Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005856_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:2:190962214:190972152:1 gene:Zm00001d005856 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP58
Sequence	ATGGCATTCTCCTTCGCCTCGCCGGCTGCGTCGAACCCTTTCCAGACGCCGGCGACGCCG AATCCCTTTCAAACACCGGCTCCGGCCACCTCGCAGGCGCCATCCCTATCGCCTTCGCCG TTCCAGTTCAGCTTCCAGCAGCAGCCGCAGCCACAGCAGCAGGTGGCGCCGGCGGCGCAA CCTCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGAAGCTGATGCTGTACACGACAGATATG AAATCTGCGGGATACAGCACCAAGTGGGAGGAGCTGCACGCCGAGTCGCAGAAGGCCTTA CTCCAGATCGAGGACAAGATACGGGACTACAAAGACGAGTGTGAGAGGTTGGACCAGTGC AGTCGCCTTTATGACTCCTCAATCTCAAATGCCAATTTTGAGCTTGATGCGAGTCGCATT GCTCAGGAACTTGGAGGGACCACCACTGTAATGGAGAGAGAGAAGGCTTCCATTCAAGAG TTGATGAATGTTGTCAATGAAATGATGTGGAACACAGAATTTGGTATTAGGTCATATCTG ATGTTGAGGCCAAGATTCACCCGTCCAAGTGCTGGAGTTGCAAATGGCGGTTCTTCAAAT CCTTCTGCTGGTGCTCCACCCAATCAGCCAGTGGTAGATTTCTACAGTGGAGTCCCAAAG CGTCCTTCCATTTTTATGCAGCGCACTGTCAACAAGTTTGAGTGCTATCTTGCGGAGTGT TGCAAGTGGATCGGGGAGCTAGAGCAGCTTGTTCAAATGGAGACAAATAAAAGATCATCA GATTCTCTAGAATCTCTTCCAAAAGTTATGTCAAATGTGCATGATTACTTCATCTATGTT GCTTCTAAGGTGGAAAATCTTCATCAACATGTCGAATCAATGAAAACTGAATATCTCAAT GAACAACGCCGCACCGGCAACGGGAGCGATCCATTTCTGGAGGCAAACAGACGAGAAGCA GCTAAACAAGAAGCAGCTGCCAGAAGGGTCCATCCAACACTGCATCTGCCTACCCCTGCG CAGCCCACGGCACAGATCGCTGCACCAGCTACAAGCCAACCGCAGCAACCTTCCTTTCCG TCCGCTGCGACTTCCTCAAGCGCCTTCTCAACCTTTAGCACTCCGGCTTCCGCTCCATCC TCGTCTAGTCTGTTTGCAACTCCAACAACTCCAGCTCCATCGGGCAACCTTTTTGGTGCG CCAGGATCGGCTCAGTTGACCACACCATTTGGGACACCTTCCACTCCTACGTTAGCATCG ACGCCAGCTCCTGGATTTGGGACTAGCGCTACATCTAATTTGGGTGGGACATCTCTATTT TCTACACCGTTTGGAGGTGGAGCTACAGCTTCAGGTTCCAGCTTTGGTGGTGCATCCAAA GGAAGGTCGAAGCCCCGGGGACGACGCTAG

Peptide Sequence

PEP ID	Zm00001d005856_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:2:190962214:190972152:1 gene:Zm00001d005856 transcript:Zm00001d005856_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP58
