Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005785_T019
CDS Infomation	cds chromosome:B73_RefGen_v4:2:188375291:188393203:1 gene:Zm00001d005785 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGAGGAGGTGGAAGCAGCGCGGCGTCGTGTGCGTGGGGGCGGGTTGCTCAACACCATC GTCATGAACGCGGTTCTCGAGGCATGTGTGCGCTGCGGCGACGTCGACCGAGCGCTCCGG CTCTTCGAGGAAATGCGCGGGCCCATGGGGTGCGGAGTCGACGATGTTTCCTACGGCATC CTGCTGAAGGGCCTGGGTATAGCAAGAAGGATTGATGAAGCATTCGAAATACTGGAATCA ATTGAGAAAGATTCTTCTATTGGGGGGCCCAGGCTCTCTCCTCATCTCATTTGTGGTTTT CTAAATGCCCTTATCGAAGCAGGAGATATGAGGCGTGCCAATGCTCTTGTCGCCCGTTTC CGCATGGTCCTTTACGAGGATCACTCTGTCTTACTATACAACTTACTGATGAAGGGGTAT ATTAAGAGCAACTTCCCTCTCGGAGCTTTGACTGTTAAAGACGAGATATTGCGTCAAGGG TTGAAGCCTGATAGATTGACCTACAATACCATCATTTCTGCCTGTGTAAAATCAGCAGAG AATGATAAAGCTATCCAATTTCTTGAAGATATGAAGGAAGAAGCTAATACAGAAAGTAAC CCTGAACTTCTTCCAGATGCTGTTACCTACACAACATTACTCAAGGGTTTAGGAAATAGC CGTGACCTTTATTCAGTCGTGAAGATTGTTGTGGAGATGAAATCTTCACTAATTTCAATC GACAGGACTGCATACACTGCTATGGTAGATGCTTTGCTAGCTTGTGGGTCCATCGACGGG GCCCTTTGCATTTTTGGTGATATAATAAAGCATGCTGGCAAGAACAATGATTTGAGACCT AAACCTCATCTTTATCTTTCAATCATGAGAGCTTTTGCTACCAGAGGTGATGTTGATATG GTCATGAGATTTAACAAGCGCATGTGGCTGGATTCAGTTGGATCAATTAGCCGTGCCGCC AAAGAAGAGACACATGAGCTATTAATGGAAGCTGCCATAAATAATAATCAGATAGATTTG GCTAGAGGGCTTCTAAGAAGAATAGTAAATGAGAAAGAATGTTTCTCTTGGACAAGTAGA GTAGGCCTGGTCGCAGTTAAAGTTGAAAGCTTATCTGGATTCACCAACTCTCTTCTAAGG CCCCACGTATTTCCACAGATTATCTTGAATGATCCAGTTGAGAAGTATATGGTTCCATTT CAAGAATCTCGACCATTACCCGCCGACTTAATATTGCGGAAGGTTGTGATGCGTTTGTTG AAAGAGCGTGCAGTTCCTCTTGTGGATGATTGGGGAGGATGCATTGGCATAGTTCACCGC GATGATTGTACCAAGCTGGACGCACCTCTTATTTCAATGTCTAGAGGGCCACCTCTGTGC GTACCTACTTCAACCACCGTGGAGCACGTCATTGACCTCCTCCTGAGAAACAAGTCCGAG ATGGTGATCGTGGTGAAGAGTGGTAACATGTACGAAGGCAGCTACACATCCAGCTCAAGA CCCTTGGGCGTTTTCTCCCTCGCCATACTATGGAGCTTCACCGGCGACTACTCGTCAGGA TCAGATGATGTCCCCGACGCAGGCATCTCCCGGGCAGCAAAACCCAAACCAGACGCCGAG GCCTGCAACCACAGCTAG

Peptide Sequence

PEP ID	Zm00001d005785_P019
