Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005573_T032
CDS Infomation	cds chromosome:B73_RefGen_v4:2:178919691:178933301:-1 gene:Zm00001d005573 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 25
Sequence	ATGGCAGGCCGTCAACCAATTGTTGGAGGTATTTCTACCACATCTGTTAAAGTGGAGCCA ACAACCATGCCACCGATAGTTTCTGCACCTGCTTTCTCGCATGTAACGCCTATTTCAAAT GTGGCTTCACAAGGAATATCAGCACTGCAAACCTCATCACCTTCTCTTATTTCACAAGAA GCAAATATGGGAAATGATAATGTACAAGAACACAAGCCTATAATAAACCCAGTTCAACAA CCGATTCGGCCTGGTGGTCATGGCAGCCTCCTCAACAATCTGTCACAGGTTCGGTTGATG AACTCAACTTCTTTAGGAGGAGGAGCTACCTCGATGGGACTGCCTAACATGGGAGCAACA CCAATACAAGTCCACATGTCAAACATGATATCAAGCGGCATGACATCAACACCCTCTGTC ATCTCCTCTATGTCTGGACCTGGACAACCTATTAGTACTCAACAGATGGTACAGAGCACA GCTCTTGGTTCGTTTGGCTCAAACACTCCTACTGTTACAGGCAATTCAACTATTGCTGTA TCATCCTCTTTGACTAACAACCAAAGCAGCATGGGCATGGGTCAATCTGTGCAATCTGTG GCACAGGGAGGCTTGGTGTCTGGTTCACAATTAGGACAAGGTGGAATTGTTGCAAACCAA AATGTGATGAGCACCCTTGGACCTACAGCTATCTCTTCAACGCCTGCGATGATGCCGACA CCTGGGATGGTCCCACAGACAGGAGTCAATTCCTTAGGTGTGAATAACAATTCTGCTATG AATATGCCTATTACGCAGCAGCATGCCAATGCCCAACAGCCGCCACCAAAGTACGTCAAA ATTTGGGAGGGAACTTTATCTGGCCAAAGGCAAGGACAGCCTGTAATAATTTGTAAACTC GAAGGTTATAGGAGTGGAACAGCGTCTGAAACACTTGCAGCGGACTGGCCAGAAACAATG CAGATTGTTCGCCTCATAGCCCAGGAGCATATGAACAACAAACAATATGTTGGCAAGGCA GACTTTCTAGTTTTTCGGACTTTAAATCACCATGGGTTTCTTGTACAACTACAAGAGAAG AAGCTGTGTGCTGTGATACAGTTACCATCGCAAACTCTGTTGCTGTCGATGGCTGACAAA GCAGGTCGTTTGATTGGCATGCTCTTCCCTGGGGACATGGTGGTGTTCAAACCGCAGGCC TCAACTCAGCAGACACCAATGCAGCAACAGCAGCTACAGCAATTTCAACAGCAGCAGCAG CAGCTGCAACAACACATGCATATGCAGCCGCAAGGCCTCCCACTTCAGCAATCACAGATG CAACTCCAGCAACAGCAGCCGCAGATGCAACCGATGCAGCAGCAGCAACCTTCGCAGATG CAGCAGCAGATGCAATCGATGCAGCAGCAGATGCAGCCAATGCAGCAGCAAATGCAGCAT CAACAGCAACAGATGCAGCATCAACAGCAACAGATGCAGCAAATGCAGCAGCAGCAGCAG CAACAACAACAACAACAACAACAGATACAGCCTCAGCAGCAACAGATGCAGCAAATGCAG CAGCAGCAGCAGCAACAGATGCAGCCTCAACAGCAACAGATGCAGCAAATGCAGCAGCAG CAGCAACAGATGCAGCCTCAACAGCAACAGATGCAGCAAATGCAGCAGCAGCAGCAACAG ATGCAGCCTCAACAGCAGCAGCAACCCCAGATGGTGGGTACAGGAATGGGGCAGCAGTTC ATGCAGGGGCACAATCGGGCAGTGCAGATGATGCAAGGGAAGATTACGCCACAGGGGCCG GGCAGCATGCCTGGGGGAGGCTTCCTACCTTAA

