Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005890_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:191852046:191853897:1 gene:Zm00001d005890 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha amylase3 description:Alpha-amylase 1
Sequence	ATGGCGAAGCACTTGGCTGCCATGTGCAGGTGCAGCCTCCTAGTGCTTGTACTGCTCTGC TTGGGCTCCCAGCTGGCCCAATCCCAGGTCCTCTTCCAGGGGTTCAACTGGGAGTCGTGG AAGAAGCAAGGTGGGTGGTACAACTACCTCCTGGGGCGGGTGGACGACATCGCCGCGACG GGGGCCACGCACGTCTGGCTCCCGCCGCCGTCGCACTCGGTGGCGCCGCAGGGGTACATG CCCGGCCGGCTCTACGACCTGGACGCGTCCAAGTACGGCACCCACGCGGAGCTCAAGTCG CTCACCGCGGCGTTCCACGCCAAGGGCGTCCAGTGCGTCGCCGACGTCGTGATCAACCAC CGCTGCGCCGACTACAAGGACGGCCGCGGCATCTACTGCGTCTTCGAGGGCGGCACGCCC GACAGCCGCCTCGACTGGGGCCCCGACATGATCTGCAGCGACGACACGCAGTACTCCAAC GGGCGCGGGCACCGCGACACGGGGGCCGACTTCGCCGCCGCGCCCGACATCGACCACCTC AACCCGCGCGTGCAGCAGGAGCTCTCGGACTGGCTCAACTGGCTCAAGTCCGACCTCGGC TTCGACGGCTGGCGCCTCGACTTCGCCAAGGGCTACTCCGCCGCCGTCGCCAAGGTGTAC GTCGACAGCACCGCCCCCACCTTCGTCGTCGCCGAGATATGGAGCTCCCTCCACTACGAC GGCAACGGCGAGCCGTCCAGCAACCAGGACGCCGACAGGCAGGAGCTGGTCAACTGGGCG CAGGCGGTGGGCGGCCCCGCCGCGGCGTTCGACTTCACCACCAAGGGCGTGCTGCAGGCG GCCGTCCAGGGCGAGCTGTGGCGCATGAAGGACGGCAACGGCAAGGCGCCCGGGATGATC GGCTGGCTGCCGGAGAAGGCCGTCACGTTCGTCGACAACCACGACACCGGCTCCACGCAG AACTCGTGGCCATTCCCCTCCGACAAGGTCATGCAGGGCTACGCCTATATCCTCACGCAC CCAGGAACTCCATGCATCTTCTACGACCACGTTTTCGACTGGAACCTGAAGCAGGAGATC AGCGCGCTGTCTGCGGTGAGGTCAAGAAACGGGATCCACCCGGGGAGCGAGCTGAACATC CTCGCCGCCGACGGGGATCTCTACGTCGCCAAGATTGACGACAAGGTCATCGTGAAGATC GGGTCACGGTACGACGTCGGGAACCTGATCCCCTCAGACTTCCACGCCGTTGCCCATGGC AACAACTACTGCGTTTGGGAGAAGCACGGTCTGAGAGTTCCAGCGGGGCGGCACCACTAG

Peptide Sequence

PEP ID	Zm00001d005890_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:191852046:191853897:1 gene:Zm00001d005890 transcript:Zm00001d005890_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha amylase3 description:Alpha-amylase 1
Sequence	MAKHLAAMCRCSLLVLVLLCLGSQLAQSQVLFQGFNWESWKKQGGWYNYLLGRVDDIAAT GATHVWLPPPSHSVAPQGYMPGRLYDLDASKYGTHAELKSLTAAFHAKGVQCVADVVINH RCADYKDGRGIYCVFEGGTPDSRLDWGPDMICSDDTQYSNGRGHRDTGADFAAAPDIDHL NPRVQQELSDWLNWLKSDLGFDGWRLDFAKGYSAAVAKVYVDSTAPTFVVAEIWSSLHYD GNGEPSSNQDADRQELVNWAQAVGGPAAAFDFTTKGVLQAAVQGELWRMKDGNGKAPGMI GWLPEKAVTFVDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGTPCIFYDHVFDWNLKQEI SALSAVRSRNGIHPGSELNILAADGDLYVAKIDDKVIVKIGSRYDVGNLIPSDFHAVAHG NNYCVWEKHGLRVPAGRHH

