Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005775_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:2:187822656:187827500:1 gene:Zm00001d005775 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellulose synthase A catalytic subunit 7 [UDP-forming]
Sequence	ATGGAGGCCAACGCCGGGCTTGTGGCCGGCTCGCACAACCGGAACGAGCTGGTGCTCATC CGGGGCCACGAGGACCCCAAGCCGCTGCGGGCGCTGAGCGGGCAGGTGTGCGAGATATGC GGCGACGAGGTCGGGCTCACGGTGGACGGCGACCTCTTCGTGGCCTGCAACGAGTGCGGC TTCCCCGTCTGCCGGCCCTGCTACGAGTACGAGCGCCGGGAGGGCACGCAGAACTGCCCC CAGTGCAAGACGCGCTACAAGCGCCTCAAGGGGAGCCCGAGGGTCGCCGGGGACGATGAC GAGGAGGACATCGACGACCTGGAGCACGAGTTCAACATCGACGATGAGAAGCAGAGGCAG CTGGAGGGCAACATGCAGAACAGCCAGATCACCGAGGCCATGCTGCACGGCAAGATGAGC TACGGGAGGGGGGCCGACGACGGCGAGGGCAACAACACACCGCAGATGCCGCCCATCATC ACCGGCGCCCGCTCCGTGCCGGTGAGCGGTGAGTTTCCAATCACAAACGGGTATGGCCAC GGCGAGCTCTCGTCTTCCCTGCACAAGCGCATCCATCCCTACCCTGTGTCTGAGCCAGGG AGCGCCAAGTGGGACGAGAAGAAAGAAGTGAGCTGGAAGGAGAGGATGGACGACTGGAAG TCCAAGCAGGGCATCCTCGGCGGCGGCGGCGGCGATCCCGAAGACATGGACGCCGACGTG CCGCTGAACGACGAGGCGAGGCAGCCGCTGTCGCGCAAGGTGTCGATCGCGTCGAGCAAG GTGAACCCGTACCGGATGGTCATCGTGGTGCGTCTCGTCGTCCTCGCCTTCTTCCTCCGC TACCGCATCCTGCACCCCGTCCCGGACGCCATCGGGCTGTGGCTCGTCTCCATCATCTGC GAGATCTGGTTCGCCGTGTCCTGGATCCTGGACCAGTTCCCCAAGTGGTTCCCCATCGAC CGCGAGACGTACCTGGACCGCCTCACCCTCAGGTACGAGAGGGAAGGGGAGCCGTCGCTG CTGTCGTCGGTGGACCTGTTCGTCAGCACGGTGGACCCGCTCAAGGAGCCGCCGCTGGTC ACCGCCAACACCGTGCTCTCCATCCTCGCCGTGGACTACCCCGTGGACAAGGTCTCCTGC TACGTCTCCGACGACGGCGCGTCGATGCTCACGTTCGAGGCGCTGTCGGAGACGGCCGAG TTCGCGCGGAAGTGGGTGCCGTTCTGCAAGAAGTTCTGCATCGAGCCCCGCGCCCCGGAG TTCTACTTCTCGCTCAAGGTGGACTACCTCAAGGACAAGGTGCAGCCCACCTTCGTGCAG GAGCGCCGCGCCATGAAGAGAGAGTACGAGGAGTTCAAGGTCCGCATCAACGCGCTGGTG GCCAAGGCCATGAAGGTGCCGGCAGAGGGGTGGATCATGAAGGACGGCACGCCGTGGCCC GGGAACAACACCCGCGACCACCCTGGCATGATCCAGGTGTTCCTGGGCCACAGCGGCGGC CACGACACCGAGGGCAACGAGCTGCCCCGCCTCGTGTACGTCTCCCGTGAGAAGCGCCCG GGCTTCCAGCACCACAAGAAGGCCGGCGCCATGAACGCTCTGATCCGCGTCTCCGCCGTG CTGACCAACGCGCCCTTCATGCTCAACTTGGACTGTGATCACTACATCAACAACAGCAAG GCCATCCGGGAGGCCATGTGCTTCCTCATGGACCCTCAGGTCGGCCGGAAGGTCTGCTAC GTGCAGTTCCCTCAGAGGTTCGACGGCATCGACATGCACGACCGATACGCGAACAGGAAC ACCGTCTTCTTCGACATCAACATGAAGGGGCTGGACGGCATCCAGGGCCCGGTCTACGTC GGGACAGGGTGCGTGTTCCGGCGCCAGGCGCTCTACGGCTACAACCCTCCCAAGGGCCCC