Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005831_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:2:190284861:190291059:-1 gene:Zm00001d005831 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid:diacylglycerol acyltransferase 1
Sequence

ATGTACAGAGCTATCGCTCCTGATGTCCTGGACTCTGATTTTCTTGGACTTCAAACTTTG
CGCCATTTGATGCGTATGACCCGAACATGGGATTCAACAATGTCAATGCTTCCTAAAGGT
GGTGATACAATTTGGGGAAATCTGGATTGGTCTCCAGAAGATGGCCTTGAATGTAAAGCT
AAGAAGCATAAAACCAATGATACCGAGGTTTCTAAGGATAGCAATGGGGAAAATATCGAA
GTTCAACCTGAACCTATAAACTACGGAAGGCTGGTATCCTTCGGTAAAGATGTAGCAGAG
GCACCTTCTTCAGAGATTGAACAGATAGAATTTCGTGATGCTGTTAAAGGTAACGATATC
GTCCATTCAAATGCATCATGCCGGGAGATCTGGACAGAGTACCATGAATTAGGATGGGGT
GGAATAAAGGCAGTCGCAGACTACAAAGTTTACACTGCCAGTTCTGTTATAGACCTTCTT
CACTTTGTTGCTCCAAGGATGATGCAGCGTGGAAATGTCCACTTTTCATATGGAATTGCT
GATAACTTGGATGATCCGAAATATCAACATTACAAATATTGGTCAAACCCCTTGGAAACA
AAGCTACCGAATGCTCCTGACATGGAAATAATTTCCATGTACGGAGTAGGCATTCCTACT
GAAAGGGCATATGTCTACAAGTTGGCTCCACAGGCAGAGTGCTATATACCATTCCGGATT
GACGCCTCGGCTGATGGCGGGGAGGAAAACAAATGCTTGAAAGGGGGTGTTTACTTAGCT
GACGGCGACGAAACTGTTCCAGTTCTTAGCGCGGGCTACATGTGTGCAAAAGGGTGGCGT
GGCAAAACTCGTTTCAACCCTGCCGGCAGCAAGACTTACGTGAGAGAGTACAGCCATTCA
CCACCCTCAACTCTCCTGGAAGGCAGGGGCACTCAGAGCGGTGCACATGTTGATATAATG
GGGAACTTCGCTTTGATCGAGGACATCATCAGGATAGCTGCCGGGGCAACCGGTGAGGAA
ATTGGTGGCGACCAGGTTTATTCAGATATATTCAAATGGTCAGAGAAAATCAAATTGAAA
TTGTAA

Peptide Sequence

PEP ID

Zm00001d005831_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:2:190284861:190291059:-1 gene:Zm00001d005831 transcript:Zm00001d005831_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid:diacylglycerol acyltransferase 1
Sequence

MYRAIAPDVLDSDFLGLQTLRHLMRMTRTWDSTMSMLPKGGDTIWGNLDWSPEDGLECKA
KKHKTNDTEVSKDSNGENIEVQPEPINYGRLVSFGKDVAEAPSSEIEQIEFRDAVKGNDI
VHSNASCREIWTEYHELGWGGIKAVADYKVYTASSVIDLLHFVAPRMMQRGNVHFSYGIA
DNLDDPKYQHYKYWSNPLETKLPNAPDMEIISMYGVGIPTERAYVYKLAPQAECYIPFRI
DASADGGEENKCLKGGVYLADGDETVPVLSAGYMCAKGWRGKTRFNPAGSKTYVREYSHS
PPSTLLEGRGTQSGAHVDIMGNFALIEDIIRIAAGATGEEIGGDQVYSDIFKWSEKIKLK
L

Transcript Sequence

Transcript ID

Zm00001d005831_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:190284861:190291059:-1 gene:Zm00001d005831 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid:diacylglycerol acyltransferase 1
Sequence

