Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005843_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:190605384:190606902:1 gene:Zm00001d005843 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 2 description:AT-HSFB4

Sequence

ATGGAGAGGTGCGGGAGCTGGGACTGCGACGCGGCGGCAGCGCAGAAGGCGGTACCGGCG
CCGTTCCTGACCAAGACGTACCAGCTGGTGGACGACCCGGCCACGGACCACATCGTCTCC
TGGGGGGACGACCGGGTCTCCACCTTCGTGGTCTGGCGCCCGCCGGAGTTCGCGCGCGAC
ATCCTCCCCAACTACTTCAAGCACAACAACTTCTCCTCCTTCGTTCGACAGCTAAACACC
TACGGGTTCCGGAAGGTCGTCCCGGAGCGGTGGGAGTTCGGGAACGAGTTCTTCCGGAAG
GGGGAGAAGCAGCTGCTGTGCGAGATCCACCGGCGGAAGACGTCGACGTCCGCGGCTCCG
CCGTCGCCTCCGCCATTCTTCGCGGCGCCTCACTTCCCGCTCTTCCACCCGGACGCCCCG
CACCACCACCACCACCACCAGTTCGTGGGGGGAGGAGACGACGGGGCTGTGGCGGCCGCG
CACGTCGGCGGCGTCGGCGTCGCCCTCGCGTTCCCGCACCCGCATTGTTGGAGGGAGCCG
CCGCACTCCGCCGCGCCGGTAGCCACGCGGCTGCTAGCCCTGGGCGCGGCTCCTCCGGCG
CCGTCGTCCCCGCTGCCGGCCGCCGATGCCGGCGGAGGCGGGCGCGCGGCCGTGCTGGTG
GAGGAGAACGAGCGGCTGCGGCGCAGCAACGCGGCGCTGCTGCAGGAGCTGGCGCACATG
CGCAAGCTGTACAACGACATCATCTACTTCGTGCAGAACCACGTGCGCCCCGCGGCGCCC
AGCCCTGCCGCGGCCGCGTTCCTGCAGGGCCTCGGCCTGCAGGCGCGCAAGAAGCCCGCC
GCGGGGCCGCTCAACCACTCCGGTGGGAGCACCACGTCCAGCAGCTCGCTCACCATCGCG
GAGGAGGAGCCCTCGCCCCCGCCCCCGCCGCAGCAGGCCGACAAGAGCGCCGGAAGCAGC
GGCACTGCGCGGTCTGCCGCCGACCGCGCGCCGCCCACCATGCTCTTCGGAGTGCACCTC
AGCGCCGCGCGAGGCAGCAAGAGGCCGGCTTCCCCGGAGGAAGAAGACGACCAGTCGCCC
ACGTCGCCTGCTGGGAAGCCACGGCTGGCGCTGGAGTGCGCCGGCTTGAGCCTGGCCGTC
GCGGTGCCCTCCGCCGGCGCCTCGTCCCCTGCTAGCACTAGCTAG

Peptide Sequence

PEP ID

Zm00001d005843_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:190605384:190606902:1 gene:Zm00001d005843 transcript:Zm00001d005843_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 2 description:AT-HSFB4

Sequence

MERCGSWDCDAAAAQKAVPAPFLTKTYQLVDDPATDHIVSWGDDRVSTFVVWRPPEFARD
ILPNYFKHNNFSSFVRQLNTYGFRKVVPERWEFGNEFFRKGEKQLLCEIHRRKTSTSAAP
PSPPPFFAAPHFPLFHPDAPHHHHHHQFVGGGDDGAVAAAHVGGVGVALAFPHPHCWREP
PHSAAPVATRLLALGAAPPAPSSPLPAADAGGGGRAAVLVEENERLRRSNAALLQELAHM
RKLYNDIIYFVQNHVRPAAPSPAAAAFLQGLGLQARKKPAAGPLNHSGGSTTSSSSLTIA
EEEPSPPPPPQQADKSAGSSGTARSAADRAPPTMLFGVHLSAARGSKRPASPEEEDDQSP
TSPAGKPRLALECAGLSLAVAVPSAGASSPASTS

Transcript Sequence

Transcript ID

Zm00001d005843_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:190605384:190606902:1 gene:Zm00001d005843 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 2 description:AT-HSFB4

Sequence

GTAATCTCAATCGTATCGTCCACCTCAACAAACCTTCGTCCACGCTTCGACTCCTGCAGG
AGTGAGGGAGAGAGTGATGGAGAGGTGCGGGAGCTGGGACTGCGACGCGGCGGCAGCGCA
GAAGGCGGTACCGGCGCCGTTCCTGACCAAGACGTACCAGCTGGTGGACGACCCGGCCAC
GGACCACATCGTCTCCTGGGGGGACGACCGGGTCTCCACCTTCGTGGTCTGGCGCCCGCC
GGAGTTCGCGCGCGACATCCTCCCCAACTACTTCAAGCACAACAACTTCTCCTCCTTCGT
TCGACAGCTAAACACCTACGGGTTCCGGAAGGTCGTCCCGGAGCGGTGGGAGTTCGGGAA
CGAGTTCTTCCGGAAGGGGGAGAAGCAGCTGCTGTGCGAGATCCACCGGCGGAAGACGTC
GACGTCCGCGGCTCCGCCGTCGCCTCCGCCATTCTTCGCGGCGCCTCACTTCCCGCTCTT
CCACCCGGACGCCCCGCACCACCACCACCACCACCAGTTCGTGGGGGGAGGAGACGACGG
GGCTGTGGCGGCCGCGCACGTCGGCGGCGTCGGCGTCGCCCTCGCGTTCCCGCACCCGCA
TTGTTGGAGGGAGCCGCCGCACTCCGCCGCGCCGGTAGCCACGCGGCTGCTAGCCCTGGG
CGCGGCTCCTCCGGCGCCGTCGTCCCCGCTGCCGGCCGCCGATGCCGGCGGAGGCGGGCG
CGCGGCCGTGCTGGTGGAGGAGAACGAGCGGCTGCGGCGCAGCAACGCGGCGCTGCTGCA
GGAGCTGGCGCACATGCGCAAGCTGTACAACGACATCATCTACTTCGTGCAGAACCACGT
GCGCCCCGCGGCGCCCAGCCCTGCCGCGGCCGCGTTCCTGCAGGGCCTCGGCCTGCAGGC
GCGCAAGAAGCCCGCCGCGGGGCCGCTCAACCACTCCGGTGGGAGCACCACGTCCAGCAG
CTCGCTCACCATCGCGGAGGAGGAGCCCTCGCCCCCGCCCCCGCCGCAGCAGGCCGACAA
GAGCGCCGGAAGCAGCGGCACTGCGCGGTCTGCCGCCGACCGCGCGCCGCCCACCATGCT
CTTCGGAGTGCACCTCAGCGCCGCGCGAGGCAGCAAGAGGCCGGCTTCCCCGGAGGAAGA
AGACGACCAGTCGCCCACGTCGCCTGCTGGGAAGCCACGGCTGGCGCTGGAGTGCGCCGG
CTTGAGCCTGGCCGTCGCGGTGCCCTCCGCCGGCGCCTCGTCCCCTGCTAGCACTAGCTA
GCTAAGCTCACTCACCTTGCGCGCAACCTGACGCGCGTTTGCATGCTGCTGCATGCAAAC
GCAACGGCGGGCGTGGCCGTTTTGTTGTTCTAGCTCTAGTTTGATCGACGTGTTCCATTT
GAACCGGTAGATCCAGATGGGTTCTCTC