Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005650_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:2:181987748:181992283:1 gene:Zm00001d005650 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene119 description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH5
Sequence	ATGGCGTTGATGGCGCCTTCACCATCGTCGGCGGCAGGGCCGACGACGAGGCCGCCCCCG CTGTCATTTCGCCTTCGGCTCAGAACGGATGCCCGGATAAGGTGGAGGCCGCCGCCACAG TTTCGCCTCTGCCTGAGAACGGCGCCCCGCGGGTCGGATAAGGTGGAAGAGGTGGCTGAT CCTGCCGCCGTTTCACCTGTGGCTCAGAGTTGCGGCCTGCCTCACCAAGAGGATGATAAG GTGGACGATCTCTCAGCTGTTTTGCCTGCAGCGCGCAGCAGCGCCCTCCCACATGCCCTG CCTCAGTCAGGGCCGGAGAGGGCTAGGCAGGATGGAGACGGTGGGGAGAACGGAGAGGTG CAATTGGTGGGCGGTGCAGTCAAGCTGTCATCGGATGGTCAGCAAGGGGACAGGGTGGTG CAGGTGGCAGGGCCAACGTTAGAAGTACTGGGGAGCTGTACCACTGTTGGTGCTAGTTCT ATGCAGAACGGTGGCGAGGGGGATGGCTTGTTGGTGGCAGCAGAGAAGGGCTGTGGTGGC AGCAGCGATATGGGGCAGGAGGTTGCTGCTAATGATTTCACAGAGATTGAAAACAAAACA GGCACTGGTGAGTTACAGGGAAAGGAAAATGGAATTGCAGGAAGCAGAACAAAACGGTGG TCGTCGGAATCGTCTCTGAATCCGCTGCCTAAGAGGAGGGCAGTCTCAGCCGTACGCAAA TTTCCACCTGGCTGTGGGAGGACTATTGTTACCACCGCAGACAGTGGTGTTTTGGAGGTC TCACCTATACGCTCATTTGCTCCTAGTTTTGGGATGTCTGCTGTTAATACCACAGGCAGT GGAGATAGGGAGTGGTTGCCTTCAGAAGCCACCCCTGTCAACAATGGTGATGCCTTGGTG GCAATTCCGGTTTTAGTTTTAGGAGAATCGGCTTTTCCAACTTCAGCAATAGAGGCATCC AATAAGAAAGTGGAAAGCAAGAAAATAGTGGATGAAGGACATAGCAAGGCTCACAATAGG GTCCAAGTTCGAGATGATTTTGCCGGTACCAAACAAGACGGTGACCAGCGAAATGTTGTT TCAAAAGCTACACAGAGGAATGTTTCTGATGAGAAGATGAATGGGAAATTCTCGGCACAT AAAGGGGAGCAGGTAGCACAAGAAATGGTGGATCATAAGATGAAAAATGAACTTGAAAGT AGCTTGCAAAGAAGTAATCTTAGGACACCTTTGAGCAATCCCATTGATGTAAAGGTAAAG AGGTTGGATAGTGGCAAGATGAATGCTGGATTGCTTGGTAATGCAAGGTCCTCTGCAGGT GGGAAGATGCAAAGTAAGACTCTGAGTGCTAAAAAGGAAGTGTCCTCAAATATGAACACA AAGCAAAATAAGTTTGCTCATAAGTTGAAGAGTGATGACACAAGCAAGGGTAATTTGCAT TTGTCCGCTAGGGAGTCCAAGCTTGGAACACATGTTGCAATCAATCAAATTGAAGAGCCT AACCAAATAATTGTACAAGCATTGATGGCTCCTGATAATTGCCCTTGGACACGAGGAAGA AAGTCATTTGCTAGTGCTTCCAAGTCTCTTGTTCCTAGGAACAAGCTTAAGGGAAAGGAT