AAGCGCGAACCCCGCGAAGCTGCCAAGCCGCGACTGCCCCTCGACCTGCCCGCTTCCTCC
GACGCCTAGGGTTTTCTACCGGGCGCCGCCGCCGCAGCCGCGGCCGGGGATGCAGGTGGC
CCTGCGCAGTTAGCCGCTTTTGGATCCACCGCCGCCGCGCGCCATGTCGCTCCTGCGGCG
GCGGAAGCAGCAGCAGCTACCGCCCTCGGAGGGCGACGGGTCCGACCACGACGACAACGA
CAAGGGGAAGAAGCCGTCCTCGTCCTCCGCGCCGCCGTCCAAGGAGCCCACGAGGCGGAC
CAAGGCCAAGTGGTCGTGCGTGGACAGCTGCTGCTGGCTGGTCGGGTGCGTGTGCTCCGC
CTGGTGGTTGCTGCTCTTTCTCTACAACGCGATGCCAGCTTCGTTCCCGCAGTATGTCAC
CGAGGCCATCACGGGGCCGCTCCCGGACCCGCCCGGGGTCAAGCTGCAGAAGGAGGGGCT
GCGAGCTAAGCACCCCGTCGTCTTTGTCCCCGGCATCGTCACCGGGGGCCTCGAGCTATG
GGAGGGACACCAATGCGCTGAGGGTCTCTTCCGCAAGCGGCTATGGGGCGGCACATTTGG
TGACGTATACAAGAGGTGCTTTATCCTCCTACTATTTTGTTGTTGTTTTTTTGTTTCCGG
AATCACAGTCGTCCTCGTGAATTTAACAGTAACTAGAACTGCAGTGTGATTGGTTTTGAA
AGGTTATTTGTTTCTTTGGTTGGTTGGACCTATCAATTGGATGTTTGTTGCCTACATCAC
ATGTTCTTTAAGTTTACTTTATTTGGTCATTGATATTGTCTTTATAAAGTGCAGATTCAG
TGTTTTGCTAATGTTACTGGGAATAGTTATGTGTTATTACCTTGTATTGTTTCGCAAATG
TTACTGATTGCTAATCAACCTCGTCTTTTATATAGTTTTATTTAAGCATTAAGAATTTAA
TTCCTATGAGACTTTATAGCTGTCTTTTCAGGAAATTCTTCTTTTCAGAGACTCGGAGCT
ATCTCAGTGACAGGGTACTCACTGAGATCTCGGCAATGATAATTCCTCTATGATTTATCT
TTTTTGTTTTATGCAAGGGTCCAAAAGTTCATTGTACTTTGATTTGGCCTTGTGCTTGGT
GAGTAGGTTGGCAGCCTGTTTGGTCCCAATCTCTGTTTTAGTTATGTAGCTTCTCAAGAT
CTGAAATATAGCAGCAAAAACGGCTTACTGTTGTCTTGACGCAGTGTTTTTTTAGAAAGC
GCTGAAAATTTTCTTAGTACCACTAGTGGAAGTGTGGAACTTGAAGTGTGCAATATATGC
ACTTTGGACCTGCATGGTGCTGGTGTCTTGTGAAACTATAAAGCACCAACACTTCTCTTG
TACTATTTCCTTGCCCTTTACTATTCTTTCTCATCCTACTTGGTTTAGGTGGACACATGG
GAACTGTTTTTATGTCGTGAAGAATAGTTATTTTTCTAAATCATGTAGTTTCTAAACTTT
CAGAAGAAAACTGCATTTTGCATGAAAAGCTGGAGCTTTTTTTCTGGTACTAGGCATGCA
TAGCAAGGTTTCAGAAACAATTTGGTCCCCTCTAGCAGTTCTACCATTCAGGTCTTGCTT
TTATAGAAAGATCCATGTTGCCTGCAATGTACTTTCTGGAAAGTGTACCGACCAGAATTT
TGATCTTATTAGTCTTGTGCTGTTGAGCTATCCATGTATACTACAGGGAAAAGAAATGCC
TTAGGGCTAGTTTGGCAACCTCATTTTTCTATGGGATTTTCAGTTTCCCAAGGGAAAATG