Transcript Sequence

Transcript ID	Zm00001d005890_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:191852046:191853897:1 gene:Zm00001d005890 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha amylase3 description:Alpha-amylase 1
Sequence	GACACACAGCCAAAGTACAAGACTCACTTGCATTTTTGGCACACCAGCACAGAAGAAGAA AAAAAAAACAGGCACTGAGCTGAGATGGCGAAGCACTTGGCTGCCATGTGCAGGTGCAGC CTCCTAGTGCTTGTACTGCTCTGCTTGGGCTCCCAGCTGGCCCAATCCCAGGTCCTCTTC CAGGGGTTCAACTGGGAGTCGTGGAAGAAGCAAGGTGGGTGGTACAACTACCTCCTGGGG CGGGTGGACGACATCGCCGCGACGGGGGCCACGCACGTCTGGCTCCCGCCGCCGTCGCAC TCGGTGGCGCCGCAGGGGTACATGCCCGGCCGGCTCTACGACCTGGACGCGTCCAAGTAC GGCACCCACGCGGAGCTCAAGTCGCTCACCGCGGCGTTCCACGCCAAGGGCGTCCAGTGC GTCGCCGACGTCGTGATCAACCACCGCTGCGCCGACTACAAGGACGGCCGCGGCATCTAC TGCGTCTTCGAGGGCGGCACGCCCGACAGCCGCCTCGACTGGGGCCCCGACATGATCTGC AGCGACGACACGCAGTACTCCAACGGGCGCGGGCACCGCGACACGGGGGCCGACTTCGCC GCCGCGCCCGACATCGACCACCTCAACCCGCGCGTGCAGCAGGAGCTCTCGGACTGGCTC AACTGGCTCAAGTCCGACCTCGGCTTCGACGGCTGGCGCCTCGACTTCGCCAAGGGCTAC TCCGCCGCCGTCGCCAAGGTGTACGTCGACAGCACCGCCCCCACCTTCGTCGTCGCCGAG ATATGGAGCTCCCTCCACTACGACGGCAACGGCGAGCCGTCCAGCAACCAGGACGCCGAC AGGCAGGAGCTGGTCAACTGGGCGCAGGCGGTGGGCGGCCCCGCCGCGGCGTTCGACTTC ACCACCAAGGGCGTGCTGCAGGCGGCCGTCCAGGGCGAGCTGTGGCGCATGAAGGACGGC AACGGCAAGGCGCCCGGGATGATCGGCTGGCTGCCGGAGAAGGCCGTCACGTTCGTCGAC AACCACGACACCGGCTCCACGCAGAACTCGTGGCCATTCCCCTCCGACAAGGTCATGCAG GGCTACGCCTATATCCTCACGCACCCAGGAACTCCATGCATCTTCTACGACCACGTTTTC GACTGGAACCTGAAGCAGGAGATCAGCGCGCTGTCTGCGGTGAGGTCAAGAAACGGGATC CACCCGGGGAGCGAGCTGAACATCCTCGCCGCCGACGGGGATCTCTACGTCGCCAAGATT GACGACAAGGTCATCGTGAAGATCGGGTCACGGTACGACGTCGGGAACCTGATCCCCTCA GACTTCCACGCCGTTGCCCATGGCAACAACTACTGCGTTTGGGAGAAGCACGGTCTGAGA GTTCCAGCGGGGCGGCACCACTAGACTAGACTAGACCCATATTCCGCCCAACTCCTACAG ATAATTCTCTTTTCAGGTCCATTTTGAACCTGGAAAAGAAATTTAAGAGAGGCTAAATAA CCGGAATACGATTGTACTGAGCTTCTTTCAGCTAATTATTGAAAGAAGATTATAATGTTT GGATGTACTATTAATTATGTTGGCATGGGGATTTTTGTAACCTCTTAAAACGAGGAAATA AAGACTGTTCTTATTAAGCTGAA