Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005821_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:189704144:189706705:-1 gene:Zm00001d005821 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flavonoid 3-monooxygenase
Sequence	ATGGAACAAGCTACATGGGCCGCGTTCCTCGGCATTGTCCTTTGCGCAGCGCTCTTCCAC AGGACCTTCCTTGCGCGCGGCCGGCGCCGGGCCAACAACCCCCCGCCCGGCCCCAAGCCA TGGCCGATCATCGGCAACCTAAACCTCGTGGGCGAGCTCCCCCACCGCTCCATGAACGAG CTCTCCAAGCGGTACGGTCCGCTCATGCAGCTCCGGTTCGGGTCGTTGCCTGTTGTCGTC GGCGCGTCGGTTGAGATGGCAAAGCTCTTCCTCAAGACCAATGACGCGGCGTTCTCCGAC CGGCCGAGGTTCGCAGTCGGCAAGTACATCGCGTACGACTTCTCCGAGGTTCGCCAGGCA CGTAGGATCTGCGCCACCGAGCTCTTCAGCGCCACGCGGCTCGAGTCATTCGAGCACATC CGCGACGAGGAGGTGCGCGTGATGCTGCAACAGCTGCGCCAAGCGGCTGGGCGCACCGTG CTGCTCAGGGACTACCTGCAGATGTTGACGCTCGGCGTGATCTCGCGCATAGTTCTGGGC AAGAAGTACGTCCAGGAGGAGGCGGCGGACGGTGAGGGGGACTCAGCGCCGGCGATGACG CCTGCCGAGTTCGGGGAGATGGTGGACGAGTTCTTGGTGCTTCACGGTGTGTTTAACATT GGTGATTACATCCCATGGCTAGATTGGCTGGACCTGCAGGGCTACGTTGCTAGGATGAAG AGAATGAAGGCGAGGTTTGGTCGACTCCTGGAACGACTCCTGGACGTGCACAACGAGCGG CGGCTACGCGAGGGAGGGAACTTCGTGGCAAAGGATATGTTGGACGTGCTGCTGCAGCTG GCCGATGATACTAGTCTTGAAGTCCAGCTCAACAGGGACAATGTTAAGGCTATCACACAG GACCTAATCATTGGAGGCACGGATACTAGTGCAAAGGCCCTGGAGTGGGCTGTCTCGGAG CTGCTCAAGAACCCCAAGGTCTTAGCCAAGGCCACAGAAGAGCTGGACCACGTCATAGGG CCGGACCGACTGGTGACAGAAAGCGACCTCCCTCGCCTCCCCTACATCGAGGCTGTGCTC AAGGAGACCCTGCGCCTGCACCCTGCCGCGCCGATGCTGGCACCCCACGTGGCCCGCGAG GACACATCCGTGGACGGCTACGACGTGCTCGCTGGCACGGTCGTGTTCATCAACGTGTGG GCAATCGGCCGCGACCCTGCGCTGTGGGACGCGCCGGAGGAGTTCCGGCCGGAGCGGTTC TTCGAGAGCAAGATCGGCGTGAGGGGCCATGACTTCCAGCTGCTGCCGTTCGGCTCTGGC CGGCGAATGTGCCCCGGGATCAACCTCGCGCTAAAGGTGATGGCTTTGACCCTTGCCAAT CTGCTTCACGGCTTCAAGTGGAGGCTTCCGGACGGCGTGACGGCGGAGGAGCTGAGCATG GAGGAGGCCTTCCAGCTCACGGTACCGCGTAAGTTCCCGCTCGAGGCCGTGGTCGAGCCC AGGTTGCCAGACCGCCTGTATACGGGCGCTTGA

Peptide Sequence

PEP ID	Zm00001d005821_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:189704144:189706705:-1 gene:Zm00001d005821 transcript:Zm00001d005821_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flavonoid 3-monooxygenase
Sequence	MEQATWAAFLGIVLCAALFHRTFLARGRRRANNPPPGPKPWPIIGNLNLVGELPHRSMNE LSKRYGPLMQLRFGSLPVVVGASVEMAKLFLKTNDAAFSDRPRFAVGKYIAYDFSEVRQA RRICATELFSATRLESFEHIRDEEVRVMLQQLRQAAGRTVLLRDYLQMLTLGVISRIVLG KKYVQEEAADGEGDSAPAMTPAEFGEMVDEFLVLHGVFNIGDYIPWLDWLDLQGYVARMK RMKARFGRLLERLLDVHNERRLREGGNFVAKDMLDVLLQLADDTSLEVQLNRDNVKAITQ DLIIGGTDTSAKALEWAVSELLKNPKVLAKATEELDHVIGPDRLVTESDLPRLPYIEAVL KETLRLHPAAPMLAPHVAREDTSVDGYDVLAGTVVFINVWAIGRDPALWDAPEEFRPERF FESKIGVRGHDFQLLPFGSGRRMCPGINLALKVMALTLANLLHGFKWRLPDGVTAEELSM EEAFQLTVPRKFPLEAVVEPRLPDRLYTGA

