Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005687_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:2:183363896:183370827:-1 gene:Zm00001d005687 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate synthase5 description: trehalose-6-phosphate synthase5
Sequence	ATGGTTCTGAAGTCGCACACAAATCTGCTAGATATGTGTTGTGAAGATGTGTTTGACTTC CAACAACCTTTAAGATCTCCTCGTCATGTGGTGAACTCTCCTGGCATCATATCTGACCCT GATTGGGAAAGTAGTAATGATGGCAACTCAGTTGGTTCTATGCCTTTTTGTTTTAAGAGA AAGATTATTGTTGCAAATTTCCTTCCTGTGATCTGTGCAAAAAATGAAGCTACCGGAGAA TGGTCCTTTGCCATGGATGATAATCAACTGCTTGTTCAACTCAAAGATGGTTTTCCAATT GGTAATGAAGTTATTTATGTGGGTAGTTTGAATGTTCAAGTTGATCCTATTGAGCAAGAT CGAGTTTCTCAGAAGCTCTTCAAGGAACACAGATGCGTACCTACCTTTCTCCCAGCTGAA CTCCAGCATCAATTCTATCACATATTCTGCAAACAGCACTTATGGCCACTTTTCCATTAT ATGCTTCCTGTTTGTCATGACAAAGATGAGCTCTTTGACCGTTCCCTTTTTCAAGCCTAC GTGCGGGCCAACAAAATTTTTGCTGACAAAATTGTGGAGGCAGTCAATTCGGATGATGAT TGTGTGTGGGTTCATGATTATCACCTCATGCTTATCCCAACCCTTTTAAGAAAGAAACTG CACCGGATCAAAGTTGGTTTCTTCCTCCACAGCCCATTTCCCTCGTCTGAGATCTATAGG ACACTGCCAGTGCGGGATGAAATTCTAAAATCACTTCTTAATGCTGACCTCATTGGCTTT CAAACTTTTGACTATGCCCGCCACTTCCTTTCATGTTGCAGCAGGCTTTTAGGCCTTAAT TATGAGTCCAAACGTGGCCACATAGGTATAGAGTACTTCGGCCGAACAGTGAGCCTCAAG ATTCTTGCTGCAGGTGTACATGTTGGCCGGCTTGAGGCTACATTGAGGTTGCCTGCTACA ATTAAAAAGGTTCAAGAAATTGAGAGTAGATATAGTGGCAAGTTGGTAATATTAGGTGTA GATGACATGGACATCTTTAAAGGTATCAGTCTAAAACTGCTTGGCTTGGAGCTTCTTCTG GAAAGAACACCTAAGCTTCGAGGCAAGGTTGTCCTTGTACAGATTGTTAATCCTGCAAGA AGCATCGGAAAAGACATTGAGGAAGCGAAATATGAAGCTGAATCTGTAGCTCAAAGGATA AATGATAAATATGGTTCTGCTAATTACAAGCCTGTTGTCCTCATTGACTACTCAATACCT TTCTATGAAAAGATCGCATTTTATGCTGCATCTGACTGCTGTATTGTAAATGCTGTGAGG GATGGCATGAATTTGATACCGTATGAGTACACCGTATGCAGGCAGGGAAATGAGGAGCTT GATAAGCTCAGAGGTCTTAATAAGAGCTCATCTCACACAAGCACACTTATTGTGTCTGAA TTTGTGGGTTGCTCTCCATCACTTAGTGGAGCATTCAGGGTAAATCCTTGGAGTATGGAA GATGTGGCTGATGCATTATACAGTGTAACAGACCTGACACGATATGAGAAGAATCTGCGC CATGAAAAGCACTATCGCTATGTCAGGTCTCATGATGTTGCTTACTGGGCACGCAGCTTT