Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005671_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:182856428:182859197:1 gene:Zm00001d005671 gene_biotype:protein_coding transcript_biotype:protein_coding description:ASC1-like protein 1

Sequence

ATGGCGGCGCTCCTGGAGCTGTTCCTGGGCTCCTCTCCCACGCCGGTGGACTGGGAGGCA
GAGGTCTACCCGGCGTACGGGGACTTCGCCGTACTCCCCTTACTCGTCGCCTTCTTCCCC
GCCGTCCGGTTCCTCCTCGACCGACTCGTCTTCGAGGTTTTAGCACGAAAATTTATATTT
GGAAAGGGACATGATAAGCTTTCTGAAACAGATGACAGTAGAAAGAAAATCAATAAATTT
AAGGAATCAGCATGGAAGTTTGTTTTTTTTCTTTCTGGCGAACTGCTTTCACTATCTGTA
ACATACAATGAGCCATGGTTTAAGAACACAAGATACTTTTGGATAGGCCCTGGTGACCAG
ATCTGGCCTGATCAAAAGATAAAACTGAAGCTCAAAGCTGTCTACATGTATGCTGCTGGA
TTTTACACATATTCAATTTTCGCTCTCCTGTTCTGGGAAACAAGACGTTCGGACTTTGGA
GTATCAATGTCCCACCATATAGCAACTGTTGTTCTGATTATTCTTTCCTACATTTTCCGA
TTCGCTCGTGTTGGCACTGTTGTTTTAGCCCTTCATGATGCAAGTGATATATTCCTAGAG
ATTGGGAAGATGGCCAAGTACAGTAGCTGCGAGTGGCTAGCAGTTATGGCATTTCTTCTT
TTTGTGGCATCGTGGATACTTCTTCGGCTCGTTATGTTCCCTTTCTGGATCCTAAGAAGC
ACAAGCTATGAAGTGCTGCTGACCTTGGATAGGGAGAAGCATCGATTTTATGGCCCCATA
TACTACTATGTTTTCAACTGTCTTCTGTTCTCACTCCTAGTTCTTCACATATATTGGTGG
GTACTGATATGGCGGATGCTAGTTAAACAGATTCAATCGAAAGGGCGTGTTGGTGATGAT
GTTCGATCCGATTCTGAAGGCGAAGATGAGCATGAAGATTAA

Peptide Sequence

PEP ID

Zm00001d005671_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:182856428:182859197:1 gene:Zm00001d005671 transcript:Zm00001d005671_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:ASC1-like protein 1

Sequence

MAALLELFLGSSPTPVDWEAEVYPAYGDFAVLPLLVAFFPAVRFLLDRLVFEVLARKFIF
GKGHDKLSETDDSRKKINKFKESAWKFVFFLSGELLSLSVTYNEPWFKNTRYFWIGPGDQ
IWPDQKIKLKLKAVYMYAAGFYTYSIFALLFWETRRSDFGVSMSHHIATVVLIILSYIFR
FARVGTVVLALHDASDIFLEIGKMAKYSSCEWLAVMAFLLFVASWILLRLVMFPFWILRS
TSYEVLLTLDREKHRFYGPIYYYVFNCLLFSLLVLHIYWWVLIWRMLVKQIQSKGRVGDD
VRSDSEGEDEHED

Transcript Sequence

Transcript ID

Zm00001d005671_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:182856428:182859197:1 gene:Zm00001d005671 gene_biotype:protein_coding transcript_biotype:protein_coding description:ASC1-like protein 1

Sequence

TCCTCCGATTTTATGCGTTATTTTGTTTGCCAACCCACAGAAAAAGGCGGCAGTTCATCC
GCTGCTGTTCCTAGTTCTCTCCACCCAGAAGTCGACCTCGTTGTTTCCTCCCTCCTGTCC
CAAATCTCACCTCCTTCCAGTTCCAGCTACCGCTGCTCGCGTTGACTCGCCTCTTCCTCC
ATTCAGTGACTCCTTGGATCGGCTCAGGGACACGCACCAGCGTATTGTGTCGGCGCCGAA
TCTTGCGCGCATTTCGCGCTATTGTTGCCCCGGAGGAGTGGTTTGGATCCAAGAAAGTGA
TCGGCCTTCTTGGTTGGATCTCCTCCCGCAATGGCGGCGCTCCTGGAGCTGTTCCTGGGC
TCCTCTCCCACGCCGGTGGACTGGGAGGCAGAGGTCTACCCGGCGTACGGGGACTTCGCC
GTACTCCCCTTACTCGTCGCCTTCTTCCCCGCCGTCCGGTTCCTCCTCGACCGACTCGTC
TTCGAGGTTTTAGCACGAAAATTTATATTTGGAAAGGGACATGATAAGCTTTCTGAAACA
GATGACAGTAGAAAGAAAATCAATAAATTTAAGGAATCAGCATGGAAGTTTGTTTTTTTT
CTTTCTGGCGAACTGCTTTCACTATCTGTAACATACAATGAGCCATGGTTTAAGAACACA
AGATACTTTTGGATAGGCCCTGGTGACCAGATCTGGCCTGATCAAAAGATAAAACTGAAG
CTCAAAGCTGTCTACATGTATGCTGCTGGATTTTACACATATTCAATTTTCGCTCTCCTG
TTCTGGGAAACAAGACGTTCGGACTTTGGAGTATCAATGTCCCACCATATAGCAACTGTT
GTTCTGATTATTCTTTCCTACATTTTCCGATTCGCTCGTGTTGGCACTGTTGTTTTAGCC
CTTCATGATGCAAGTGATATATTCCTAGAGATTGGGAAGATGGCCAAGTACAGTAGCTGC
GAGTGGCTAGCAGTTATGGCATTTCTTCTTTTTGTGGCATCGTGGATACTTCTTCGGCTC
GTTATGTTCCCTTTCTGGATCCTAAGAAGCACAAGCTATGAAGTGCTGCTGACCTTGGAT
AGGGAGAAGCATCGATTTTATGGCCCCATATACTACTATGTTTTCAACTGTCTTCTGTTC
TCACTCCTAGTTCTTCACATATATTGGTGGGTACTGATATGGCGGATGCTAGTTAAACAG
ATTCAATCGAAAGGGCGTGTTGGTGATGATGTTCGATCCGATTCTGAAGGCGAAGATGAG
CATGAAGATTAACTTTTTAGGTTGAATGATTAACTGAAGAACTACATTGTGTGATACCTG
CAGCAAGGCACACCTTCTGAACCTTTTTTTTTTCTTTTACAGAAGATATCCAGATATTGT
AATTCATTAGGTCATATCATTCGTTCAGCATAGAAGATGACAACCATCATTTGGGAGTTG
TCAATGAAGCCGCCTATCGGATGCTTTTTATCAAAACAGAAGTGCATTGTATTTATTTCA
CTAAACCATCATTTATAAGAGATACAGAATGATCCCTTGTTCATCCATTCTTGTAGCTAG
ACAGTTGATTTGCTTTCAAATCATGTAATTTGCTACAGAAGCTTAGTTGATTTCTTGGTG
TATCATTCATTGTGATGGAAATGGAAATCTTGGGAAGAAGTTCCCAACAAGAATGTAACA
TTTGTACTTTTATTTCT