCAGGTTCATGAATTGGGTTTTGGCTTATTGCCA
AAATCATATGTATTCAAAGGAACAAAGGAGGTCACCAAGGAGCAAATATTGGAACAAATG
TGCTTTTTTGCGGGGAAGAAAATGCCTACCACAGGCGTGATTGCTGGTACCAGAGATGGC
CTTTCATCTGAGAGCATCTCTAGATTTCTGCTGCCTGCTTCTGAATGCGAGTTTGTATTG
AACTCAGTTATAGAAGAAATACAAAAGGACCCTTGGCCTGTTCCAGCTGATCAGCGTGCA
TCTAGGTGCACTGGAGCTGCCTTAAGTGTTGCAGCCAATCTCCTTGGGGTTTGTGTTCCT
GGATCAGGTGCTAGGATAATGGCATTTGTTGGTGGTCCATCTACGGAGGGCCCTGGTCCT
ATTGTATCCAAATCCTTATCAGAGCCCATTCGTTCACACAAAGACCTTGATAAAGACTCG
GCACCACTCTATGATAAAGCTGTTAAGTTTTATGATCAAATTGCAAAGCAGCTTGTGCAC
CAAGGGCATGTGCTGGATTTGTTTGCTTGTGCAGTTGACCAGGTTGGAGTCGCTGAAATG
AAGGTTGCGATTGAGAAGACTGGAGGAATTGTTGTCCTTGCTGAAAGTTTTGGTCATTCT
GTTTTCAAAGACTCACTTCTCCGCATCTTTCAGTCAACAGATGACAACCTTGGTTTATCA
TTCAATGGTATTCTTGAAATTAACTGTTCAAAGGATGTAAAGGTTCAAGGCATCATTGGA
CCCTGTTCTTCCCTGGAGAAGAAAAGTCCTTTGTCTTCCGACACTGTTATTGGTCAAGGA
AACACTAGCGCTTGGAAGATGTGCGGCCTTGACAGGAAGACATCACTTTGCTTGGTATAT
GATATTGCAAAAAAAGATGGCCCAGATTCAATTGCTCAATCAGCAAACAATCAGTTCTAC
TTCCAGTTCTTAACCTACTATCAGCATAATGAGGGTCAGATGAGATTAAGATCGACCACA
ATCTCCAGAAGATGGGTCTCTGGTGACAACCATGTGGAGGAACTAGTAGCTGGCTTTGAT
CAAGAAGCTGCAGCTGCAGTCATGGCACGCTTGGTGTCATTTAAGATGGAAACTGAGGTT
GATTTTGACCCAGTAAGGTGGCTTGATCGAGCTTTGATACGTTTATGCTCAAAATTTGGA
GATTATCAGAAGGAGACACCCTCATCGTTCAGTTTATCCCCACGGCTATCAATATTTCCC
CAATTTATATTTAATTTGAGGCGTTCTCAGTTTGTTCAGGTTTTTAATAACAGTCCTGAT
GAAACTGCGTATTTTAGGATGATGTTGGACAGAGAGAATGTAACCAATACAGTTGTGATG
ATTCAACCTTCACTTATATCCTATTCATTTCAATCAGGGCCAGAGCCAGTTCTCTTGGAT
GCAACTGCAATTGCTTCTGACAAGATCCTTTTATTGGACTCTTATTTTACTGTTGTCATA
TTCCATGGGGTAACCATTGCGCAGTGGCGAAATGCTGGCTACCAAGATCAAGAAGGTCAC
GAGGTTTTTGCTCAGTTGTTAAAAGCTCCACATGAGGAAGCTAATTTAATAATAAAGGAG
CGATTTCCTGTACCCCGTTTGGTAGTCTGTGATCAATATGGATCTCAGGCTCGATTTTTA
CTGGCGAAGTTAAATCCATCAGTGACATATAACTCGGACAATCCCTCCCCTGGTGGAGAC
GTCATATTCACAGATGATGTGAGCTTCCAGGTTTTCATGGACCATCTCCAGCGGCTAGCA
GTCCAATAG

Peptide Sequence

PEP ID

Zm00001d005902_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:192257012:192280549:1 gene:Zm00001d005902 transcript:Zm00001d005902_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec23/Sec24 protein transport family protein
Sequence