GACCAGGATCTGGATAAAGCATGCATAGAGCAATACAGCCAAAGATGTTGGACAACTGGG TTTGGTTTAAATTTTAGAGTTATTGCCCTTTCACCTGGGTTTAGAAGACTGTCTCTAGAA CACCTAGCCTCGTCTTATAAGAAGGCTAACAGGAGGATGATATTCCTGGACTACGATGGG ACCCTTGTGCCGCAGACATCACACGACAAATCTCCAAGCGCTGAACTTATCTCTACCCTT AACAGCTTGTGCAGTGATATGAAGAACACAGTATTTATAGTCAGCGGACGAGGAAGAGAT TCCCTAAGCGAGTGGTTTGCTTCATGCGAGAACCTCGGTATCGCTGCCGAACATGGTTAC TTTATCAGATGGAACAAAGCAGCTGAATGGGAGACAAGCTTCTCAGGTATTTATTCTGAA TGGAAGCTCATCGCGGACCCTATCATGCATGTATACATGGAAACAACTGATGGGTCCTTC ATAGAGCCAAAAGAGAGCGCTTTGGTATGGCACTATCAGAACACGGATCATGACTTTGGC TCGTGCCAGGCAAAGGAGCTAGTGAGCCATCTTGAGCGAGTCCTATCGAACGAACCTGTT GTCGTGAGGCGTGGCCATCAGATCGTAGAAGTTAAACCTCAGGGAGTTAGCAAGGGGATT TCCGTGGACAAGATCATCCGGACCTTGGTCAGCAAAGGGGAAGTACCAGACCTTTTGATG TGCATCGGAAACGATCGGTCGGACGAGGACATGTTCGAGAGCATCAACAGAGCCACCTCC CTTTCCGAGCTTCCTGCCGCTCCAGAAGTATTCGCCTGTTCCGTTGGCCCCAAGGCCAGC AAGGCAAACTACTACGTCGATGGCTGCGACGAAGTAATCAGACTGCTGAAGGGTGTCACA GCCGTTTCGCTCCAAAAGGATACTGCCGGCCATAGCCATGCGGCATTCGAGGATACGCTT GAGGTTGTCAGCTGA

Peptide Sequence

PEP ID	Zm00001d005687_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:2:183363896:183370827:-1 gene:Zm00001d005687 transcript:Zm00001d005687_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate synthase5 description: trehalose-6-phosphate synthase5
Sequence	MVLKSHTNLLDMCCEDVFDFQQPLRSPRHVVNSPGIISDPDWESSNDGNSVGSMPFCFKR KIIVANFLPVICAKNEATGEWSFAMDDNQLLVQLKDGFPIGNEVIYVGSLNVQVDPIEQD RVSQKLFKEHRCVPTFLPAELQHQFYHIFCKQHLWPLFHYMLPVCHDKDELFDRSLFQAY VRANKIFADKIVEAVNSDDDCVWVHDYHLMLIPTLLRKKLHRIKVGFFLHSPFPSSEIYR TLPVRDEILKSLLNADLIGFQTFDYARHFLSCCSRLLGLNYESKRGHIGIEYFGRTVSLK ILAAGVHVGRLEATLRLPATIKKVQEIESRYSGKLVILGVDDMDIFKGISLKLLGLELLL ERTPKLRGKVVLVQIVNPARSIGKDIEEAKYEAESVAQRINDKYGSANYKPVVLIDYSIP FYEKIAFYAASDCCIVNAVRDGMNLIPYEYTVCRQGNEELDKLRGLNKSSSHTSTLIVSE FVGCSPSLSGAFRVNPWSMEDVADALYSVTDLTRYEKNLRHEKHYRYVRSHDVAYWARSF DQDLDKACIEQYSQRCWTTGFGLNFRVIALSPGFRRLSLEHLASSYKKANRRMIFLDYDG TLVPQTSHDKSPSAELISTLNSLCSDMKNTVFIVSGRGRDSLSEWFASCENLGIAAEHGY FIRWNKAAEWETSFSGIYSEWKLIADPIMHVYMETTDGSFIEPKESALVWHYQNTDHDFG SCQAKELVSHLERVLSNEPVVVRRGHQIVEVKPQGVSKGISVDKIIRTLVSKGEVPDLLM CIGNDRSDEDMFESINRATSLSELPAAPEVFACSVGPKASKANYYVDGCDEVIRLLKGVT AVSLQKDTAGHSHAAFEDTLEVVS

