Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005584_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:2:179525756:179531671:-1 gene:Zm00001d005584 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 131 description:Protein SAWADEE HOMEODOMAIN HOMOLOG 2
Sequence	ATGGGTCGTCCGCCGAGCGCCGGTGCTCCGGCGTTCCGCTTCCTCCCGTCCGAGGTGGCG GAGATGGAGGCGCGCCTGCTGCAGCTCAACAACGGCATCCCCACCCGCGCCGTGCTGCAG ACCCTCGCGGATAAGTTCTCCGCTTCGCCCGAGCGCGCTGGCAAGGTGGCCATCCAGCCC AAGCAGGTGTGGAACTGGTTTCAGAACAGACGGTACTCACACCGGGCCAAAACTCCCAGG GCCGCGTCGTCACCGCCGGCTAAGATGACGCCCTCGGGAGCTGATCACCACCAGCATGCC GCTAACGCCTCCGCCTTCAGGGCTGCTCAGCTCTCTTCTGTTGCTGCTGCGCACCACGGT TCCTCCTCTACAGGGAAGAATCCTGTGGAAAGTGTCTCAGTTGAGTTTGAGGCCAAGTCA GCTCGTGATGGTGCATGGTATGATGTTGCTGCCTTTCTTTCACATAGGTTGTTTGAATCC GGTGACCCGGAGGTGCGGGTTCGTTTTTCTGGATTTGGGGCAGAGGAGGATGAATGGATC AATGTTCGCAAATGTGTGCGACAACGTTCTCTTCCATGCGAGGCCACAGAATGTGTTGCT GTGCTTCCTGGGGACCTGATTCTTTGTTTTCAGGAAGGTAAAGATCAGGCTCTCTATTAT GATGCTCATGTCCTTGATGCTCAAAGGAGAAGGCATGACGTTAGAGGTTGCCGTTGTAGA TTTCTTGTTCGCTACGACCATGATTCTTCTGAGGAAATTGTTCCACTGAGGAAGGTGTGC CGCCGACCGGAAACTGACTACAGGCTTCAGATTCTGCATGCTGCTAGAGCGGCAGCCACT AATGCAGATGTTCACACTCCACCCAAAGAGGTTAAGGTGGAGTTGGCGTCCACTGATAAG AGCCCAGCCGAGCAGAAACCCCATAAGCAGCACAAGATGATGGACGTGAACACTGATGAG GTGACCATGGTCTCCACCTTGGAGCAAGATGAGACACCAGGCAAGACTGTAGCCCCCGTA CCGTCAGCAACTGCAGAAACCCGCAATTCAAGTTCGGACACAGTGATGAAAGGTGCTGAG GCTTCCTCGGTCGTTGAAGATGACGATGAAGTGCAGGCAGTTGACAAGATGAAAGAGGGG TAG

Peptide Sequence

PEP ID	Zm00001d005584_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:2:179525756:179531671:-1 gene:Zm00001d005584 transcript:Zm00001d005584_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 131 description:Protein SAWADEE HOMEODOMAIN HOMOLOG 2
Sequence	MGRPPSAGAPAFRFLPSEVAEMEARLLQLNNGIPTRAVLQTLADKFSASPERAGKVAIQP KQVWNWFQNRRYSHRAKTPRAASSPPAKMTPSGADHHQHAANASAFRAAQLSSVAAAHHG SSSTGKNPVESVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWI NVRKCVRQRSLPCEATECVAVLPGDLILCFQEGKDQALYYDAHVLDAQRRRHDVRGCRCR FLVRYDHDSSEEIVPLRKVCRRPETDYRLQILHAARAAATNADVHTPPKEVKVELASTDK SPAEQKPHKQHKMMDVNTDEVTMVSTLEQDETPGKTVAPVPSATAETRNSSSDTVMKGAE ASSVVEDDDEVQAVDKMKEG

Transcript Sequence

Transcript ID	Zm00001d005584_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:179525756:179531671:-1 gene:Zm00001d005584 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 131 description:Protein SAWADEE HOMEODOMAIN HOMOLOG 2
Sequence	ATCCTCCTCGCCTTGACGTCCAAGAGCCCCGGTCCGATGGGTCGTCCGCCGAGCGCCGGT GCTCCGGCGTTCCGCTTCCTCCCGTCCGAGGTGGCGGAGATGGAGGCGCGCCTGCTGCAG CTCAACAACGGCATCCCCACCCGCGCCGTGCTGCAGACCCTCGCGGATAAGTTCTCCGCT TCGCCCGAGCGCGCTGGCAAGGTGGCCATCCAGCCCAAGCAGGTGTGGAACTGGTTTCAG AACAGACGGTACTCACACCGGGCCAAAACTCCCAGGGCCGCGTCGTCACCGCCGGCTAAG ATGACGCCCTCGGGAGCTGATCACCACCAGCATGCCGCTAACGCCTCCGCCTTCAGGGCT GCTCAGCTCTCTTCTGTTGCTGCTGCGCACCACGGTTCCTCCTCTACAGGGAAGAATCCT GTGGAAAGTGTCTCAGTTGAGTTTGAGGCCAAGTCAGCTCGTGATGGTGCATGGTATGAT GTTGCTGCCTTTCTTTCACATAGGTTGTTTGAATCCGGTGACCCGGAGGTGCGGGTTCGT TTTTCTGGATTTGGGGCAGAGGAGGATGAATGGATCAATGTTCGCAAATGTGTGCGACAA CGTTCTCTTCCATGCGAGGCCACAGAATGTGTTGCTGTGCTTCCTGGGGACCTGATTCTT TGTTTTCAGGAAGGTAAAGATCAGGCTCTCTATTATGATGCTCATGTCCTTGATGCTCAA AGGAGAAGGCATGACGTTAGAGGTTGCCGTTGTAGATTTCTTGTTCGCTACGACCATGAT TCTTCTGAGGAAATTGTTCCACTGAGGAAGGTGTGCCGCCGACCGGAAACTGACTACAGG CTTCAGATTCTGCATGCTGCTAGAGCGGCAGCCACTAATGCAGATGTTCACACTCCACCC AAAGAGGTTAAGGTGGAGTTGGCGTCCACTGATAAGAGCCCAGCCGAGCAGAAACCCCAT AAGCAGCACAAGATGATGGACGTGAACACTGATGAGGTGACCATGGTCTCCACCTTGGAG CAAGATGAGACACCAGGCAAGACTGTAGCCCCCGTACCGTCAGCAACTGCAGAAACCCGC AATTCAAGTTCGGACACAGTGATGAAAGGTGCTGAGGCTTCCTCGGTCGTTGAAGATGAC GATGAAGTGCAGGCAGTTGACAAGATGAAAGAGGGGTAGGGTTTTTTTTTTCTGTCACCT TTTGTTATCTAGGTCAGTGCCTGTCTTAATTACCATGTAGCATCT