Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005696_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:2:183690145:183698599:-1 gene:Zm00001d005696 gene_biotype:protein_coding transcript_biotype:protein_coding description:NPK1-related protein kinase 2
Sequence	ATGAAAGGCACACCCTATTGGATGGCACCTGAAGTCATTGTTGGGAGTGGGCATAGCTTT TCTGCAGATATATGGAGTGTAGGGTGCACAGTCATTGAAATGGCCACTGGCAAACCACCA TGGAGCCAGCAGTATCAAGAAGTTGCTCTTCTATTTCATGTTGGAACTACAAAATCGCAT CCACCTATACCTGAACATCTATCGCCAGAAGCCAAAGATTTTCTGCTAAAGTGCCTGCAG AAGGAACCAGAGCTGAGGTCTACTGCACCAGACTTATTAAAGCATCCTTTTGTCACTGGA GAATTGGATGACCTGCAGCCACTCAATCATGCTGCACGCAAGAACTCTTTTAATGAGATT CCTTCAGATGATATGCCAAATGGCTTGGGTTTGAATAAGTCTTCCAACTGGTCCACTATG AACTCCAGTAAATCATCCAAAATCAAGCCCTTATGGGAGGGTGGCTGTGATGATGATGAC ATGTGTGAGTTTGCTGACAAGGATGACTATGCAGGAGTTGGATCTAGCTATAATCCTATG TCAGAACCATTTGATAACTGGGAAAACAAGTTTGACATAAGCCCAGAGCAAAATTCTCAT CAACCAATGGAATTTGGTGAATTGGCCAAACATGTTGAAAGCAGCATAACTGGGAATGAT TTTACGTTCCCTGTTGGGGGAAGTTGTGAAGATGATGATGTACTTACAGAGTCAAAAATA AAGGCATTTCTTGAGGAGAAGGCTCTTGACCTGAAAAAGCTACAAACACCTTTGTATGAG GAGTTCTACAACACTGTGCATGGAGGGAGTTTTCAGGGAGCTGATCAAACTTCCAAGGGA AAACTCCCAATTAGTCCAAAATTTCCCCCTCGAGGAAAGTCGCCTCCATGCAAGACACGT GTAGGTGCATGTGATACTTCGAATGACACAGCTCCTGAAAGCTGCAGCAAGCAATTTCCA AGAAGCAGTGTGGTGGATAGCAGCCGAATTTTGAGAGAAATTGCTTCTCCTCAACTGAAT GAGTTTGCGGATAAAATCCATCTTGATGCCCAAGATAGCCCAAGCATCAGCTTCACCGAA AGGCAGAGGAAGTGGAAAGAAGAGTTGGACCAGGAACTTGAGAGGGAGAGAGTGCTGAGA TTAGCTGGCTGTGGTAAAGCACCATCCCCAAACAGAGGTTCCAACGTGAAAAAGGAGTAT CATGCTGACCATTGA

Peptide Sequence

PEP ID	Zm00001d005696_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:2:183690145:183698599:-1 gene:Zm00001d005696 transcript:Zm00001d005696_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:NPK1-related protein kinase 2
Sequence	MKGTPYWMAPEVIVGSGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVALLFHVGTTKSH PPIPEHLSPEAKDFLLKCLQKEPELRSTAPDLLKHPFVTGELDDLQPLNHAARKNSFNEI PSDDMPNGLGLNKSSNWSTMNSSKSSKIKPLWEGGCDDDDMCEFADKDDYAGVGSSYNPM SEPFDNWENKFDISPEQNSHQPMEFGELAKHVESSITGNDFTFPVGGSCEDDDVLTESKI KAFLEEKALDLKKLQTPLYEEFYNTVHGGSFQGADQTSKGKLPISPKFPPRGKSPPCKTR VGACDTSNDTAPESCSKQFPRSSVVDSSRILREIASPQLNEFADKIHLDAQDSPSISFTE RQRKWKEELDQELERERVLRLAGCGKAPSPNRGSNVKKEYHADH

