Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005638_T016
CDS Infomation

cds chromosome:B73_RefGen_v4:2:181608659:181613611:-1 gene:Zm00001d005638 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retinol dehydrogenase 13
Sequence

ATGGCTCGCCTGTTCCGCGAGTCCCGCCGCGACTCGTCCCCCTTCTCCTCCTCCTCCAAT
GGCTTCCTCCCGCCGGCGTCCGCTTCCAGCCCCTCGGTCTCCGCGCTCCCCTCGCCGTTC
CCGGACCTCGGGGTCGCCCTCTCCACCGCGGACCTCCGGGAGGCCGCCTACGAGGTGCTG
GTCGCGGCCTCCCGCACCACGGGCGGGAAGCCCCTCACCTATATCCCCCAGTCCTCGTCG
GTGGCCGCGGGGGCCACGGCGTCCCCGGCCTCCTCCGCGTCCTCGGCATCCTCCGCCTCG
CTCCAGCGCTCCCTCACCTCTGCCGCCGCCAGCAAGATGAAGAAGGCGCTCGGGCTCCGC
TCGTCCGCCTCCTCCAAGGGTGTCGGCAGCCCCGGGAGTGGCGGGAAGGCGGCGCCCCCG
CGTAGGCCCGCCACGTTTGGGGAGCTCATGCGGGTGCAGATGCGCATCTCCGAGCCCACC
GACGCCAGGATCCGCAGGGGCCTCCTCCGCATCGCTGCCAGCCAGCTTGGCAGGCGTGCA
GAATCTATGGTGTTGCCCTTGGAATTCTTGCAGCAATTCAAGGCATCAGATTTCTCTGAT
CCTCAAGAGTATGAGGCATGGCGGAGTAGGAATCTGAAGCTTCTTGAGGCTGGTCTACTT
GTTCATCCACTCGTTCCATTGAACAAATCAGACAGTTCTGTGCAACGGTTGCGGCAAATT
ATACGGGGTGCATATGATAGGCCACTTGAAACTGGGAAAAACTCTGAGTCAATGCAGGGT
CTACGTACTTGTGTCATGTCCCTTGCTGGAAGATCTCATGATGGTACTTCTGATGGATGC
CACTGGGCAGATGGCTTCCCATTGAATCTCCATCTGTACCAAACGTTGGTAGAAGCTTGC
TTTGATAATGATGAGGGCACTGTGGTTGATGAGATCGATGAGGTGATGGAGCTCTTGAAG
AAAACCTGGGTTATTCTTGGAATTAATGAGTTGCTCCACAATCTTTGCTTTACTTGGGCA
TTGTTCAACCATTTTGTTATGTCTGGTCAAGTAGATATCGAGCTACTTTCTGCAGCAGAG
AACCAGTTAGCTGAAGTGGCTAAGGATGCGAAAACCACAAAAGATCCAAATTACTGTAAA
GTATTGAGCTCAACATTAAGCTCAATAATGGGCTGGACAGAGAAAAGACTTCTGGCATAT
CATGAAACCTTCAATACAAGTAATATTGAGTCTATGCAAGGCATTGTCTCCATTGGAGTG
TCAGCTGCAAGGGTTCTTGTTGAAGATATATCCCATGAATACCGCCGTAGAAGAAAAGAA
GAGACTGATGTAGCTCGAAGCAGGGTAGAGACATACATAAGGTCTTCACTACGGACAGCT
TTTGCTCAAAGAATGGAAGAAGCAGATTCAAAACGATCATCAAGAAACCCTACTCCAGTT
CTTTCTATCCTTGCGAAGGACATTAGTGACCTAGCTACGAAGGAGAAAAAATTGTACAGT
CCAATACTGAAGACATGGCATCCTCTTGCTTCTGGTGTTGCTGTTGCAACCCTTCATTCT
TGTTATGGAAATGAGCTGAAGCAGTTTGTAGCTGGGCTTACAGAGCTGACCCCTGATACA
GTTGAAGTACTTAAATCAGCAGACAAATTAGAGAAGGACCTTGTTAATATAGCTGTAGAA
GATTCTGTGGATAGTGATGATGGAGGCAAGTCACTAATCAGAGAGATGCCGCCATATGAA
GCTGAAAATGCAATTGCTAATCTGGTGAAAGTGTGGATAAAAGAAAGAGTAGACAGACTA
AAGGGATGGGTTGACCGGAATTTGAAGCAAGAGGTGCTCATTTTTGCCCCTTTCACCATC
AGACCTTTATTTCTTTATGTAAATAAATAG

Peptide Sequence

PEP ID

Zm00001d005638_P016
PEP Infomation

pep chromosome:B73_RefGen_v4:2:181608659:181613611:-1 gene:Zm00001d005638 transcript:Zm00001d005638_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retinol dehydrogenase 13
Sequence

MARLFRESRRDSSPFSSSSNGFLPPASASSPSVSALPSPFPDLGVALSTADLREAAYEVL
VAASRTTGGKPLTYIPQSSSVAAGATASPASSASSASSASLQRSLTSAAASKMKKALGLR
SSASSKGVGSPGSGGKAAPPRRPATFGELMRVQMRISEPTDARIRRGLLRIAASQLGRRA
ESMVLPLEFLQQFKASDFSDPQEYEAWRSRNLKLLEAGLLVHPLVPLNKSDSSVQRLRQI
IRGAYDRPLETGKNSESMQGLRTCVMSLAGRSHDGTSDGCHWADGFPLNLHLYQTLVEAC
FDNDEGTVVDEIDEVMELLKKTWVILGINELLHNLCFTWALFNHFVMSGQVDIELLSAAE
NQLAEVAKDAKTTKDPNYCKVLSSTLSSIMGWTEKRLLAYHETFNTSNIESMQGIVSIGV
SAARVLVEDISHEYRRRRKEETDVARSRVETYIRSSLRTAFAQRMEEADSKRSSRNPTPV
LSILAKDISDLATKEKKLYSPILKTWHPLASGVAVATLHSCYGNELKQFVAGLTELTPDT
VEVLKSADKLEKDLVNIAVEDSVDSDDGGKSLIREMPPYEAENAIANLVKVWIKERVDRL
KGWVDRNLKQEVLIFAPFTIRPLFLYVNK