AACTAATTTCCCATGGGAAAATGAAAAACCCTTGGGAAATTGTGGTTCCCAAACCAGCCC
TTACAGTTTATTTTAAACAGTTACTTATTTGCACTAACATTTTGGCTGGATCATTGTTAT
TGGTTGCAAATATTTGGATTCTGTCATTCTGAAATCTCAAGTGCATTAAACCTCATTGGG
CCCGGCATTATTTTGGCTACCAGGAAAATGAGGGGTTATGGTTTCACTTTTTTTTCCTCA
GCTGAAATCCAATTTACTATGCTCAATTGCCCATCGTGAAGAACATACAATTTATGAATC
TTGAACTTCAGAAGTTCTTCATTTGCCGTCCTATGAAACATGAGGACAGGTTTCACAACA
CATTTTGACATTATATCTTTATCAAGTCAGTTGTGGTGAACTGTGAACAAATGTGCTTGT
TATGCATATCGGCACCTCTTGTATTTGCATTCTTCCCCTAGCAGTAAGGTCAACGGCACT
CAGATGGGAAATAACCGAAGCATCTTATGCCATGGCAGTTGCGTACTTCTTCTTTGGCCA
CTGATTCTTACTTTCTCTTTCTGGTCAAATCTTCATTCTTTCAGACCTCTATGCTGGGTT
GAACATATGTCGTTGGACAATGAAACTGGATTAGACAAACCTGGAATAAGGGTCAGGTCA
GTCACAGGCCTTGTTGCAGCAGACTATTTCGTCCCTGGATATTTTGTTTGGGCTGTCTTA
ATTGCCAATTTAGCTCGTATTGGATATGAAGAAAAGACCATGTACATGGCTGCATATGAT
TGGAGGTTATCTTTCCAGAACACTGAGGTTCGTGATCAAACTTTGAGCAGAATAAAGAGC
AATATTGAACTCATGGTAGCAACAAATGGTGGAAATAGGGTGGTGGTGATCCCACACTCC
ATGGGGGTCCTCTATTTTCTGCATTTTATGAAATGGGTCGAAGCACCTCCTCCCATGGGG
GGCGGTGGTGGTCCGAACTGGTGTGAGAAGCATATTAAAGCTGTAATGAATATTGGAGGA
CCTTTCTTAGGAGTTCCCAAGGCTGTTGCTGGGCTTTTCTCATCTGAAGCCAAAGATGTT
GCCGTTGCTAGGTAATTTAAACAGAGTTTGCAACTTTTAGTAGGTATTTTCATGTTATCA
GGGTTGAAGTTTACTAGGTGATGCCTGCTGAGATAATATTGTTTCACAATGCTGTTCTTT
ATAAGATTGCATCCGAAATGTTTCGTTCTTTATCTATAGTAGTTAGCATATATCAGACTA
TAGTTTACATATTACTTTTGTTAATGTCATTTATCTATTTGCTTACTCAGTACCATTCTA
AATTGTGCTTATCGTTTCTGGACAATATCTGTATCTTATTTACTATAGCTCTGGCATTCT
GATTGCTGCTGTTACCTTACATATAATTAGCATCTAACCATGGTGATTGAGTTTATGCAA
GATCAAATGTTTTGTTTGAATTGACTATAATTACTAAAATCTGCTCTGTGATGAAGTTTG
TGGGGATCGAGTGGTACACAATCTAGCTTATTGGGGTCATTGCATAAAATCATTCTATAT
TAGCTGATATTTTTTCTCTTTAATATTCTATGATTTTTTGAAATGCATGTTGTTTTCCAT
TTTTCCATGTATGCAACTATTCTGGTTCAGGTATAAGGTAATTGATTCATTTATTAAAGC
AAAAGGGAATAACAAAAGAATGGAATATTATTCTGAAGTTGTAAAAATCATATATTCTCG
AAAAAGAAAAGAAGCGTTAAACATCATATTATGAATGGATGGAGTAACTTCTGAATTCAA