Transcript Sequence

Transcript ID	Zm00001d005696_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:183690145:183698599:-1 gene:Zm00001d005696 gene_biotype:protein_coding transcript_biotype:protein_coding description:NPK1-related protein kinase 2
Sequence	ACCACTCCACTCTCGAATGCTCCCTCCTCGCTAACGGTCGCGAGGGGCATTCCCGTCCTT CTGCCGCCCCGCAAACCCCCGAAATTTCAAAACCCGACACTCGAAAGCGGGCGTCTCCAT TTCCCACTCGCCCCCTCCTCGATTCGATCCAGCTGGACGCCGCTCCCCGACGACGAGGAC GCCCGTGGAGCTCTAGAATCAAGCCATGCGACGGGACGACGCCGGCGGCGTAACCGGCTT CCACGACTTGTTTGACTCGGTGCGCCGCTCCATCTCCTTCCGGCCCGCCGCCGCAGCCCC GGAAGCCCCCGCGGGCCCATTCGTCGCGGGGGCTGGGGGGATCGGTGTGCGGATCAGCTC TTGCCTCCGGAAGTCGCGGGGGATGGGGCTGCTCGGTCTCATCACCAAAAACCCCTCGCC GCCGCGCCGCATGCTACCGCCGATGCCCGATGAGTCGGGCGGCGGCAGCGGAGGAGGTGG GGGCGACGACGCAGGCGGAGAGGAGAACCCGCCGATCCGGTGGCGGAAGGGGGAGCTCAT CGGGGCCGGTGCGTTCGGGCAAGTCTACCTCGGGATGAACCTGGACTCGGGCGAGCTCCT CGCTGTCAAACAGGTTTTGATCGGCAGGAGCAACGCGACACGGGAGAAGGCCCAAGCTCA TATTAAAGAGCTCGAAGAAGAAGTGAAACTGCTCAAGAACCTGTCTCACCCCAACATCGT TAGGTATCTTGGGACTGTTCGTGAGGAAGACACGCTAAACATTTTGCTGGAATTTGTTCC TGGAGGGTCTATTCAGTCACTTTTGGGGAAGCTCGGTTCATTCCCGGAGCCTGTCATTAA GAAATACACTAAGCAAATTTTGCAAGGATTGGAGTATCTGCATAGCAATGCAATAATACA TAGAGATATAAAGGGTGCAAACATTCTTGTTGATAATAAAGGGTGCATCAAACTTGCTGA TTTTGGGGCATCTAAGCAAGTTGCAAAGTTGGTAAGATCAAAATAATACGCTTAGTGTGC CCTTAAGGTCAAGTGTAACTGATGGAAGTTAGCAAACTTGGGCAATAAGATTGGGTTAGT CAGAAGAGAAACTTAGAGCATTCCGTCTCATCAATAATGAAAGAGCAAGTTCCATGCAGG CTAGATTCAGGGAGTCATCTATTCTTTTTTCCTTTGGCAAATTAGTTGCAACTGAATACG GTAGAGATAAAAACATGTGCTAGGTGGTGAAAGACGAAGCAAACATGAAAAATTCTAGAA TATTGTAGGACTAAAATCTAATCTGTAGGCCTGTACTGAAGCTTACAAAACAAAGTGCGG GTGCTCATAACTTCTATTCTTGTAGTGACAACGCTAAGACACAACAACAATAACAACAAA GCTTTATAATCTTATGTAAGTTGAAGTAGACTAGAGTTGAAACTCAATGAAAACCATGGC ACATGGATATATGTTTTTCATGCACTTCTATTAAAGGCTAAATCTTTGGTTATATCGCAT CTTTTTAAATCTCATGTTACTACCTCTTTTCATGTTAATTTTAGCCTTCCAATGTATCTC TTTCCATTGTTATCGCATCTTAGGATCTCACCGGTGCCACTAGAGGTATCCGTTGGACAC ATTCAAACCATCTCAATCGGTGTTAGATAAGCTTTTCTTCAATTGGTGCTACCCCTAGTC