MSEFLDLELQDGIRMPWNVIPGTKQETVNCVIPVSAIYTPLKPISDIPVLPYSPLRCRMC
RSILNPFSIVDYVAKIWVCSFCFQRNQFPQHYSSISENNLPAELFPQYTTVEYISSTETG
PIVPPVFIFVVDTCMIEEEIGYLKSALAQAVELLPDNSLVGFITFGTYVQVHELGFGLLP
KSYVFKGTKEVTKEQILEQMCFFAGKKMPTTGVIAGTRDGLSSESISRFLLPASECEFVL
NSVIEEIQKDPWPVPADQRASRCTGAALSVAANLLGVCVPGSGARIMAFVGGPSTEGPGP
IVSKSLSEPIRSHKDLDKDSAPLYDKAVKFYDQIAKQLVHQGHVLDLFACAVDQVGVAEM
KVAIEKTGGIVVLAESFGHSVFKDSLLRIFQSTDDNLGLSFNGILEINCSKDVKVQGIIG
PCSSLEKKSPLSSDTVIGQGNTSAWKMCGLDRKTSLCLVYDIAKKDGPDSIAQSANNQFY
FQFLTYYQHNEGQMRLRSTTISRRWVSGDNHVEELVAGFDQEAAAAVMARLVSFKMETEV
DFDPVRWLDRALIRLCSKFGDYQKETPSSFSLSPRLSIFPQFIFNLRRSQFVQVFNNSPD
ETAYFRMMLDRENVTNTVVMIQPSLISYSFQSGPEPVLLDATAIASDKILLLDSYFTVVI
FHGVTIAQWRNAGYQDQEGHEVFAQLLKAPHEEANLIIKERFPVPRLVVCDQYGSQARFL
LAKLNPSVTYNSDNPSPGGDVIFTDDVSFQVFMDHLQRLAVQ

Transcript Sequence

Transcript ID

Zm00001d005902_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:192257012:192280549:1 gene:Zm00001d005902 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec23/Sec24 protein transport family protein
Sequence

