Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005707_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:2:184018422:184027150:-1 gene:Zm00001d005707 gene_biotype:protein_coding transcript_biotype:protein_coding description:AUGMIN subunit 5
Sequence	ATGCCCGCGTCCTCCGTCTCGGGGGGTAGCGGCCCCGGAGGCGTCTCCCCGGATGCCATC ATCGAGTGGCTGCAGGACGAGATGGGGTACCCCTCGGCCCCTCCTGCACCGGATCAGCTC CGCAAGATCTGCCGGGGCAACATGATCCCCGTCTGGTCCTTCCTGCTCCGCCGCGTCCGC TCCGAGCGAACCGTCGCCACCGCGCGCCGCAATATCCTCGTCCACGGCGTCGCGGCCCGG CGGGCGCGGGAGGGCGGAGCGATGGGGGCGGGCGCGGGTGACGCTGCGGCCAGGGAGGCC GAGGCGAGGGAGCGGGACCTCGCCGCTGAGGAGGCCGAGCGGTTGCGTGGGATCGTGAGG AGGCAGCGCAAGGAGCTTCGCGCGCGCATCGCGGAGGTCGCCAGGGAGGAGGCGGAGCGC AAGCGCGTCCTCGGTGAGCGCTCCAATGCCAGGCACAAGCAAGTTATGCTCCAAGCATAT GAACAGCAATGCGATGAAGCGCACAAAATATTTGCTGAATACCAGCGCCGGCTACATCAG TTCGTTAACCAAGCAAGGGACGTGCGAAGATCAAGTATAGGCGTGGCTGGAGCTACAGGT GCTCTTGTGGATATGCAATTGCAGAGTGATAGAGATGATCTTTACCCATCGACTATCAAA AGCAATAGATTGCCAGAGGATCTTTTAGAAACTGCAGGTGAAAGGAGCATTCGGAAGGCA TGTGAAACTCTTGCTGCGGATATGATTGAAACAATTCGAAGTTCATTCCCGGCATTTGAA GGGTGTGGCATTAATTCAAGTTGCCAATTAGATGCAGAAAAGCTGGGTATTGACTTGGTT GGTGAAATACCAACATATGTTAAACTTGTTGCATTGGATTCCCTAAAGAATCCATTCATG CTTCTGCAGTCAATCATTACCTACACATCACGCATGAAAACACTTATACATAGAGAAACT GACAAGATTGACATACGCGCTGATGCAGAACTACTGAGGTATAAATATGAAAATGAGCAG GTTATTGATGCTGCTTCAACTGATGCAAGCTCACCCTTACCATATCAGGTGTATGGAAAT GGGAAGACTGGATCACAATTGTCAACTCGAGGAACATATGATCAGCTACTAGAAAGACAG AAAGAGCATGTACAACAGTTTTTGGCAACAGAAGATGCTTTGAACAAAGCTGCAGAAGCT AAAGCACTAAGTCAGAAGCTATTGCAACGCTTGTATGGCACTGCTGACATGGCAGGAAAT AAGAAGCTGCCCACTGGGAACACCACACAGAATGTGACCAACAGTAGGCATTTAGAGTTG GACGTTTGGGCCAAGGAAAGAGAAGTTGCAGGACTAAAGGCGAGCTTGAGTACACTTACA TCTGAGGTACAACGTTTGTATAAGTTATGCGCTGAGTGGAAGGAAGCAGAAGATTCACTG AAGAAGAAGTGGAAGAAAATCGAAGAATTTGACGCCCGTCGATCAGAGCTGGAGTTCATT TACAGTGCTCTTCAGCGGGCCAATATGGATTCATCAGCATTTTGGGAGCAACAGCCATTA TCAGCTAGAGGATATGCATCAACTACAATTATCCCTGCGTGCCATGCTGTGGTAGACATG TCTACGAACTCAAGGGACCTCATAGAGCGAGAGTTAGCTGCATTTAGCCAGAGCTTGGAT AATAGCTTGTGCAGGTTGCCAGCAACCCCTCAGGCCCTTTTGGAGGCTGTGGGTTCTAAC GGCGTGACAGGATCAGAAGCACTTGCAGCTGCTGAGAAACATGCAGCTTTGTTGACTGCA AGAGCTGGTGCCAGAGATCCATCTGCTGTGCCGTCTATATGCCGCATCTCTGCTGCTCTT CAGTATAACTTTGTTTCACCAGGTACAGAAGGCACAGATTCTGGCTTGGCTTCAGTATTA