Transcript Sequence

Transcript ID

Zm00001d005638_T016
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:181608659:181613611:-1 gene:Zm00001d005638 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retinol dehydrogenase 13
Sequence

GGGGGTTTCCCTCTCTCTCTCCTCCTCATCCCCCTCTTTCTCCACTAGAGAGCCGGGACC
TAGCACGAGAGGGAGGGAGGGAGAGAGTCACGCCGGGAGGTCACCGTCGCCGCCGACGGC
CGCGATGGCTCGCCTGTTCCGCGAGTCCCGCCGCGACTCGTCCCCCTTCTCCTCCTCCTC
CAATGGCTTCCTCCCGCCGGCGTCCGCTTCCAGCCCCTCGGTCTCCGCGCTCCCCTCGCC
GTTCCCGGACCTCGGGGTCGCCCTCTCCACCGCGGACCTCCGGGAGGCCGCCTACGAGGT
GCTGGTCGCGGCCTCCCGCACCACGGGCGGGAAGCCCCTCACCTATATCCCCCAGTCCTC
GTCGGTGGCCGCGGGGGCCACGGCGTCCCCGGCCTCCTCCGCGTCCTCGGCATCCTCCGC
CTCGCTCCAGCGCTCCCTCACCTCTGCCGCCGCCAGCAAGATGAAGAAGGCGCTCGGGCT
CCGCTCGTCCGCCTCCTCCAAGGGTGTCGGCAGCCCCGGGAGTGGCGGGAAGGCGGCGCC
CCCGCGTAGGCCCGCCACGTTTGGGGAGCTCATGCGGGTGCAGATGCGCATCTCCGAGCC
CACCGACGCCAGGATCCGCAGGGGCCTCCTCCGCATCGCTGCCAGCCAGCTTGGCAGGCG
TGCAGAATCTATGGTGTTGCCCTTGGAATTCTTGCAGCAATTCAAGGCATCAGATTTCTC
TGATCCTCAAGAGTATGAGGCATGGCGGAGTAGGAATCTGAAGCTTCTTGAGGCTGGTCT
ACTTGTTCATCCACTCGTTCCATTGAACAAATCAGACAGTTCTGTGCAACGGTTGCGGCA
AATTATACGGGGTGCATATGATAGGCCACTTGAAACTGGGAAAAACTCTGAGTCAATGCA
GGGTCTACGTACTTGTGTCATGTCCCTTGCTGGAAGATCTCATGATGGTACTTCTGATGG
ATGCCACTGGGCAGATGGCTTCCCATTGAATCTCCATCTGTACCAAACGTTGGTAGAAGC
TTGCTTTGATAATGATGAGGGCACTGTGGTTGATGAGATCGATGAGGTGATGGAGCTCTT
GAAGAAAACCTGGGTTATTCTTGGAATTAATGAGTTGCTCCACAATCTTTGCTTTACTTG
GGCATTGTTCAACCATTTTGTTATGTCTGGTCAAGTAGATATCGAGCTACTTTCTGCAGC
AGAGAACCAGTTAGCTGAAGTGGCTAAGGATGCGAAAACCACAAAAGATCCAAATTACTG
TAAAGTATTGAGCTCAACATTAAGCTCAATAATGGGCTGGACAGAGAAAAGACTTCTGGC
ATATCATGAAACCTTCAATACAAGTAATATTGAGTCTATGCAAGGCATTGTCTCCATTGG
AGTGTCAGCTGCAAGGGTTCTTGTTGAAGATATATCCCATGAATACCGCCGTAGAAGAAA
AGAAGAGACTGATGTAGCTCGAAGCAGGGTAGAGACATACATAAGGTCTTCACTACGGAC
AGCTTTTGCTCAAAGAATGGAAGAAGCAGATTCAAAACGATCATCAAGAAACCCTACTCC
AGTTCTTTCTATCCTTGCGAAGGACATTAGTGACCTAGCTACGAAGGAGAAAAAATTGTA
CAGTCCAATACTGAAGACATGGCATCCTCTTGCTTCTGGTGTTGCTGTTGCAACCCTTCA
TTCTTGTTATGGAAATGAGCTGAAGCAGTTTGTAGCTGGGCTTACAGAGCTGACCCCTGA
TACAGTTGAAGTACTTAAATCAGCAGACAAATTAGAGAAGGACCTTGTTAATATAGCTGT
AGAAGATTCTGTGGATAGTGATGATGGAGGCAAGTCACTAATCAGAGAGATGCCGCCATA
TGAAGCTGAAAATGCAATTGCTAATCTGGTGAAAGTGTGGATAAAAGAAAGAGTAGACAG
ACTAAAGGGATGGGTTGACCGGAATTTGAAGCAAGAGGTGCTCATTTTTGCCCCTTTCAC
CATCAGACCTTTATTTCTTTATGTAAATAAATAGTCATAATTCAGTAACCAATGCCGTGT
GCTGTTATAGTTTATTTCTTCAATCCATTTTCTGTATATATATGATCTATCTTCTACGCG
CTGTAGTAGCAATGTATTATATACTTGCTAAAGCGGACCCTTTTTTCATCTGCAATATAC
ATAATCATTAATGT