GGTAGTGCTTCCAAGTCTCTTGTTCGTATGAACAAGATAAAGGAAAAGGACACCACTCGA AAAGATATACTAGCAAGAAAAGTGACCTCTAATGAATCGATCAATGATGAGACAATGGAT GATAATGAGACACGAGGAAGAGAACCTATTGATAGTACTTCCAAGTGGCTTGTTCCTGTG AACAAGCTAGATGCTACTCCAAATGATATACCAGTAGGGAAAGTGGTATCTTGTGACTCG AGCAATGATGAGGCAATGGATGACAATGATGGCATTATCTTGGAAGATGATGACAACTCT AGGGCGCTAGTTGTGTATGGACAAAAACAAGAAATGTGTCTCACGGTTCTTCCGGTTGTT CCTTCCGGGTCACACCACAAGCAATCTCGGGACCATGATATAGATGCTCGAAGCAAAGTT AGGAAGTTGCTCCAGTTATTCCAGGCGACATACCGAAAGCTTACACAAGTTGAGGAACAA GGTAAACGCAAAGTTGGAAGGATTGACATTGAAGCAGCTAAGGCACTAAAGAACGACCCT ATTTATAAAAAGCTTGGGGCTGTTGTGGGAAATTTTCCCGGTGTCGAAGTTGGCGATGAA TTTCATTTTAGAGTTGAGCTGTCCATAATTGGTCTCCATGGCCCACTTCAAGCAGGTATT GCCACTTCTAAGGTGAATGGTATCAATGTTGCTATAAGTATCGTTGCCTCTGGTGGCTAT CCTGATGAATTATCAAGCTCAGATGAACTAATATACACTGGTTCCGGAGGGAAGGCTGGT GGGAATAAAGAAGGAGATGATCAAAAGCTTGAGCGGGGTAATCTTGCCTTGAAGAATTGC ATTGAAACCAAGACCCCGGTTCGTGTGATTCATGGGTTCAAAGGCCAAAATAGAAGTGAA ATTGGTCATTCTAAAGGCAAGCAAACTTCAATATTTATATATGATGGATTGTACGAAGTG TTGGAATGTTGGCAAGAAGGCCCAAAAGGCGAGAGGGTCTTCAAGTACAAGTTACAGAGG ATCGCAGGGCAACCTGAATTAGCCCTACATGCAGTTAAGGCAACGAGGAAGTCCAAAGTT CGTGAAGGTCTTTGTTTGCCTGATATATCTCAAGGAAGGGAGCGGATACCCATATGTGTC ATCAACACAATTGATGACATGAAGCCAGCACCATTTAAATACATTACCGAAGTCATATAT CCAGATTGGTATGAAAAAGAACCACCAAAAGGTTGCAACTGTACAAACGGCTGCTCGGAC TCTATTACATGTGCTTGTGCAGTGAAAAATGGAGGGGAAATCATGTTCAATTTCAACGGT GCGATCGTCGAGGCCAGGCCTCTCATATATGAGTGTGGTCCATCATGCAGGTGCCCGCCA ACATGCCACAACAGGGTGAGTCAGCATGGTGTCAAAATTCCACTAGAAATATTCAAGACA GGCAAGACAGGTTGGGGTGTAAGATCCCTCAGTTCTATATCATCAGGCAGTTTCATATGT GAGTATACCGGTGAGCTATTGGAAGATGAAGAAGCTGAAAAGAGAGAGAATGATGAGTAT CTATTTGATATTGGTCATAACTACCATGATAAAGAACTTTGGGAGGGGCTGAAGTCAGTG GTTGGTCTAGGATCTGCTACCTCATCTTCTGAGACCATGGAAGGCTTCACAATAGATGCA TCTGAGTGTGGCAATGTGGGAAGATTTATCAACCATAGTTGTTCACCAAACCTCTATGCC CAAAATGTTCTCTGGGACCATGATGATATGAGGATGCCACATGTTATGTTTTTTGCTGTT GAGAATATCCCGCCACTACAGGAGCTGACCTACCACTATAACTATAAGATAGGGGAGGTC TACATAAATGGCGAGGAGAAGGTTAAACATTGCTACTGTGGCGCCTCGGATTGCTGTGGA AGGCTCTACTGA