AAGAGGCCAAAGATGGTGACCTGCGACTGCTGCCCGTGCTTCGGCCGCAAGAAGCGGAAG GACGCCAAGGATGGGCTGCCGGAGGGCACCGCGGATATCGGAGTGGACAGCGACAAGGAG ATGCTCATGTCCCAGATGAACTTCGAGAAGCGGTTCGGGCAGTCCGCGGCGTTCGTCACG TCCACGCTCATGGAGGAAGGTGGCGTCCCGCCGTCGTCGAGCCCCGCTGCGCTCCTCAAG GAGGCCATCCACGTCATCAGCTGCGGCTACGAGGACAAGACCGACTGGGGCCTGGAGCTG GGGTGGATCTACGGGTCCATCACGGAGGACATCCTGACGGGGTTCAAGATGCACTGCCGC GGGTGGCGCTCGGTGTACTGCATGCCGAAGCGGGCGGCGTTCAAGGGGTCGGCGCCGATC AACCTGTCCGACCGTCTCAACCAGGTGCTCCGGTGGGCGCTGGGGTCCGTCGAGATCTTC TTCAGCCGGCACAGCCCCCTGCTGTACGGCTACAAGAACGGCAACCTCAAGTGGCTGGAG CGCTTCGCCTACATCAACACCACCATCTACCCCTTCACCTCGCTCCCGCTGCTCGCCTAC TGTACCCTGCCAGCCGTCTGCCTCCTCACCGGCAAGTTCATCATGCCGTCGATCAGCACG TTCGCCAGCCTCTTCTTCATCGCCCTCTTCATGTCCATCTTCGCCACGGGCATCCTGGAG ATGCGGTGGAGCGGGGTGAGCATCGAGGAGTGGTGGAGGAACGAGCAGTTCTGGGTCATC GGCGGCGTGTCCGCGCACCTCTTCGCCGTCGTGCAGGGCCTGCTCAAGGTCCTGGCCGGG ATCGACACCAACTTCACCGTCACATCCAAGGCCACCGGCGACGAGGACGACGAGTTCGCC GAGCTCTACGCGTTCAAGTGGACCACGCTCCTCATCCCGCCCACCACGCTGCTCATCATC AACATCATCGGCGTCGTGGCCGGCATCTCCGACGCCATCAACAACGGGTACCAGTCGTGG GGCCCGCTCTTCGGCAAGCTCTTCTTCGCGTTCTGGGTCATCGTCCACCTCTACCCGTTC CTCAAGGGGCTCATGGGGCGCCAGAACCGGACGCCCACCATTGTCGTCATCTGGTCCGTG CTGCTGGCCTCCATCTTCTCCCTGCTCTGGGTCAGGATCGATCCCTTCATCGTCAGGACC AAGGGGCCCGACGTCAGGCAGTGTGGCATCAACTGCTGA

Peptide Sequence

PEP ID	Zm00001d005775_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:2:187822656:187827500:1 gene:Zm00001d005775 transcript:Zm00001d005775_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellulose synthase A catalytic subunit 7 [UDP-forming]
Sequence	MEANAGLVAGSHNRNELVLIRGHEDPKPLRALSGQVCEICGDEVGLTVDGDLFVACNECG FPVCRPCYEYERREGTQNCPQCKTRYKRLKGSPRVAGDDDEEDIDDLEHEFNIDDEKQRQ LEGNMQNSQITEAMLHGKMSYGRGADDGEGNNTPQMPPIITGARSVPVSGEFPITNGYGH GELSSSLHKRIHPYPVSEPGSAKWDEKKEVSWKERMDDWKSKQGILGGGGGDPEDMDADV PLNDEARQPLSRKVSIASSKVNPYRMVIVVRLVVLAFFLRYRILHPVPDAIGLWLVSIIC EIWFAVSWILDQFPKWFPIDRETYLDRLTLRYEREGEPSLLSSVDLFVSTVDPLKEPPLV TANTVLSILAVDYPVDKVSCYVSDDGASMLTFEALSETAEFARKWVPFCKKFCIEPRAPE FYFSLKVDYLKDKVQPTFVQERRAMKREYEEFKVRINALVAKAMKVPAEGWIMKDGTPWP GNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAV LTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQVGRKVCYVQFPQRFDGIDMHDRYANRN TVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVTCDCCPCFGRKKRK DAKDGLPEGTADIGVDSDKEMLMSQMNFEKRFGQSAAFVTSTLMEEGGVPPSSSPAALLK EAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPI NLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFAYINTTIYPFTSLPLLAY CTLPAVCLLTGKFIMPSISTFASLFFIALFMSIFATGILEMRWSGVSIEEWWRNEQFWVI GGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLII NIIGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSV LLASIFSLLWVRIDPFIVRTKGPDVRQCGINC

Transcript Sequence

Transcript ID	Zm00001d005775_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:187822656:187827500:1 gene:Zm00001d005775 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellulose synthase A catalytic subunit 7 [UDP-forming]
Sequence	AGCAGCATAGCAATAGCATCAGGCGCAAGCCAGCGCAGGCGGCTTTCGCTTCACTTAGCG GCAACGGGGACGCAGCGCCCGCACCCAACCAACACGAGCTCCTCTCCTCACCCGCCGCGA CACGCGCGCGGCTCCAACGCCTCCATCTCCATCGCGCGCACCAAATCGCACTCCGTCCGC CCCGTCGATCGAACAGCCACCGCTCACCTCTCTCACCCGCCAAAACCTCCTCCCCTGGCC TCCTCTCATACTCATATAGCTGAGCAGCCCCTGCCACAAGGTAGAGCATCGCTCACACCT GCGTCGCCCTGCCTTGCCATCGCGATCGAGCACCTGAGGGATCGATCGGAGGCCAAGAGC TAGCTAGCACGCCGGCCTCCGCTCGCCGGTGCCGCGCGCGATGGAGGCCAACGCCGGGCT TGTGGCCGGCTCGCACAACCGGAACGAGCTGGTGCTCATCCGGGGCCACGAGGACCCCAA GCCGCTGCGGGCGCTGAGCGGGCAGGTGTGCGAGATATGCGGCGACGAGGTCGGGCTCAC GGTGGACGGCGACCTCTTCGTGGCCTGCAACGAGTGCGGCTTCCCCGTCTGCCGGCCCTG CTACGAGTACGAGCGCCGGGAGGGCACGCAGAACTGCCCCCAGTGCAAGACGCGCTACAA GCGCCTCAAGGGGAGCCCGAGGGTCGCCGGGGACGATGACGAGGAGGACATCGACGACCT GGAGCACGAGTTCAACATCGACGATGAGAAGCAGAGGCAGCTGGAGGGCAACATGCAGAA CAGCCAGATCACCGAGGCCATGCTGCACGGCAAGATGAGCTACGGGAGGGGGGCCGACGA CGGCGAGGGCAACAACACACCGCAGATGCCGCCCATCATCACCGGCGCCCGCTCCGTGCC GGTGAGCGGTGAGTTTCCAATCACAAACGGGTATGGCCACGGCGAGCTCTCGTCTTCCCT GCACAAGCGCATCCATCCCTACCCTGTGTCTGAGCCAGGGAGCGCCAAGTGGGACGAGAA GAAAGAAGTGAGCTGGAAGGAGAGGATGGACGACTGGAAGTCCAAGCAGGGCATCCTCGG CGGCGGCGGCGGCGATCCCGAAGACATGGACGCCGACGTGCCGCTGAACGACGAGGCGAG GCAGCCGCTGTCGCGCAAGGTGTCGATCGCGTCGAGCAAGGTGAACCCGTACCGGATGGT CATCGTGGTGCGTCTCGTCGTCCTCGCCTTCTTCCTCCGCTACCGCATCCTGCACCCCGT CCCGGACGCCATCGGGCTGTGGCTCGTCTCCATCATCTGCGAGATCTGGTTCGCCGTGTC CTGGATCCTGGACCAGTTCCCCAAGTGGTTCCCCATCGACCGCGAGACGTACCTGGACCG CCTCACCCTCAGGTACGAGAGGGAAGGGGAGCCGTCGCTGCTGTCGTCGGTGGACCTGTT CGTCAGCACGGTGGACCCGCTCAAGGAGCCGCCGCTGGTCACCGCCAACACCGTGCTCTC CATCCTCGCCGTGGACTACCCCGTGGACAAGGTCTCCTGCTACGTCTCCGACGACGGCGC