PEP Infomation	pep chromosome:B73_RefGen_v4:2:188375291:188393203:1 gene:Zm00001d005785 transcript:Zm00001d005785_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MEEVEAARRRVRGGGLLNTIVMNAVLEACVRCGDVDRALRLFEEMRGPMGCGVDDVSYGI LLKGLGIARRIDEAFEILESIEKDSSIGGPRLSPHLICGFLNALIEAGDMRRANALVARF RMVLYEDHSVLLYNLLMKGYIKSNFPLGALTVKDEILRQGLKPDRLTYNTIISACVKSAE NDKAIQFLEDMKEEANTESNPELLPDAVTYTTLLKGLGNSRDLYSVVKIVVEMKSSLISI DRTAYTAMVDALLACGSIDGALCIFGDIIKHAGKNNDLRPKPHLYLSIMRAFATRGDVDM VMRFNKRMWLDSVGSISRAAKEETHELLMEAAINNNQIDLARGLLRRIVNEKECFSWTSR VGLVAVKVESLSGFTNSLLRPHVFPQIILNDPVEKYMVPFQESRPLPADLILRKVVMRLL KERAVPLVDDWGGCIGIVHRDDCTKLDAPLISMSRGPPLCVPTSTTVEHVIDLLLRNKSE MVIVVKSGNMYEGSYTSSSRPLGVFSLAILWSFTGDYSSGSDDVPDAGISRAAKPKPDAE ACNHS

Transcript Sequence

Transcript ID	Zm00001d005785_T019
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:188375291:188393203:1 gene:Zm00001d005785 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	TCGCGCCGCAGACAGTGCTCGCGAAACGAGCGTTCGGCGGCAACGGCAGCGGCCAGCCGT GAGAGAAGAGATGATGCTGATAAGGCCGCCGCGGTTTCTCTCCCCTTCGCCCTCGCCAGG GACACGCGAGCCCCGCCTTCGCCGGCCTCTCGATGCCTCCAGAATCTTCTCCTCCCCTCG TCCTCCCGGTCGCCGTTCCCGCCCCCGCCCCCGGCTCGTCTCTCCGTCCACCGATCTCCG CCGCCTCACTGCCCGCATCGTCGACCTCACCCGCCGCAGGCAGCTCGCCCAAGTTTGCCT CGCCTGCTCTCCTTCCCAATCCACTCCTCCGGCAGTCGGATTGCTCTATTTTTTGCAGTG CCGAGTGCTGACCTGAGGTGTGCGGCGCAGATCATGGAGGAGGTGGAAGCAGCGCGGCGT CGTGTGCGTGGGGGCGGGTTGCTCAACACCATCGTCATGAACGCGGTTCTCGAGGCATGT GTGCGCTGCGGCGACGTCGACCGAGCGCTCCGGCTCTTCGAGGAAATGCGCGGGCCCATG GGGTGCGGAGTCGACGATGTTTCCTACGGCATCCTGCTGAAGGGCCTGGGTATAGCAAGA AGGATTGATGAAGCATTCGAAATACTGGAATCAATTGAGAAAGATTCTTCTATTGGGGGG CCCAGGCTCTCTCCTCATCTCATTTGTGGTTTTCTAAATGCCCTTATCGAAGCAGGAGAT ATGAGGCGTGCCAATGCTCTTGTCGCCCGTTTCCGCATGGTCCTTTACGAGGATCACTCT GTCTTACTATACAACTTACTGATGAAGGGGTATATTAAGAGCAACTTCCCTCTCGGAGCT TTGACTGTTAAAGACGAGATATTGCGTCAAGGGTTGAAGCCTGATAGATTGACCTACAAT ACCATCATTTCTGCCTGTGTAAAATCAGCAGAGAATGATAAAGCTATCCAATTTCTTGAA GATATGAAGGAAGAAGCTAATACAGAAAGTAACCCTGAACTTCTTCCAGATGCTGTTACC TACACAACATTACTCAAGGGTTTAGGAAATAGCCGTGACCTTTATTCAGTCGTGAAGATT GTTGTGGAGATGAAATCTTCACTAATTTCAATCGACAGGACTGCATACACTGCTATGGTA GATGCTTTGCTAGCTTGTGGGTCCATCGACGGGGCCCTTTGCATTTTTGGTGATATAATA AAGCATGCTGGCAAGAACAATGATTTGAGACCTAAACCTCATCTTTATCTTTCAATCATG AGAGCTTTTGCTACCAGAGGTGATGTTGATATGGTCATGAGATTTAACAAGCGCATGTGG