AATTCACTGGAGTTCTGCCTAAAACCATGTGGGTCTGAAGCTAGCATATTAGAGGATTTA TCAAAATCTATCAACTTGGTGCACACACGGAGAAATCTTGTTGAGAATGACCGTGTTTTG CTGAACCGTGCACATCGTGCTCAACAAGAATATGAAAGAGTGGCCAACTATTGTCTTAAA TTAGCTGGCGAACAAGAAAAGGTGGTGAGTGAAAGATGGCTTCCGGAACTGAGAAATGCA GTTCAAGAAGCTCGAAGGTGTTTTGATGACTGCCAGCGTGTTAGGGGTCTGGTTGATGAG TGGTACGAGCAGCCAGCCGCCACAATTGTGGATTGGGTAACGATAGATGGACAGAGCGTT GGTGCCTGGATCAACCTCGTGAAGCAACTCCACATGGAGATCTCCAGACGGACGTTGGCC ATGTCATCGGTAGGAGACGACTGA

Peptide Sequence

PEP ID	Zm00001d005707_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:2:184018422:184027150:-1 gene:Zm00001d005707 transcript:Zm00001d005707_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:AUGMIN subunit 5
Sequence	MPASSVSGGSGPGGVSPDAIIEWLQDEMGYPSAPPAPDQLRKICRGNMIPVWSFLLRRVR SERTVATARRNILVHGVAARRAREGGAMGAGAGDAAAREAEARERDLAAEEAERLRGIVR RQRKELRARIAEVAREEAERKRVLGERSNARHKQVMLQAYEQQCDEAHKIFAEYQRRLHQ FVNQARDVRRSSIGVAGATGALVDMQLQSDRDDLYPSTIKSNRLPEDLLETAGERSIRKA CETLAADMIETIRSSFPAFEGCGINSSCQLDAEKLGIDLVGEIPTYVKLVALDSLKNPFM LLQSIITYTSRMKTLIHRETDKIDIRADAELLRYKYENEQVIDAASTDASSPLPYQVYGN GKTGSQLSTRGTYDQLLERQKEHVQQFLATEDALNKAAEAKALSQKLLQRLYGTADMAGN KKLPTGNTTQNVTNSRHLELDVWAKEREVAGLKASLSTLTSEVQRLYKLCAEWKEAEDSL KKKWKKIEEFDARRSELEFIYSALQRANMDSSAFWEQQPLSARGYASTTIIPACHAVVDM STNSRDLIERELAAFSQSLDNSLCRLPATPQALLEAVGSNGVTGSEALAAAEKHAALLTA RAGARDPSAVPSICRISAALQYNFVSPGTEGTDSGLASVLNSLEFCLKPCGSEASILEDL SKSINLVHTRRNLVENDRVLLNRAHRAQQEYERVANYCLKLAGEQEKVVSERWLPELRNA VQEARRCFDDCQRVRGLVDEWYEQPAATIVDWVTIDGQSVGAWINLVKQLHMEISRRTLA MSSVGDD

Transcript Sequence

Transcript ID	Zm00001d005707_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:184018422:184027150:-1 gene:Zm00001d005707 gene_biotype:protein_coding transcript_biotype:protein_coding description:AUGMIN subunit 5
Sequence	AGTTTCAAAAAAACATTCGCACTCCCTCCCTCTACCGCCACTAGCCACCCTCCCCTACCC CAATCCCCTCTCCCCAGATCGAGCGCCGCGTGGCTAGGGTTTGCGCGACCGCCGGCAGCG ATGCCCGCGTCCTCCGTCTCGGGGGGTAGCGGCCCCGGAGGCGTCTCCCCGGATGCCATC ATCGAGTGGCTGCAGGACGAGATGGGGTACCCCTCGGCCCCTCCTGCACCGGATCAGCTC CGCAAGATCTGCCGGGGCAACATGATCCCCGTCTGGTCCTTCCTGCTCCGCCGCGTCCGC TCCGAGCGAACCGTCGCCACCGCGCGCCGCAATATCCTCGTCCACGGCGTCGCGGCCCGG CGGGCGCGGGAGGGCGGAGCGATGGGGGCGGGCGCGGGTGACGCTGCGGCCAGGGAGGCC GAGGCGAGGGAGCGGGACCTCGCCGCTGAGGAGGCCGAGCGGTTGCGTGGGATCGTGAGG