Peptide Sequence

PEP ID	Zm00001d005650_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:2:181987748:181992283:1 gene:Zm00001d005650 transcript:Zm00001d005650_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene119 description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH5
Sequence	MALMAPSPSSAAGPTTRPPPLSFRLRLRTDARIRWRPPPQFRLCLRTAPRGSDKVEEVAD PAAVSPVAQSCGLPHQEDDKVDDLSAVLPAARSSALPHALPQSGPERARQDGDGGENGEV QLVGGAVKLSSDGQQGDRVVQVAGPTLEVLGSCTTVGASSMQNGGEGDGLLVAAEKGCGG SSDMGQEVAANDFTEIENKTGTGELQGKENGIAGSRTKRWSSESSLNPLPKRRAVSAVRK FPPGCGRTIVTTADSGVLEVSPIRSFAPSFGMSAVNTTGSGDREWLPSEATPVNNGDALV AIPVLVLGESAFPTSAIEASNKKVESKKIVDEGHSKAHNRVQVRDDFAGTKQDGDQRNVV SKATQRNVSDEKMNGKFSAHKGEQVAQEMVDHKMKNELESSLQRSNLRTPLSNPIDVKVK RLDSGKMNAGLLGNARSSAGGKMQSKTLSAKKEVSSNMNTKQNKFAHKLKSDDTSKGNLH LSARESKLGTHVAINQIEEPNQIIVQALMAPDNCPWTRGRKSFASASKSLVPRNKLKGKD GSASKSLVRMNKIKEKDTTRKDILARKVTSNESINDETMDDNETRGREPIDSTSKWLVPV NKLDATPNDIPVGKVVSCDSSNDEAMDDNDGIILEDDDNSRALVVYGQKQEMCLTVLPVV PSGSHHKQSRDHDIDARSKVRKLLQLFQATYRKLTQVEEQGKRKVGRIDIEAAKALKNDP IYKKLGAVVGNFPGVEVGDEFHFRVELSIIGLHGPLQAGIATSKVNGINVAISIVASGGY PDELSSSDELIYTGSGGKAGGNKEGDDQKLERGNLALKNCIETKTPVRVIHGFKGQNRSE IGHSKGKQTSIFIYDGLYEVLECWQEGPKGERVFKYKLQRIAGQPELALHAVKATRKSKV REGLCLPDISQGRERIPICVINTIDDMKPAPFKYITEVIYPDWYEKEPPKGCNCTNGCSD SITCACAVKNGGEIMFNFNGAIVEARPLIYECGPSCRCPPTCHNRVSQHGVKIPLEIFKT GKTGWGVRSLSSISSGSFICEYTGELLEDEEAEKRENDEYLFDIGHNYHDKELWEGLKSV VGLGSATSSSETMEGFTIDASECGNVGRFINHSCSPNLYAQNVLWDHDDMRMPHVMFFAV ENIPPLQELTYHYNYKIGEVYINGEEKVKHCYCGASDCCGRLY

Transcript Sequence

Transcript ID	Zm00001d005650_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:181987748:181992283:1 gene:Zm00001d005650 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene119 description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH5