Sequence	MAFSFASPAASNPFQTPATPNPFQTPAPATSQAPSLSPSPFQFSFQQQPQPQQQVAPAAQ PPQPQPQPQPQKLMLYTTDMKSAGYSTKWEELHAESQKALLQIEDKIRDYKDECERLDQC SRLYDSSISNANFELDASRIAQELGGTTTVMEREKASIQELMNVVNEMMWNTEFGIRSYL MLRPRFTRPSAGVANGGSSNPSAGAPPNQPVVDFYSGVPKRPSIFMQRTVNKFECYLAEC CKWIGELEQLVQMETNKRSSDSLESLPKVMSNVHDYFIYVASKVENLHQHVESMKTEYLN EQRRTGNGSDPFLEANRREAAKQEAAARRVHPTLHLPTPAQPTAQIAAPATSQPQQPSFP SAATSSSAFSTFSTPASAPSSSSLFATPTTPAPSGNLFGAPGSAQLTTPFGTPSTPTLAS TPAPGFGTSATSNLGGTSLFSTPFGGGATASGSSFGGASKGRSKPRGRR

Transcript Sequence

Transcript ID	Zm00001d005856_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:190962214:190972152:1 gene:Zm00001d005856 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP58
Sequence	CGGCACATCTCCACTACTTTCCGCCATCGCCGGAGCCGACCCCTTCGTCTCCGCACGCGG CAATGGCATTCTCCTTCGCCTCGCCGGCTGCGTCGAACCCTTTCCAGACGCCGGCGACGC CGAATCCCTTTCAAACACCGGCTCCGGCCACCTCGCAGGCGCCATCCCTATCGCCTTCGC CGTTCCAGTTCAGCTTCCAGCAGCAGCCGCAGCCACAGCAGCAGGTGGCGCCGGCGGCGC AACCTCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGAAGCTGATGCTGTACACGACAGATA TGAAATCTGCGGGATACAGCACCAAGTGGGAGGAGCTGCACGCCGAGTCGCAGAAGGCCT TACTCCAGATCGAGGACAAGATACGGGACTACAAAGACGAGTGTGAGAGGTTGGACCAGT GCAGTCGCCTTTATGACTCCTCAATCTCAAATGCCAATTTTGAGCTTGATGCGAGTCGCA TTGCTCAGGAACTTGGAGGGACCACCACTGTAATGGAGAGAGAGAAGGCTTCCATTCAAG AGTTGATGAATGTTGTCAATGAAATGATGTGGAACACAGAATTTGGTATTAGGTCATATC TGATGTTGAGGCCAAGATTCACCCGTCCAAGTGCTGGAGTTGCAAATGGCGGTTCTTCAA ATCCTTCTGCTGGTGCTCCACCCAATCAGCCAGTGGTAGATTTCTACAGTGGAGTCCCAA AGCGTCCTTCCATTTTTATGCAGCGCACTGTCAACAAGTTTGAGTGCTATCTTGCGGAGT GTTGCAAGTGGATCGGGGAGCTAGAGCAGCTTGTTCAAATGGAGACAAATAAAAGATCAT CAGATTCTCTAGAATCTCTTCCAAAAGTTATGTCAAATGTGCATGATTACTTCATCTATG TTGCTTCTAAGGTGGAAAATCTTCATCAACATGTCGAATCAATGAAAACTGAATATCTCA ATGAACAACGCCGCACCGGCAACGGGAGCGATCCATTTCTGGAGGCAAACAGACGAGAAG CAGCTAAACAAGAAGCAGCTGCCAGAAGGGTCCATCCAACACTGCATCTGCCTACCCCTG CGCAGCCCACGGCACAGATCGCTGCACCAGCTACAAGCCAACCGCAGCAACCTTCCTTTC