GGTATCACATCAATAATGCAATCATTCATTCCCTGAAACAAGCACAATTACTATCGCAAG
TCTAGGCATTTCTCAGTGACCTATCGTTGATTTCCTAAATTGGGCAGTAATACGTTCACA
TGGGTAAACTTGAGCTATGCTGGTCCTGTTATCCATCCTGAAAGGCTTTGTTGTTGTTGT
TGTTGGTCCTGTTATCCATCCTGAAATGGTACAGAAGTTATCCTTTTGTGCTTTGTTATC
CCACGAGTCATAATGTATGACAATATGACATGGCATGATGACAAAGTTATCCATATGTGA
TCTTAAATGAACCCAGACATTGTTTAGCATGTGGTTGTCCAGGGGTACCAATGTAAATGT
TTGGATTGTGTTTTCTGATTTCATTTCCAACATGAACTTGAGCTGCTGGATACCTTTGTA
TCTTGATTTTCTTATATTTAGTTGCACAAAGAAAATTGCTCTTAAAATTAGTTCCCAACT
AAATTTTGTTGTTTATGTACAGAGCTATCGCTCCTGATGTCCTGGACTCTGATTTTCTTG
GACTTCAAACTTTGCGCCATTTGATGCGTATGACCCGAACATGGGATTCAACAATGTCAA
TGCTTCCTAAAGGTGGTGATACAATTTGGGGAAATCTGGATTGGTCTCCAGAAGATGGCC
TTGAATGTAAAGCTAAGAAGCATAAAACCAATGATACCGAGGTTTCTAAGGATAGCAATG
GGGAAAATATCGAAGTTCAACCTGAACCTATAAACTACGGAAGGCTGGTATCCTTCGGTA
AAGATGTAGCAGAGGCACCTTCTTCAGAGATTGAACAGATAGAATTTCGTGATGCTGTTA
AAGGTAACGATATCGTCCATTCAAATGCATCATGCCGGGAGATCTGGACAGAGTACCATG
AATTAGGATGGGGTGGAATAAAGGCAGTCGCAGACTACAAAGTTTACACTGCCAGTTCTG
TTATAGACCTTCTTCACTTTGTTGCTCCAAGGATGATGCAGCGTGGAAATGTCCACTTTT
CATATGGAATTGCTGATAACTTGGATGATCCGAAATATCAACATTACAAATATTGGTCAA
ACCCCTTGGAAACAAAGCTACCGAATGCTCCTGACATGGAAATAATTTCCATGTACGGAG
TAGGCATTCCTACTGAAAGGGCATATGTCTACAAGTTGGCTCCACAGGCAGAGTGCTATA
TACCATTCCGGATTGACGCCTCGGCTGATGGCGGGGAGGAAAACAAATGCTTGAAAGGGG
GTGTTTACTTAGCTGACGGCGACGAAACTGTTCCAGTTCTTAGCGCGGGCTACATGTGTG
CAAAAGGGTGGCGTGGCAAAACTCGTTTCAACCCTGCCGGCAGCAAGACTTACGTGAGAG
AGTACAGCCATTCACCACCCTCAACTCTCCTGGAAGGCAGGGGCACTCAGAGCGGTGCAC
ATGTTGATATAATGGGGAACTTCGCTTTGATCGAGGACATCATCAGGATAGCTGCCGGGG
CAACCGGTGAGGAAATTGGTGGCGACCAGGTTTATTCAGATATATTCAAATGGTCAGAGA
AAATCAAATTGAAATTGTAACCCATGGGAAGTTAAAAGAAGTGCCCCAACCCGTTCATTG
CGTTCCTAAATGCTTGCCTGAGCGCAACTCTGGATTTTGCTTAAATATCGTATTTTTTTC
ACGCCTCATTCGTCCCTCTAGTAAATTTACATTGACAGGACCCCGGTGCGACGCGGATGT
TGTACCGTATTTTTGGCATTGTATATTAAAATGTACAGGCGTAAGTTACATTTGCTAGCT
GAAATTATTG