Transcript Sequence

Transcript ID	Zm00001d005821_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:189704144:189706705:-1 gene:Zm00001d005821 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flavonoid 3-monooxygenase
Sequence	AGGTAAACCAGTCACTCTACTACTCGATGGAACAAGCTACATGGGCCGCGTTCCTCGGCA TTGTCCTTTGCGCAGCGCTCTTCCACAGGACCTTCCTTGCGCGCGGCCGGCGCCGGGCCA ACAACCCCCCGCCCGGCCCCAAGCCATGGCCGATCATCGGCAACCTAAACCTCGTGGGCG AGCTCCCCCACCGCTCCATGAACGAGCTCTCCAAGCGGTACGGTCCGCTCATGCAGCTCC GGTTCGGGTCGTTGCCTGTTGTCGTCGGCGCGTCGGTTGAGATGGCAAAGCTCTTCCTCA AGACCAATGACGCGGCGTTCTCCGACCGGCCGAGGTTCGCAGTCGGCAAGTACATCGCGT ACGACTTCTCCGAGGTTCGCCAGGCACGTAGGATCTGCGCCACCGAGCTCTTCAGCGCCA CGCGGCTCGAGTCATTCGAGCACATCCGCGACGAGGAGGTGCGCGTGATGCTGCAACAGC TGCGCCAAGCGGCTGGGCGCACCGTGCTGCTCAGGGACTACCTGCAGATGTTGACGCTCG GCGTGATCTCGCGCATAGTTCTGGGCAAGAAGTACGTCCAGGAGGAGGCGGCGGACGGTG AGGGGGACTCAGCGCCGGCGATGACGCCTGCCGAGTTCGGGGAGATGGTGGACGAGTTCT TGGTGCTTCACGGTGTGTTTAACATTGGTGATTACATCCCATGGCTAGATTGGCTGGACC TGCAGGGCTACGTTGCTAGGATGAAGAGAATGAAGGCGAGGTTTGGTCGACTCCTGGAAC GACTCCTGGACGTGCACAACGAGCGGCGGCTACGCGAGGGAGGGAACTTCGTGGCAAAGG ATATGTTGGACGTGCTGCTGCAGCTGGCCGATGATACTAGTCTTGAAGTCCAGCTCAACA GGGACAATGTTAAGGCTATCACACAGGACCTAATCATTGGAGGCACGGATACTAGTGCAA AGGCCCTGGAGTGGGCTGTCTCGGAGCTGCTCAAGAACCCCAAGGTCTTAGCCAAGGCCA CAGAAGAGCTGGACCACGTCATAGGGCCGGACCGACTGGTGACAGAAAGCGACCTCCCTC GCCTCCCCTACATCGAGGCTGTGCTCAAGGAGACCCTGCGCCTGCACCCTGCCGCGCCGA TGCTGGCACCCCACGTGGCCCGCGAGGACACATCCGTGGACGGCTACGACGTGCTCGCTG GCACGGTCGTGTTCATCAACGTGTGGGCAATCGGCCGCGACCCTGCGCTGTGGGACGCGC CGGAGGAGTTCCGGCCGGAGCGGTTCTTCGAGAGCAAGATCGGCGTGAGGGGCCATGACT TCCAGCTGCTGCCGTTCGGCTCTGGCCGGCGAATGTGCCCCGGGATCAACCTCGCGCTAA AGGTGATGGCTTTGACCCTTGCCAATCTGCTTCACGGCTTCAAGTGGAGGCTTCCGGACG GCGTGACGGCGGAGGAGCTGAGCATGGAGGAGGCCTTCCAGCTCACGGTACCGCGTAAGT TCCCGCTCGAGGCCGTGGTCGAGCCCAGGTTGCCAGACCGCCTGTATACGGGCGCTTGAT CGATGCCCGTACCTGTGTTGGACACTTGGACTGTTGGCATGTGTGGAGCACAGCACGTGA TTGTTCAGCTCTTGGAAAATTAATGTTGTGTCTCGTATACAAATTAATTATGGTAGTGCA TATATAATGCACGGTTTGTGAGAGTTTGATGTTTCAGATCTATACGTTGAATTAGGCCTT TATGCCTTGTTCGGTTATTC