Sequence	CAGGTTCTTGGGATGCCCGGGGCCGGTGTGAAGCCGCCGGCGCCGCCAGTCGAGGCCGCG ACGGGGCTACCGCCGCGCAGGTTGACACCTTCGAGAGTCTCCGCCAAGCGGTCCTGGCCG CCCGGGTGCGGTCGGTTCCCTGCGCCTCTGCCCGCGCCGGCCTCTCCGGCCGCGGCAGGT CCTGAGGTGAATGGCGTTGATGGCGCCTTCACCATCGTCGGCGGCAGGGCCGACGACGAG GCCGCCCCCGCTGTCATTTCGCCTTCGGCTCAGAACGGATGCCCGGATAAGGTGGAGGCC GCCGCCACAGTTTCGCCTCTGCCTGAGAACGGCGCCCCGCGGGTCGGATAAGGTGGAAGA GGTGGCTGATCCTGCCGCCGTTTCACCTGTGGCTCAGAGTTGCGGCCTGCCTCACCAAGA GGATGATAAGGTGGACGATCTCTCAGCTGTTTTGCCTGCAGCGCGCAGCAGCGCCCTCCC ACATGCCCTGCCTCAGTCAGGGCCGGAGAGGGCTAGGCAGGATGGAGACGGTGGGGAGAA CGGAGAGGTGCAATTGGTGGGCGGTGCAGTCAAGCTGTCATCGGATGGTCAGCAAGGGGA CAGGGTGGTGCAGGTGGCAGGGCCAACGTTAGAAGTACTGGGGAGCTGTACCACTGTTGG TGCTAGTTCTATGCAGAACGGTGGCGAGGGGGATGGCTTGTTGGTGGCAGCAGAGAAGGG CTGTGGTGGCAGCAGCGATATGGGGCAGGAGGTTGCTGCTAATGATTTCACAGAGATTGA AAACAAAACAGGCACTGGTGAGTTACAGGGAAAGGAAAATGGAATTGCAGGAAGCAGAAC AAAACGGTGGTCGTCGGAATCGTCTCTGAATCCGCTGCCTAAGAGGAGGGCAGTCTCAGC CGTACGCAAATTTCCACCTGGCTGTGGGAGGACTATTGTTACCACCGCAGACAGTGGTGT TTTGGAGGTCTCACCTATACGCTCATTTGCTCCTAGTTTTGGGATGTCTGCTGTTAATAC CACAGGCAGTGGAGATAGGGAGTGGTTGCCTTCAGAAGCCACCCCTGTCAACAATGGTGA TGCCTTGGTGGCAATTCCGGTTTTAGTTTTAGGAGAATCGGCTTTTCCAACTTCAGCAAT AGAGGCATCCAATAAGAAAGTGGAAAGCAAGAAAATAGTGGATGAAGGACATAGCAAGGC TCACAATAGGGTCCAAGTTCGAGATGATTTTGCCGGTACCAAACAAGACGGTGACCAGCG AAATGTTGTTTCAAAAGCTACACAGAGGAATGTTTCTGATGAGAAGATGAATGGGAAATT CTCGGCACATAAAGGGGAGCAGGTAGCACAAGAAATGGTGGATCATAAGATGAAAAATGA ACTTGAAAGTAGCTTGCAAAGAAGTAATCTTAGGACACCTTTGAGCAATCCCATTGATGT AAAGGTAAAGAGGTTGGATAGTGGCAAGATGAATGCTGGATTGCTTGGTAATGCAAGGTC CTCTGCAGGTGGGAAGATGCAAAGTAAGACTCTGAGTGCTAAAAAGGAAGTGTCCTCAAA TATGAACACAAAGCAAAATAAGTTTGCTCATAAGTTGAAGAGTGATGACACAAGCAAGGG TAATTTGCATTTGTCCGCTAGGGAGTCCAAGCTTGGAACACATGTTGCAATCAATCAAAT TGAAGAGCCTAACCAAATAATTGTACAAGCATTGATGGCTCCTGATAATTGCCCTTGGAC ACGAGGAAGAAAGTCATTTGCTAGTGCTTCCAAGTCTCTTGTTCCTAGGAACAAGCTTAA GGGAAAGGATGGTAGTGCTTCCAAGTCTCTTGTTCGTATGAACAAGATAAAGGAAAAGGA CACCACTCGAAAAGATATACTAGCAAGAAAAGTGACCTCTAATGAATCGATCAATGATGA GACAATGGATGATAATGAGACACGAGGAAGAGAACCTATTGATAGTACTTCCAAGTGGCT TGTTCCTGTGAACAAGCTAGATGCTACTCCAAATGATATACCAGTAGGGAAAGTGGTATC