TATCACGTTTATCATCATTCTGGGGTCACAAATATAACACAAGATACATATTTTTGCAAC ACTTATTTGCTGAGCATGGCGTCTTTTTGTAGGCCAACATTTTACATCATACAACACAAA CAAGTGTAATCAACGTCGTATAAAACTTGCCTTTTAACTTTTGTGGTACCTTCTTTTCAC ATAGAACGATAGATGCTTGACGTCACTTCATCCACACTATTTTGATTCTATGGCTAACAT CTTCAACAATATCTTCATCTCTTTGTAGTGTTGATCCTAAATACCGAAAGATATCTTTTC CAGGAACTACTTGACCTTTTAAACTAACATCTCCTTCCTCATTTGTAGTGGTACCAAAAT CACATCTTATATATTCGTACCTTTGGACCCTAGAGCCCCCAGTTCCAGTTTCCTATTTCT CTTGCTCGACTTTCATCAATTAGCACTACATTGTTTGCAAAAAAACATAGATAAATGGAT ATTCATGACTCTTGTGACCTCATCCATCACTAAGATAAAAAACTAAGGGCTCAAAGCTGA TCCTTGATGTAATCATGAAATCATCTGTCTTCATCACTTGTTCGAACACTAATCATAATA TTGCTGTACACATCCTTAATGAGTCGAACGTACTTCGTTGAAATTTTGTTTGTCCAAAGC CTACCACATAACATTCCTTGGTTTTTTGTCATAAGTCTTTTCCAAGTTAGTAAAAACCAT ATGTAGGTCTTTCTTCTGCTCCCTATACTATACCATCACTTGTCTTATTAAGAAAATGGC TTCAATGATTGATCTTCTGGGCATGAAACCAAACTGGTTCATAGAACTCCTCCTTATGTC TCTTAGACAATACTCGATAACTCTCTCTCATAGCTTCATACTTATCAACTTAATTCCTTG ATAATTAGTACAACTTTGAATATCTCCTTTATTTTTGTAGATCGGTACCAATATACTTCT CCACTCGTTAGGCATCTTGTTTGATCGAAAGATATGGTTGAATAAATTTGTTAGCCATAT TATAACTATGTCCCTGAGGCATCTCCATGTCAAAAAAAAAAACTTGACCTGCGGGGGGTA AGACAGCCCCCGGGTATTGTATTAAGAAGAAGACCTTCTCACACAGGTCAAGAAAACCCC CGAACCCCTGCCCCACCCATACACAGCGGCATCGAAGCCCATGTGGGAACGACCACGACC GGGGCTGAGCCTTAGACCTGTGCTTTGGCGTGGGACAGACGAGGGGATTTTTTAACCACA GCCTGAAATTCGCTCCCACGGGGAGTCGAACCCAGGACCTGAGGAGTGCTACTCAGACCA CCTAACCAACTCAGCTAGAGGCCCTTTCGCGAGGCATCTCCATGTCTCAATTGGGATACC ATCAGAGCCCATTTTCTTACCCTCTTTCATTCTTTTTAATGCCTCTTTAACCTTATATTC TTGGATTCTACGTACAAAGTACTTATTGGTGTCATCAAAAGAGTCATTGATTTGAAAGGG TGTGTTCATGTTCTCTCCATCGAATAATTTTCAAAATACTCTCGCTATTTATGTCTAATC TCATCCTCCTTCACCAAAAGATGTTCTGTTTCATCCTTAATGCACTTAACTTGGTTGAAG TCCCTTATCTTTCTCTCACGGAGCCTAGCCATCATATATACGTCTTCTCATTCCTTCGTA CTCAAATGTTGGTAAAGATCCTCATACGCCTATCCTTTGCCACAATTATAGTTCACTTTG TGGTTTTCTTTGCTACCTTGTACTTCTCTATGTTGTCCATACTCCTGTCGTGTTTCAAAC GTCTATATCATTCTTTCTTCTCCCTAATAGCCTACAACAGTGGTTGCTTTTCAGCCCTTT GGCTTTTGCCTTTTGCGAAAGCAAAATTAGGTTAAAAAGCCTAACCAAAGAGGACCTTAG TCTTTGGAACTTATAAGAATATTTACACATCTTGTAGTAGTTGTCTCAACCAACTCACTT AACTTATCTACATCTCAACTACCTAAATGGAACCTAGCTGAAGCTCACCTAGGATTCATC