Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005751_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:186191042:186194061:1 gene:Zm00001d005751 gene_biotype:protein_coding transcript_biotype:protein_coding description:Golgi SNAP receptor complex member 1

Sequence

ATGGAGGCGTCTTCCTGGGACGCCGTTCGCAAGCAGGCAAGGAGGTTGGAAGCTCAGTTA
GATGACCAAATGATTGCATACCGTAAATTGGTTTCTATGAAATCAGACGGTTCAGAGGAC
AACATTGAGTCTGATATAGAAAGATCACTGAAGCAGTTACAGCAAGTGAATTCGCAAATG
CAAACTTGGGTATCATCAGGAGGTTCTGAAGTTCTTTCTCATACTCTGACTCGTCATATG
GAGATTTTGCAAGACCTTACTCAGGAATTCTATCGGCTTCGATCAAGTCTCAGGGCAAAA
CAACAGCATACTTCTCTCCTTGACTTGAGAGATTTTGACAGAGCAAAGTTTGATGTTGAG
GAGCCGTCAGACTCAGCTGATCAAGTTCTTCTCAGGGAACAAGCTGCGATTGGCAGGAGT
ACTGGACAGATGGATAACGTGATATCACAAGCTCAGGCAACACTTGGTTCTCTCATGACC
CAACGGTCAACATTCGGTGGCATCACTACAAAGATAAGCAACGTCAGCAGCCAGCTTCCA
ACAATTAACCACGTCCTCTCATCGATCAGAAGGAAGAAATCCATGGATACCATCATTCTT
TCGCTCGTTGCATCTGTCTGCACGTTTCTCATCTTCATCTACTGGCTGTCGAAGTAG

Peptide Sequence

PEP ID

Zm00001d005751_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:186191042:186194061:1 gene:Zm00001d005751 transcript:Zm00001d005751_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Golgi SNAP receptor complex member 1

Sequence

MEASSWDAVRKQARRLEAQLDDQMIAYRKLVSMKSDGSEDNIESDIERSLKQLQQVNSQM
QTWVSSGGSEVLSHTLTRHMEILQDLTQEFYRLRSSLRAKQQHTSLLDLRDFDRAKFDVE
EPSDSADQVLLREQAAIGRSTGQMDNVISQAQATLGSLMTQRSTFGGITTKISNVSSQLP
TINHVLSSIRRKKSMDTIILSLVASVCTFLIFIYWLSK

Transcript Sequence

Transcript ID

Zm00001d005751_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:186191042:186194061:1 gene:Zm00001d005751 gene_biotype:protein_coding transcript_biotype:protein_coding description:Golgi SNAP receptor complex member 1

Sequence

ACCCGTTCCGCGCCCGTCCTCGACCCTCCCACCTATTCGCTCGCTCGCTCGCCGTCCGCG
CCCGCGCGGGCCGCGAGATCTAGGCCAGTCGCCGCGGCCGTGGCCGCGGGCTGACGGGAT
CTCTGTCCTCCCGACACGACGAACCTCTAGGAAGGCGCCTAAGACGAGGAGGAAGCGGGG
GCTATGGAGGCGTCTTCCTGGGACGCCGTTCGCAAGCAGGCAAGGAGGTTGGAAGCTCAG
TTAGATGACCAAATGATTGCATACCGTAAATTGGTTTCTATGAAATCAGACGGTTCAGAG
GACAACATTGAGTCTGATATAGAAAGATCACTGAAGCAGTTACAGCAAGTGAATTCGCAA
ATGCAAACTTGGGTATCATCAGGAGGTTCTGAAGTTCTTTCTCATACTCTGACTCGTCAT
ATGGAGATTTTGCAAGACCTTACTCAGGAATTCTATCGGCTTCGATCAAGTCTCAGGGCA
AAACAACAGCATACTTCTCTCCTTGACTTGAGAGATTTTGACAGAGCAAAGTTTGATGTT
GAGGAGCCGTCAGACTCAGCTGATCAAGTTCTTCTCAGGGAACAAGCTGCGATTGGCAGG
AGTACTGGACAGATGGATAACGTGATATCACAAGCTCAGGCAACACTTGGTTCTCTCATG
ACCCAACGGTCAACATTCGGTGGCATCACTACAAAGATAAGCAACGTCAGCAGCCAGCTT
CCAACAATTAACCACGTCCTCTCATCGATCAGAAGGAAGAAATCCATGGATACCATCATT
CTTTCGCTCGTTGCATCTGTCTGCACGTTTCTCATCTTCATCTACTGGCTGTCGAAGTAG
GTTTACCAGAGCAAAGATATTACAGTGTTGTAAGCTTGGGACCACACCACCAGTACCGGT
ACAGATAGTCTTCATTGGTGTTTGTACAATATTATTGGTTGATTGAATGCTGTTACGATT
CGGGCGTGCTGTAGCCACCGTGTCTCCAGCTGTGCAACTGCTGCCAATACTGTGAACTGA
ACTCTGTACCTCGTGTACTTCGGCATAACTAAGGGTGGAGCAACTGGCGTTGCTTTAGCT
GCCCCATGTTGGCATGTTGCTCAGATGTCGGCTTAAAGGTGGATCTTCACCTATGACTAT
AGTTGACAATATAGGCTCTATATTTTATACAATAAAATATAAGGATGAGGCTCTATTTGT
TTTTATTTTTGAACTAAAAATAATTTAGAACCCTATCAATTTGTAAAGAAACATTTGGAT
CACGATCTATTACCACCCCTACCTATGTCGTAAGCCTCTGTTATCAGACATTTTCGAGTC
A