CTGGATTCAGTTGGATCAATTAGCCGTGCCGCCAAAGAAGAGACACATGAGCTATTAATG GAAGCTGCCATAAATAATAATCAGATAGATTTGGCTAGAGGGCTTCTAAGAAGAATAGTA AATGAGAAAGAATGTTTCTCTTGGACAAGTAGAGTAGGCCTGGTCGCAGTTAAAGTTGAA AGCTTATCTGGATTCACCAACTCTCTTCTAAGGCCCCACGTATTTCCACAGATTATCTTG AATGATCCAGTTGAGAAGTATATGGTTCCATTTCAAGAATCTCGACCATTACCCGCCGAC TTAATATTGCGGAAGGTTGTGATGCGTTTGTTGAAAGAGCGTGCAGTTCCTCTTGTGGAT GATTGGGGAGGATGCATTGGCATAGTTCACCGCGATGATTGTACCAAGCTGGACGCACCT CTTATTTCAATGTCTAGAGGGCCACCTCTGTGCGTACCTACTTCAACCACCGTGGAGCAC GTCATTGACCTCCTCCTGAGAAACAAGTCCGAGATGGTGATCGTGGTGAAGAGTGGTAAC ATGTACGAAGGCAGCTACACATCCAGCTCAAGACCCTTGGGCGTTTTCTCCCTCGCCATA CTATGGAGCTTCACCGGCGACTACTCGTCAGGATCAGATGATGTCCCCGACGCAGGCATC TCCCGGGCAGCAAAACCCAAACCAGACGCCGAGGCCTGCAACCACAGCTAGTTTGGTGTT TCTTTTGCTCAGCTTATAGCAACTCCGCGTCGTGTTGCCGGGCAAACTAGTCATGTAATG GTCCTCCAGTTGGACAAGGGGTGCATGCGAAAAAAGGTTTTGATCCTGACCTGCTGTGGC TGCGTGCTGCGTACGATGTCTTCTGATGCACAGAGCGAAAGTGACAGTGGACTGGAGATT TCCTCCCAGCCTTCGGTTGAGGCGCCCCACCGCGCAGTGATGGTCCTGAGTCCTGACCGG TTTGGTGGCATGTGGCATCCCTGCTCTCACTCACGGTGCCGTTTTCCGATCAGTAATTGG TAATCCCCTTGGTAACTAATTTGGGTCTATGCTAAGATGTTCACCGATCAGTAGTACTGT GCGCAGTGTATTGCTGCTGCCTGATGCTGGGACTGGGATACAGAATCCTCCTGTTGCCGT GCACAGTTGCTCTTATCTTCTGTGAACCTTCAGTATGGACTGGCAGGACAGTGGATATGT GTCGATGAACGGCCCGAGCACTCCGTTGGGGCCCCGCTTGGACGCCTCATGCCATAGGCC ACAGGCCATAGCTAGCATTATCTGCCTTCTGGGAGGTGCATGTGCAGTGCATCTACCCAT CTGGGAAGCGGTAGGTTTCCATTGGAGGGCTCTTTGCCTCTTTGGTAGTTTGGTCCCTGT TGTGTCATGCCAGGGTGTGGCACTGTTACGCTCGAAAGTCGAGAGATTTCTGGGTGGGTA GCTTGGGTAGGCCTGGGTGCTTCTGCCCCCTTGTCCAGGAGTGTCTCGGTCCAGCTTTGC ATCATCCGTGTTAGTTGGACCGGTGTCACTACCCGGCAGTGACGGCTGGCGCCTGGCGCT CGTACTCGGGGTGGCCCGCCAGCGGCCGGGTGATTATTGCTGCCTGAAAGCATGGAATAA TAAGGGCCTTAATTTCAATCCACGTGGATCGAGGATCGAAGGGGTTAAGGGTTTGTAAGT ATTGAGAAGGATTGAAGGGATTAAATGTCTTCCAATTCAAAATTAAATAGAAGATGATTT AATCTCTATAAATCACCTTCGATCTCTGTGTGGCCAAGTAGGTTTAAATTCGTAGCATGT CAAAACCTTTGTTCATTCCTTCTCATCTATGTAAGGGCACGTACAATGGTATTTAATGTA GAGATTTTTGATGTGTCTAAAGAGGGTTTTTGCAAAAAAAAAATGTGAAGATGTCTCTGT CTTTGTAACCCAAGTATTAACAGATGTCTCAATTTCTACTGTACGAATTCGTCGTTTGTT CTATCGATCCGATGCTATACAAGCGCATATATTT