AGGCAGCGCAAGGAGCTTCGCGCGCGCATCGCGGAGGTCGCCAGGGAGGAGGCGGAGCGC AAGCGCGTCCTCGGTGAGCGCTCCAATGCCAGGCACAAGCAAGTTATGCTCCAAGCATAT GAACAGCAATGCGATGAAGCGCACAAAATATTTGCTGAATACCAGCGCCGGCTACATCAG TTCGTTAACCAAGCAAGGGACGTGCGAAGATCAAGTATAGGCGTGGCTGGAGCTACAGGT GCTCTTGTGGATATGCAATTGCAGAGTGATAGAGATGATCTTTACCCATCGACTATCAAA AGCAATAGATTGCCAGAGGATCTTTTAGAAACTGCAGGTGAAAGGAGCATTCGGAAGGCA TGTGAAACTCTTGCTGCGGATATGATTGAAACAATTCGAAGTTCATTCCCGGCATTTGAA GGGTGTGGCATTAATTCAAGTTGCCAATTAGATGCAGAAAAGCTGGGTATTGACTTGGTT GGTGAAATACCAACATATGTTAAACTTGTTGCATTGGATTCCCTAAAGAATCCATTCATG CTTCTGCAGTCAATCATTACCTACACATCACGCATGAAAACACTTATACATAGAGAAACT GACAAGATTGACATACGCGCTGATGCAGAACTACTGAGGTATAAATATGAAAATGAGCAG GTTATTGATGCTGCTTCAACTGATGCAAGCTCACCCTTACCATATCAGGTGTATGGAAAT GGGAAGACTGGATCACAATTGTCAACTCGAGGAACATATGATCAGCTACTAGAAAGACAG AAAGAGCATGTACAACAGTTTTTGGCAACAGAAGATGCTTTGAACAAAGCTGCAGAAGCT AAAGCACTAAGTCAGAAGCTATTGCAACGCTTGTATGGCACTGCTGACATGGCAGGAAAT AAGAAGCTGCCCACTGGGAACACCACACAGAATGTGACCAACAGTAGGCATTTAGAGTTG GACGTTTGGGCCAAGGAAAGAGAAGTTGCAGGACTAAAGGCGAGCTTGAGTACACTTACA TCTGAGGTACAACGTTTGTATAAGTTATGCGCTGAGTGGAAGGAAGCAGAAGATTCACTG AAGAAGAAGTGGAAGAAAATCGAAGAATTTGACGCCCGTCGATCAGAGCTGGAGTTCATT TACAGTGCTCTTCAGCGGGCCAATATGGATTCATCAGCATTTTGGGAGCAACAGCCATTA TCAGCTAGAGGATATGCATCAACTACAATTATCCCTGCGTGCCATGCTGTGGTAGACATG TCTACGAACTCAAGGGACCTCATAGAGCGAGAGTTAGCTGCATTTAGCCAGAGCTTGGAT AATAGCTTGTGCAGGTTGCCAGCAACCCCTCAGGCCCTTTTGGAGGCTGTGGGTTCTAAC GGCGTGACAGGATCAGAAGCACTTGCAGCTGCTGAGAAACATGCAGCTTTGTTGACTGCA AGAGCTGGTGCCAGAGATCCATCTGCTGTGCCGTCTATATGCCGCATCTCTGCTGCTCTT CAGTATAACTTTGTTTCACCAGGTACAGAAGGCACAGATTCTGGCTTGGCTTCAGTATTA AATTCACTGGAGTTCTGCCTAAAACCATGTGGGTCTGAAGCTAGCATATTAGAGGATTTA TCAAAATCTATCAACTTGGTGCACACACGGAGAAATCTTGTTGAGAATGACCGTGTTTTG CTGAACCGTGCACATCGTGCTCAACAAGAATATGAAAGAGTGGCCAACTATTGTCTTAAA TTAGCTGGCGAACAAGAAAAGGTGGTGAGTGAAAGATGGCTTCCGGAACTGAGAAATGCA GTTCAAGAAGCTCGAAGGTGTTTTGATGACTGCCAGCGTGTTAGGGGTCTGGTTGATGAG TGGTACGAGCAGCCAGCCGCCACAATTGTGGATTGGGTAACGATAGATGGACAGAGCGTT GGTGCCTGGATCAACCTCGTGAAGCAACTCCACATGGAGATCTCCAGACGGACGTTGGCC ATGTCATCGGTAGGAGACGACTGAAGCAACCAGCCGTGACCTGCGGCTTTGGAAGTTCGG AGGCTCCTTTATGGGTTCGGTTTGGCGCCAAGATATCTTCTATCTACTCGATAGCCTTTT CCCATTGTAGTTTATACGTCTCTCTCTCTGGTTTGGTCTGTAATTAGTTCCTAACATGTT CCTTTTGTATGTTGTCAATTGTCATGTGCTGGTTGTCACTTGGCTC