Transcript Sequence

Transcript ID	Zm00001d005687_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:183363896:183370827:-1 gene:Zm00001d005687 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate synthase5 description: trehalose-6-phosphate synthase5
Sequence	ACGACGATCTTATCCACAGGCCGCAGTGGCGCTCGCCTAGATCGGCACGACCAGCAGGCA GCAGGAGCGGCGGAATCATCCGAGAGGGCCCGTTGCGATCTACAAAAAGGGAATTTCCCC CGATCCGCAAACCTCCACGACATATACTCCGTTTGCCTGTGTTGGGTAGAGTCGTATAGC GTGGAGAAGAGGCTTGGTGCCAAGAAACTGGCATTTCGATTTGGGGAGTGGCTAAATTCG TCGCTGTGGAATCATGGTTCTGAAGTCGCACACAAATCTGCTAGATATGTGTTGTGAAGA TGTGTTTGACTTCCAACAACCTTTAAGATCTCCTCGTCATGTGGTGAACTCTCCTGGCAT CATATCTGACCCTGATTGGGAAAGTAGTAATGATGGCAACTCAGTTGGTTCTATGCCTTT TTGTTTTAAGAGAAAGATTATTGTTGCAAATTTCCTTCCTGTGATCTGTGCAAAAAATGA AGCTACCGGAGAATGGTCCTTTGCCATGGATGATAATCAACTGCTTGTTCAACTCAAAGA TGGTTTTCCAATTGGTAATGAAGTTATTTATGTGGGTAGTTTGAATGTTCAAGTTGATCC TATTGAGCAAGATCGAGTTTCTCAGAAGCTCTTCAAGGAACACAGATGCGTACCTACCTT TCTCCCAGCTGAACTCCAGCATCAATTCTATCACATATTCTGCAAACAGCACTTATGGCC ACTTTTCCATTATATGCTTCCTGTTTGTCATGACAAAGATGAGCTCTTTGACCGTTCCCT TTTTCAAGCCTACGTGCGGGCCAACAAAATTTTTGCTGACAAAATTGTGGAGGCAGTCAA TTCGGATGATGATTGTGTGTGGGTTCATGATTATCACCTCATGCTTATCCCAACCCTTTT AAGAAAGAAACTGCACCGGATCAAAGTTGGTTTCTTCCTCCACAGCCCATTTCCCTCGTC TGAGATCTATAGGACACTGCCAGTGCGGGATGAAATTCTAAAATCACTTCTTAATGCTGA CCTCATTGGCTTTCAAACTTTTGACTATGCCCGCCACTTCCTTTCATGTTGCAGCAGGCT TTTAGGCCTTAATTATGAGTCCAAACGTGGCCACATAGGTATAGAGTACTTCGGCCGAAC AGTGAGCCTCAAGATTCTTGCTGCAGGTGTACATGTTGGCCGGCTTGAGGCTACATTGAG GTTGCCTGCTACAATTAAAAAGGTTCAAGAAATTGAGAGTAGATATAGTGGCAAGTTGGT AATATTAGGTGTAGATGACATGGACATCTTTAAAGGTATCAGTCTAAAACTGCTTGGCTT GGAGCTTCTTCTGGAAAGAACACCTAAGCTTCGAGGCAAGGTTGTCCTTGTACAGATTGT TAATCCTGCAAGAAGCATCGGAAAAGACATTGAGGAAGCGAAATATGAAGCTGAATCTGT AGCTCAAAGGATAAATGATAAATATGGTTCTGCTAATTACAAGCCTGTTGTCCTCATTGA