CGTCCGCTGCGACTTCCTCAAGCGCCTTCTCAACCTTTAGCACTCCGGCTTCCGCTCCAT CCTCGTCTAGTCTGTTTGCAACTCCAACAACTCCAGCTCCATCGGGCAACCTTTTTGGTG CGCCAGGATCGGCTCAGTTGACCACACCATTTGGGACACCTTCCACTCCTACGTTAGCAT CGACGCCAGCTCCTGGATTTGGGACTAGCGCTACATCTAATTTGGGTGGGACATCTCTAT TTTCTACACCGTTTGGAGGTGGAGCTACAGCTTCAGGTTCCAGCTTTGGTGGTGCATCCA AAGGAAGGTCGAAGCCCCGGGGACGACGCTAGATGTAAATGGACCAACGTGAAACGAGGA TGCTCCTGGTTCACTTGACTGCTCCCCTTTCCCTCTATCCTATGCAAAATTTGTGACTAC TTGTCGCCAGCAATTCTAGTGGAGTTTTAAGTGACCTATTGCATGACTACTACCTTTAAG CCTTTGTATCAGATATACCATCGCATTAGTTGTCATAAACTTTTAATCTTTGTGCCCCTT CACAGTCTCTTGCCTGGGTGTCAGGGTGTGCTGTCACAACATAGGGCTGAACAAATCTAG AGTTAGAACATGCCAGCTGGAATTCCAGTTTCTTCTTTGAACATGAGCGTTAGCAGCTCG TTCCTTGGTAGACAATCTCGTTCTTTAATGCACGTATTTGATCGTCATTCCTTTGTTTAG AGGTTACTTCATGCTGTCACCCACGACATGGAAGCCGAGAGCGGCGACGGAGACAGACAC GACGGACGGGGGGTGTATCTTGATTCCACACGGAGTATGCATGGTCGTTCGTGGAATCGT AGTCATGCACAACCATCCGCACATTCCCAGGTGCACCGTTCCAAAGTACAGTAGCCGGCG CTGAAAAGGCTCGGCGACGAAAGGCCACTGGGTTGTCCCGCCGTTCCGGCTTCCAGGCGA TCCATCTCGTTTCGGGGAACGGAAGGCAAAGGCACCGCCCAGAGCCCCAGACCCAGAGAG GCGGACTTGACTCGTCGTCTACGGGGAATCCACGAACGGAACGGGCGCCCACTCAGCAGC CGCAAAAGTAGGTGAATGTAGTGTGGATCCGCCACGAAAAGGGCCAGCTTTATGGATCCC GTTTTACACACTTGAGTGGGCTGCCTTTGCAGCGCACGTTTGTTTACTCGTACTGGCAAT CACTGACGTACGAGCCTGTGAATGACCACACCTGCGAAATGCTCGTACATTTCACTGCAC AAAAAAAAAAAGGAAGATTAACGAGAAGCTGAAAAGGCTGATGCCCAGATATCATCAGCG TCTCTCAAATCACCGAGTACGACCCGGCGTTTGCGGCCGCTCGTTTCCATTTCCATTCCA GAATCAGATAGCTTTCCCTTTGTTCAGAAACCGCGAGCAATGTCTGGTAGTATTTATACG GCCGCGCGTGCTGGACGGGCCAACCGGCCAGGGCCAGTCTCTACATCGAACACTTCGTTC AGACGGCGGCGGCGGCCATGGCCTCTGCTGCAGGGTCTGAGGAGGCGTGCAGGGAGATCC GCCGCACGTGCGGCGCGCCGCGGCGCCTGGGCCTCCTGCTGGCTCCGCGGAGCCCCGCCG AGAGGCAGCAGATCAGGGCGGCGTACCGTGCCAGGTTCGGCGAGGACCTCGCCGCGACGC TGCACGGCACCCTGGCGGCCCCCAACACCAACCAGGTGGACGAGCTCTCCAAGCTGCTCT ACCTGTGGGCGCTGGAGCCGGCGGAACGGGACGCGGTCGTGGCGCGGGAGGCGGTCGAGG GCGGCGTGACCGCGGCCGGCTACCGCGCCCTCGTCGAGGTGTTCACGCGCCGGAAGCAGG ACCAGCTCTTCTTCACCAAGCAGGCCTACGCGGTCAGGTTCAGGAGGAGCCTGGACCAGG