GTCGATGCTCACGTTCGAGGCGCTGTCGGAGACGGCCGAGTTCGCGCGGAAGTGGGTGCC GTTCTGCAAGAAGTTCTGCATCGAGCCCCGCGCCCCGGAGTTCTACTTCTCGCTCAAGGT GGACTACCTCAAGGACAAGGTGCAGCCCACCTTCGTGCAGGAGCGCCGCGCCATGAAGAG AGAGTACGAGGAGTTCAAGGTCCGCATCAACGCGCTGGTGGCCAAGGCCATGAAGGTGCC GGCAGAGGGGTGGATCATGAAGGACGGCACGCCGTGGCCCGGGAACAACACCCGCGACCA CCCTGGCATGATCCAGGTGTTCCTGGGCCACAGCGGCGGCCACGACACCGAGGGCAACGA GCTGCCCCGCCTCGTGTACGTCTCCCGTGAGAAGCGCCCGGGCTTCCAGCACCACAAGAA GGCCGGCGCCATGAACGCTCTGATCCGCGTCTCCGCCGTGCTGACCAACGCGCCCTTCAT GCTCAACTTGGACTGTGATCACTACATCAACAACAGCAAGGCCATCCGGGAGGCCATGTG CTTCCTCATGGACCCTCAGGTCGGCCGGAAGGTCTGCTACGTGCAGTTCCCTCAGAGGTT CGACGGCATCGACATGCACGACCGATACGCGAACAGGAACACCGTCTTCTTCGACATCAA CATGAAGGGGCTGGACGGCATCCAGGGCCCGGTCTACGTCGGGACAGGGTGCGTGTTCCG GCGCCAGGCGCTCTACGGCTACAACCCTCCCAAGGGCCCCAAGAGGCCAAAGATGGTGAC CTGCGACTGCTGCCCGTGCTTCGGCCGCAAGAAGCGGAAGGACGCCAAGGATGGGCTGCC GGAGGGCACCGCGGATATCGGAGTGGACAGCGACAAGGAGATGCTCATGTCCCAGATGAA CTTCGAGAAGCGGTTCGGGCAGTCCGCGGCGTTCGTCACGTCCACGCTCATGGAGGAAGG TGGCGTCCCGCCGTCGTCGAGCCCCGCTGCGCTCCTCAAGGAGGCCATCCACGTCATCAG CTGCGGCTACGAGGACAAGACCGACTGGGGCCTGGAGCTGGGGTGGATCTACGGGTCCAT CACGGAGGACATCCTGACGGGGTTCAAGATGCACTGCCGCGGGTGGCGCTCGGTGTACTG CATGCCGAAGCGGGCGGCGTTCAAGGGGTCGGCGCCGATCAACCTGTCCGACCGTCTCAA CCAGGTGCTCCGGTGGGCGCTGGGGTCCGTCGAGATCTTCTTCAGCCGGCACAGCCCCCT GCTGTACGGCTACAAGAACGGCAACCTCAAGTGGCTGGAGCGCTTCGCCTACATCAACAC CACCATCTACCCCTTCACCTCGCTCCCGCTGCTCGCCTACTGTACCCTGCCAGCCGTCTG CCTCCTCACCGGCAAGTTCATCATGCCGTCGATCAGCACGTTCGCCAGCCTCTTCTTCAT CGCCCTCTTCATGTCCATCTTCGCCACGGGCATCCTGGAGATGCGGTGGAGCGGGGTGAG CATCGAGGAGTGGTGGAGGAACGAGCAGTTCTGGGTCATCGGCGGCGTGTCCGCGCACCT CTTCGCCGTCGTGCAGGGCCTGCTCAAGGTCCTGGCCGGGATCGACACCAACTTCACCGT CACATCCAAGGCCACCGGCGACGAGGACGACGAGTTCGCCGAGCTCTACGCGTTCAAGTG GACCACGCTCCTCATCCCGCCCACCACGCTGCTCATCATCAACATCATCGGCGTCGTGGC CGGCATCTCCGACGCCATCAACAACGGGTACCAGTCGTGGGGCCCGCTCTTCGGCAAGCT CTTCTTCGCGTTCTGGGTCATCGTCCACCTCTACCCGTTCCTCAAGGGGCTCATGGGGCG CCAGAACCGGACGCCCACCATTGTCGTCATCTGGTCCGTGCTGCTGGCCTCCATCTTCTC CCTGCTCTGGGTCAGGATCGATCCCTTCATCGTCAGGACCAAGGGGCCCGACGTCAGGCA GTGTGGCATCAACTGCTGAGCTGTCTATCACGGTTCAAAAAAGTTCTAGAGCTTGTGCAT AGGGGAGAAACAACAGTTTAGAAATTTTGTATTGTCATGTTTTGGAGCTCATACGCTACG TTTTGTGTAATGTTCTTGGACCCAGAATTGTCGGACGAGGAATTGAACAAAGGACAAGGT TTGAATGAATGTTAAATAGCAAATGATATTCC