TGTAGTCTGCCCAGACTTGGTTGGGACAAAAGTGCTTCTTGTTATTATCAGTGGCAATGT TAAACTACTAGAAATAGGCAGTCTGGTATGTCGCCGATGTGGTCTATTTTTATAATAGAA ACATTGCAATTGATACCCAATTACCCCCATCTGATCATCATATTTCTACTTTTCTGGCCA CAATTATGCAATCTGGTGTGGTAGTATGTCAGAGCAATTAGCATTTGCCAATACTCATCC TCACTTCTTGTATTATTTGTGTATTAACATAATTTCCGTCTGCATTTTTTATTTGGAGAT ATGGTGCCACTATGTTTTTTCTTTCTCCAAGATATTCCTAATTTTCTATGTCAATGCACT TACAACAATATGCCTTGCTTTGTTAGGCTACTGTGACAGCAGCCAAAACAATGAAAGGCA CACCCTATTGGATGGCACCTGAAGTCATTGTTGGGAGTGGGCATAGCTTTTCTGCAGATA TATGGAGTGTAGGGTGCACAGTCATTGAAATGGCCACTGGCAAACCACCATGGAGCCAGC AGTATCAAGAAGTTGCTCTTCTATTTCATGTTGGAACTACAAAATCGCATCCACCTATAC CTGAACATCTATCGCCAGAAGCCAAAGATTTTCTGCTAAAGTGCCTGCAGAAGGAACCAG AGCTGAGGTCTACTGCACCAGACTTATTAAAGCATCCTTTTGTCACTGGAGAATTGGATG ACCTGCAGCCACTCAATCATGCTGCACGCAAGAACTCTTTTAATGAGATTCCTTCAGATG ATATGCCAAATGGCTTGGGTTTGAATAAGTCTTCCAACTGGTCCACTATGAACTCCAGTA AATCATCCAAAATCAAGCCCTTATGGGAGGGTGGCTGTGATGATGATGACATGTGTGAGT TTGCTGACAAGGATGACTATGCAGGAGTTGGATCTAGCTATAATCCTATGTCAGAACCAT TTGATAACTGGGAAAACAAGTTTGACATAAGCCCAGAGCAAAATTCTCATCAACCAATGG AATTTGGTGAATTGGCCAAACATGTTGAAAGCAGCATAACTGGGAATGATTTTACGTTCC CTGTTGGGGGAAGTTGTGAAGATGATGATGTACTTACAGAGTCAAAAATAAAGGCATTTC TTGAGGAGAAGGCTCTTGACCTGAAAAAGCTACAAACACCTTTGTATGAGGAGTTCTACA ACACTGTGCATGGAGGGAGTTTTCAGGGAGCTGATCAAACTTCCAAGGGAAAACTCCCAA TTAGTCCAAAATTTCCCCCTCGAGGAAAGTCGCCTCCATGCAAGACACGTGTAGGTGCAT GTGATACTTCGAATGACACAGCTCCTGAAAGCTGCAGCAAGCAATTTCCAAGAAGCAGTG TGGTGGATAGCAGCCGAATTTTGAGAGAAATTGCTTCTCCTCAACTGAATGAGTTTGCGG ATAAAATCCATCTTGATGCCCAAGATAGCCCAAGCATCAGCTTCACCGAAAGGCAGAGGA AGTGGAAAGAAGAGTTGGACCAGGAACTTGAGAGGGAGAGAGTGCTGAGATTAGCTGGCT GTGGTAAAGCACCATCCCCAAACAGAGGTTCCAACGTGAAAAAGGAGTATCATGCTGACC ATTGAACAAACAGCAGCGTTCATCGTCTCTTTATTTCATCCCACAGAACACAACTGGATA GTAACTACACAATGCCACAGACTGGCAGCAACATGAGTACAGCCTGCAGCGCCTCACCAT TCGCGGTATTGGCCAAGCTATGACTGCAGATCCATCTCGTACAAGTGGCAGATTTACGTT GAAGTGGACTGGTACATAGGGGCACTCGTCGCGAATATCAGGATCATTGTCGCTGCTACC CCGGAGGACGGCGTGCTGACAGTTTCCTGATTTTAAGGCCGCGTTTGTCATTCTTTTTGA TGCAGTGCTATACATGCGACTTCGGTTATATTTGGTTTCTATTGAGAAAAAAATAGTGTT GTAAAAATTTTGTGTTTGTAAGCGAGCTTGGCGTGGGGTTTGGTTTTGTATGGAGCTTGT TTGTGAAAGCGTGTAATAAGATAGCTA