ACATGGCCACCGAGCCGTCTCACCCTTACCACAGGCTGCTGCTGGCTCTCGCGGCGTCCC GCAGGTCGCACCACGACGACCTCAGCCAGCACGTGGCGAAATGCGACGCGAGGAGGCTGC ACGACACCAAGAACAGCGGCGCTGGTGCTGGTTCTGGTTCCGTCGTCGACGAGGCTGTGA TCCTCGAGATGTTCAGCAAGAGGAGCATCCCGCAGCTCAGGCTGGCCTTCTGCAGCTACA AGCACATATATGGGCATGACTACACCAAGGCACTGAAGATAAACGGGTCTGGCGAATTCG AAGGACCCCTCAGAGTCGTTGTCAAGTGCATCTACAACCCTTCCAAGTACTACTCCAAGT TACTGCACAGAAGTATGCTACCCGCAGCGACTGATACGAGGATGGTAACGAGGGCTATCT TGGGCAGCGATGATGTCGGTATAGACGAGATCAGATCAGCGTTCCAGAGTAGTTACGGGA AGAGCCTCGCAGAATACATCCAAGAAAACTTGCCTGGGAGTGACTACAGGGATTTCCTCG TGGCTGTGGCGAGTGCGTCAGTGGCACAATGAGGTTGTCCATGCTTGTAGTTGTAGCAGA GGCATCCCTGAGTTGTCCATGGAAGAAAAGGAAAGAAAAAACACTGTTTTGCACGCTGCA AAAGTAAGTCGAACAAGGAAAACAGCAGTCTCATGTGTGGGATTTCAGTTTGTTATACCA TTTTATTTACAATTGCTAGGCTCGACGGTGGAACTACCAGATCTCATATGCAAAAAAAAA AAAGATGAAGATAAGCTTATTGCAGAGCACTATATTTCAGACATCAGGTCAGATGAGCTT CATCTTTCGGAAGTACTGTTGTAGATGCCACAGCTGTAAAACAGAGACTGCAATGCAAAC AACAAGAGACAGCATGCTCAGCCACGTGACCCTAGAATTCGTCTGCTCACTGACGTCCCT CATGTTAGCTTCTCTGCACCGAGAACAACTTCGTTAAATAGATTGCTATTGTACCCTGGA TATCAGCCAGGTACGTGGATAATCACAACATGAAGCTAGAAAAAACAAATGGATGCACAG ACTTGGATTTTAGTAGCAGCAGGTTGTCATGGATTGATTGGACAGCAACTTCGAGCTTGA GCAACTCCAGTTCAACTCCCTGATTATAAAACTCCATGTCATATGGAAGGGGAGTAAAAC AAGACAACAGCTGGCAGTATAACGCCTCATTTTTTAATATACTTCACCTCGATCTTTTCC TTTTTGGCAACAGAATCCCAGTCTCTACTAGCCAGCCCAATTTTCCAGTCAAGGTTTAGC TTCACCACTAACCCTCTGTCCTCACCATCAATTGAGAAGCAGGCAAGGTAGTTCCCTGCT TCTGCTGTGGTAAATGCAAATTGCCCCATCGAAACCTTCTCTTTCTTATGAACAATGTCT CCAAAAGGGGACGTAACCTGAAATAATGACCCCCCAAAGAAATGTAAGCATGTTAGACAA CTCCCGGTCAATGTCCAGTTCCTCTCCCAGCAAAGTTACCAGTATGTTCTCTATGAAGTG AATTGCAATAGATTTATCCACTACCACTACCATGCGCAAATAAGTCAAAGGCTTTTGAGG GTAAAATGTTGCAATATGGAGGTGGATTCCATGTCTCCTGTGTTTCATAATCACAACTCT ATCCAACAAAATGGCGCCCATTTGTAGTTCCCTCTAATCGAAGGTCGAGTTTATGGCCCA CATGCAAGATAAGCAAGGTGTTGGACAGCATCTTCCAGTTTCATTATTGAAGAACTAACA ATGTAACCGTGATCCATTTGATGTACATGTACCACAAACAATAG