TTGTGACTCGAGCAATGATGAGGCAATGGATGACAATGATGGCATTATCTTGGAAGATGA TGACAACTCTAGGGCGCTAGTTGTGTATGGACAAAAACAAGAAATGTGTCTCACGGTTCT TCCGGTTGTTCCTTCCGGGTCACACCACAAGCAATCTCGGGACCATGATATAGATGCTCG AAGCAAAGTTAGGAAGTTGCTCCAGTTATTCCAGGCGACATACCGAAAGCTTACACAAGT TGAGGAACAAGGTAAACGCAAAGTTGGAAGGATTGACATTGAAGCAGCTAAGGCACTAAA GAACGACCCTATTTATAAAAAGCTTGGGGCTGTTGTGGGAAATTTTCCCGGTGTCGAAGT TGGCGATGAATTTCATTTTAGAGTTGAGCTGTCCATAATTGGTCTCCATGGCCCACTTCA AGCAGGTATTGCCACTTCTAAGGTGAATGGTATCAATGTTGCTATAAGTATCGTTGCCTC TGGTGGCTATCCTGATGAATTATCAAGCTCAGATGAACTAATATACACTGGTTCCGGAGG GAAGGCTGGTGGGAATAAAGAAGGAGATGATCAAAAGCTTGAGCGGGGTAATCTTGCCTT GAAGAATTGCATTGAAACCAAGACCCCGGTTCGTGTGATTCATGGGTTCAAAGGCCAAAA TAGAAGTGAAATTGGTCATTCTAAAGGCAAGCAAACTTCAATATTTATATATGATGGATT GTACGAAGTGTTGGAATGTTGGCAAGAAGGCCCAAAAGGCGAGAGGGTCTTCAAGTACAA GTTACAGAGGATCGCAGGGCAACCTGAATTAGCCCTACATGCAGTTAAGGCAACGAGGAA GTCCAAAGTTCGTGAAGGTCTTTGTTTGCCTGATATATCTCAAGGAAGGGAGCGGATACC CATATGTGTCATCAACACAATTGATGACATGAAGCCAGCACCATTTAAATACATTACCGA AGTCATATATCCAGATTGGTATGAAAAAGAACCACCAAAAGGTTGCAACTGTACAAACGG CTGCTCGGACTCTATTACATGTGCTTGTGCAGTGAAAAATGGAGGGGAAATCATGTTCAA TTTCAACGGTGCGATCGTCGAGGCCAGGCCTCTCATATATGAGTGTGGTCCATCATGCAG GTGCCCGCCAACATGCCACAACAGGGTGAGTCAGCATGGTGTCAAAATTCCACTAGAAAT ATTCAAGACAGGCAAGACAGGTTGGGGTGTAAGATCCCTCAGTTCTATATCATCAGGCAG TTTCATATGTGAGTATACCGGTGAGCTATTGGAAGATGAAGAAGCTGAAAAGAGAGAGAA TGATGAGTATCTATTTGATATTGGTCATAACTACCATGATAAAGAACTTTGGGAGGGGCT GAAGTCAGTGGTTGGTCTAGGATCTGCTACCTCATCTTCTGAGACCATGGAAGGCTTCAC AATAGATGCATCTGAGTGTGGCAATGTGGGAAGATTTATCAACCATAGTTGTTCACCAAA CCTCTATGCCCAAAATGTTCTCTGGGACCATGATGATATGAGGATGCCACATGTTATGTT TTTTGCTGTTGAGAATATCCCGCCACTACAGGAGCTGACCTACCACTATAACTATAAGAT AGGGGAGGTCTACATAAATGGCGAGGAGAAGGTTAAACATTGCTACTGTGGCGCCTCGGA TTGCTGTGGAAGGCTCTACTGAAACATTATTGACTGTTGTTAGCTCTATGTTTTGAACAC CTCTGTCCTGTCTCTGCGGTACCCTTCTATTCTCAGTTCGCCTTGTCTTGTCGGCGTTCT GATGTTTACAGCAAGCTGCATTTGATCTTGCTGTTTTCATTTAGAAAAAAAAAAACATTC TGCTTCGCTCTACTGTGTTTTGAATTGTGAATGAATTTTGAATGGAACCCCGTTGT