GTTGGGCCGGCCGATAAACAATTTTCCCGTTCGAGCGTCTCGCTTCTCCCGTTCCCGATC
CCGATCCCGATCCCGATCCCGATCCCTGCGTCCTTTCGCTTATCCCGTTGATCCGGCGTT
CACTCGTGCGATCTCCTGTGGCGACAACTGGGCGATCGACGCCGCCGCTGCTGTCGCCGT
CCTATACGAGAGGTGCGCAGGCGTTCGTTGGTCCCTTCGCCAGGCTTTTGTCTACCCTTC
GCCGACGACGAGCACAAGCCAGATTTCTTTGTCTGACTTGTGGAAGCCTCTTACAACTAT
TGTACAAGGCTGCTGTATTGAAGATGTCTGAGTTCCTTGACCTAGAGCTACAAGATGGGA
TAAGGATGCCCTGGAATGTTATTCCAGGCACAAAACAGGAGACTGTGAACTGTGTGATTC
CTGTTTCCGCTATCTACACACCTTTGAAACCAATTTCTGATATCCCTGTTCTTCCATATT
CACCTCTTCGCTGTCGCATGTGTCGTTCCATCCTCAACCCTTTCTCCATTGTTGACTATG
TTGCTAAGATTTGGGTCTGTTCATTCTGCTTTCAACGCAACCAGTTCCCTCAACACTACT
CTTCGATCTCAGAAAATAATCTCCCTGCGGAACTCTTTCCTCAGTACACCACCGTCGAGT
ACATATCTTCAACTGAAACTGGTCCTATAGTTCCACCGGTTTTCATTTTTGTTGTAGATA
CTTGCATGATTGAAGAAGAAATTGGTTATTTGAAGTCTGCACTGGCACAAGCTGTTGAGC
TATTGCCAGATAATTCTCTTGTTGGATTCATTACGTTCGGGACGTATGTGCAGGTTCATG
AATTGGGTTTTGGCTTATTGCCAAAATCATATGTATTCAAAGGAACAAAGGAGGTCACCA
AGGAGCAAATATTGGAACAAATGTGCTTTTTTGCGGGGAAGAAAATGCCTACCACAGGCG
TGATTGCTGGTACCAGAGATGGCCTTTCATCTGAGAGCATCTCTAGATTTCTGCTGCCTG
CTTCTGAATGCGAGTTTGTATTGAACTCAGTTATAGAAGAAATACAAAAGGACCCTTGGC
CTGTTCCAGCTGATCAGCGTGCATCTAGGTGCACTGGAGCTGCCTTAAGTGTTGCAGCCA
ATCTCCTTGGGGTTTGTGTTCCTGGATCAGGTGCTAGGATAATGGCATTTGTTGGTGGTC
CATCTACGGAGGGCCCTGGTCCTATTGTATCCAAATCCTTATCAGAGCCCATTCGTTCAC
ACAAAGACCTTGATAAAGACTCGGCACCACTCTATGATAAAGCTGTTAAGTTTTATGATC
AAATTGCAAAGCAGCTTGTGCACCAAGGGCATGTGCTGGATTTGTTTGCTTGTGCAGTTG
ACCAGGTTGGAGTCGCTGAAATGAAGGTTGCGATTGAGAAGACTGGAGGAATTGTTGTCC
TTGCTGAAAGTTTTGGTCATTCTGTTTTCAAAGACTCACTTCTCCGCATCTTTCAGTCAA
CAGATGACAACCTTGGTTTATCATTCAATGGTATTCTTGAAATTAACTGTTCAAAGGATG
TAAAGGTTCAAGGCATCATTGGACCCTGTTCTTCCCTGGAGAAGAAAAGTCCTTTGTCTT
CCGACACTGTTATTGGTCAAGGAAACACTAGCGCTTGGAAGATGTGCGGCCTTGACAGGA
AGACATCACTTTGCTTGGTATATGATATTGCAAAAAAAGATGGCCCAGATTCAATTGCTC
AATCAGCAAACAATCAGTTCTACTTCCAGTTCTTAACCTACTATCAGCATAATGAGGGTC
AGATGAGATTAAGATCGACCACAATCTCCAGAAGATGGGTCTCTGGTGACAACCATGTGG
AGGAACTAGTAGCTGGCTTTGATCAAGAAGCTGCAGCTGCAGTCATGGCACGCTTGGTGT
CATTTAAGATGGAAACTGAGGTTGATTTTGACCCAGTAAGGTGGCTTGATCGAGCTTTGA
TACGTTTATGCTCAAAATTTGGAGATTATCAGAAGGAGACACCCTCATCGTTCAGTTTAT
CCCCACGGCTATCAATATTTCCCCAATTTATATTTAATTTGAGGCGTTCTCAGTTTGTTC
AGGTTTTTAATAACAGTCCTGATGAAACTGCGTATTTTAGGATGATGTTGGACAGAGAGA
ATGTAACCAATACAGTTGTGATGATTCAACCTTCACTTATATCCTATTCATTTCAATCAG
GGCCAGAGCCAGTTCTCTTGGATGCAACTGCAATTGCTTCTGACAAGATCCTTTTATTGG
ACTCTTATTTTACTGTTGTCATATTCCATGGGGTAACCATTGCGCAGTGGCGAAATGCTG
GCTACCAAGATCAAGAAGGTCACGAGGTTTTTGCTCAGTTGTTAAAAGCTCCACATGAGG
AAGCTAATTTAATAATAAAGGAGCGATTTCCTGTACCCCGTTTGGTAGTCTGTGATCAAT
ATGGATCTCAGGCTCGATTTTTACTGGCGAAGTTAAATCCATCAGTGACATATAACTCGG
ACAATCCCTCCCCTGGTGGAGACGTCATATTCACAGATGATGTGAGCTTCCAGGTTTTCA
TGGACCATCTCCAGCGGCTAGCAGTCCAATAGGATATGAATCCGTAGATCAGTGCATAGA
GCAATTTTATACTACCAATGATATATTCTGTAGAGTGAGAATATTTTTGTTTTGTATGTC
TTACAAATTCGTTGTAGCTGGTTTTAAATTATATAAGTTTCTTTTAGAGCCAATCAAATT
TTGCAACTTGATAAATTATGATAATAAATGAACTGTAGAATGAAGAATTGCATTTTCT