CTACTCAATACCTTTCTATGAAAAGATCGCATTTTATGCTGCATCTGACTGCTGTATTGT AAATGCTGTGAGGGATGGCATGAATTTGATACCGTATGAGTACACCGTATGCAGGCAGGG AAATGAGGAGCTTGATAAGCTCAGAGGTCTTAATAAGAGCTCATCTCACACAAGCACACT TATTGTGTCTGAATTTGTGGGTTGCTCTCCATCACTTAGTGGAGCATTCAGGGTAAATCC TTGGAGTATGGAAGATGTGGCTGATGCATTATACAGTGTAACAGACCTGACACGATATGA GAAGAATCTGCGCCATGAAAAGCACTATCGCTATGTCAGGTCTCATGATGTTGCTTACTG GGCACGCAGCTTTGACCAGGATCTGGATAAAGCATGCATAGAGCAATACAGCCAAAGATG TTGGACAACTGGGTTTGGTTTAAATTTTAGAGTTATTGCCCTTTCACCTGGGTTTAGAAG ACTGTCTCTAGAACACCTAGCCTCGTCTTATAAGAAGGCTAACAGGAGGATGATATTCCT GGACTACGATGGGACCCTTGTGCCGCAGACATCACACGACAAATCTCCAAGCGCTGAACT TATCTCTACCCTTAACAGCTTGTGCAGTGATATGAAGAACACAGTATTTATAGTCAGCGG ACGAGGAAGAGATTCCCTAAGCGAGTGGTTTGCTTCATGCGAGAACCTCGGTATCGCTGC CGAACATGGTTACTTTATCAGATGGAACAAAGCAGCTGAATGGGAGACAAGCTTCTCAGG TATTTATTCTGAATGGAAGCTCATCGCGGACCCTATCATGCATGTATACATGGAAACAAC TGATGGGTCCTTCATAGAGCCAAAAGAGAGCGCTTTGGTATGGCACTATCAGAACACGGA TCATGACTTTGGCTCGTGCCAGGCAAAGGAGCTAGTGAGCCATCTTGAGCGAGTCCTATC GAACGAACCTGTTGTCGTGAGGCGTGGCCATCAGATCGTAGAAGTTAAACCTCAGGGAGT TAGCAAGGGGATTTCCGTGGACAAGATCATCCGGACCTTGGTCAGCAAAGGGGAAGTACC AGACCTTTTGATGTGCATCGGAAACGATCGGTCGGACGAGGACATGTTCGAGAGCATCAA CAGAGCCACCTCCCTTTCCGAGCTTCCTGCCGCTCCAGAAGTATTCGCCTGTTCCGTTGG CCCCAAGGCCAGCAAGGCAAACTACTACGTCGATGGCTGCGACGAAGTAATCAGACTGCT GAAGGGTGTCACAGCCGTTTCGCTCCAAAAGGATACTGCCGGCCATAGCCATGCGGCATT CGAGGATACGCTTGAGGTTGTCAGCTGATCCACACAAGTAGTCAGTCAGCTCAAACTAGC TACGTCCAGTGTGTTCAGCGTGCCAATCTCAAATCTCCACTGCATGCAAGCCACTCATCA CTCCAAACCATATGTGCCAAGTGGAACTCTAAATTGGACGGAGACAAGTATCGCCATTGC TGACACAGAGACAGAACAGCGGTCACAAACTGCAAGTTCGAGCGAATGGCGTCGCGGTTG ATGATTCACTGACGACAACGGAAATCACAAACCGCAAGTTTTCAATTCGTAGGCTAAGAC AACTAGTGGGACGCCATACATTTTGTAGGCGGCTGATCTGGTGGTGAAAGGGTGGATGTC CCTGCTAGAGCCCCAGCTTACGGCATCTGGGAGAGCCTTGGAAGTTGGACCCCGACGCTT GTGCTGCACTGAGGACTGTTACACTATTTTCTTTGTACAGAACAAACAGGTGTGGTTAGG CGATTAGCGCTGTGACGATTGATTGTAATTCACCCACGTACCATTGAGGAAATTAATGGC TGCGATGGTGAAGCGCCGTGCGCATGGCACATTGT