Peptide Sequence

PEP ID	Zm00001d005573_P032
PEP Infomation	pep chromosome:B73_RefGen_v4:2:178919691:178933301:-1 gene:Zm00001d005573 transcript:Zm00001d005573_T032 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 25
Sequence	MAGRQPIVGGISTTSVKVEPTTMPPIVSAPAFSHVTPISNVASQGISALQTSSPSLISQE ANMGNDNVQEHKPIINPVQQPIRPGGHGSLLNNLSQVRLMNSTSLGGGATSMGLPNMGAT PIQVHMSNMISSGMTSTPSVISSMSGPGQPISTQQMVQSTALGSFGSNTPTVTGNSTIAV SSSLTNNQSSMGMGQSVQSVAQGGLVSGSQLGQGGIVANQNVMSTLGPTAISSTPAMMPT PGMVPQTGVNSLGVNNNSAMNMPITQQHANAQQPPPKYVKIWEGTLSGQRQGQPVIICKL EGYRSGTASETLAADWPETMQIVRLIAQEHMNNKQYVGKADFLVFRTLNHHGFLVQLQEK KLCAVIQLPSQTLLLSMADKAGRLIGMLFPGDMVVFKPQASTQQTPMQQQQLQQFQQQQQ QLQQHMHMQPQGLPLQQSQMQLQQQQPQMQPMQQQQPSQMQQQMQSMQQQMQPMQQQMQH QQQQMQHQQQQMQQMQQQQQQQQQQQQQIQPQQQQMQQMQQQQQQQMQPQQQQMQQMQQQ QQQMQPQQQQMQQMQQQQQQMQPQQQQQPQMVGTGMGQQFMQGHNRAVQMMQGKITPQGP GSMPGGGFLP

Transcript Sequence

Transcript ID	Zm00001d005573_T032
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:178919691:178933301:-1 gene:Zm00001d005573 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 25
Sequence	GGCGAGGCCAAGCCGGGGGTGGGATTACCGGGAGCACGCTGACTGGGATCACGGCGGATG GCGGCGGCGGATAGGCAGTTGGTAGTTGCCGTCGAGGGGACCGCGGCGCTGGGGCCCTAC TGGTCCACCATTGTGGCGGAGTACGTCGAGAAGATCGTGAGGAGCTTTTGTGCAAGTGAA CTGCCAGGCCAGAAGCTTGTGGGTACTCCGCCTGAACTTGCATTAGTTGTTTTTCATACC CATGGACCTTACAGTGCTTTTGATGTGCAGCGAAGTGGATGGACAAAAGATGTCGATGCT TTCCTATCATGGTTATCTGGAATATTGTTCAGTGGTGGAGGATTCAGTGAAGCTTCTACT TGTGAAGGTCTTGCTGAAGCATTGAAGATACTTCAAGGCAATCCTAATACAACCCAAGGT CATCAAAACCATGAAGCACAAAAGCATTGCATACTTGTCGCTGCAAGTAATCCTTATCCT CTGCCAACACCTGTATACTGTCTTCCTACTCAAAGTACTGATCACAAAGAGAACATTGAG ACATCAAAAGAACCTTCAATTGCTGATGCTGAGACCGTTGCAAAGTCATTTGCTCAGTGC TCTGTCTCATTGTCAGTGATATCTCCAAAACAGCTTCCAACATTAAAGGCAATATACAAT GCGGGCAAGCGAAATCTTCGGGCTGCTGATCCATCAGTCGACCATGCGAAAAATCCACAC TTCCTTGTTTTGCTCTCTGAGAATTTCATGGAGGCACGGACTGCTCTTAGTCGCCCTTTA CATGGAAACTTGGCTCCAAATCAAACCATAACGAAGATGGACACGGCACCTGCAGTGACT ATGCCAGGACCAACATCAAATGGGAAAACTTGTAAAAGAGGTTAAGGCGTTCACACTTAG TTTAGTGAGAATTGGTTTATCAAATAATTCCAATTTGACTCAAGGAAAAATTAAATAAGT CAATTTATTCTGGAAATTACCCTTCGGTCTGCATGCCTAACATATGACAGAAAAAGTAAT GGCTAATATATTCTTGGGATGGCTAACTATTTCATAGCAGGCATAGATTTGCATATGCTA TTCCATTATCTATTTTTTCATAAGGTGTACCTTTGTGTTGTGAAGCATTGTGCTTATGAT GCTTTATACTAGCGAGAACACATAAGATATTTGGATTACTTTTGGCTCTGTTGAGGTTTG ATTGTTTGTTGTGCACTGAAATGTTCTACCTTCAGTTTGCTGAATTGAAATATTTTCTAT CCTATGATTACAAAATTGAGCATACTAACATTGGAGTCATGCTATATATATCTTGTCGCT TGTATCAGTGGATGCCCATATGTTCTCCTGTCAGTGTGGATGAATGTTTTGCTCAAATAC CATTTGAATATGACAGATGACCAAGTACCCTGAAGTTTTTAATTGGCAAGCTGTCCACAG CTAATTGTTTGCGCTATTTAGAGTCCCAAGACGTTGGTCTATCATTTGTTTTTGTGTTAT TTAGTCGCAAGATGTTGGTAAGTCATTTGTTTAAATCAACCAAAATTTATCATAGTTAAC AGTGATTGATATATTGTGAGGCTTTACACTCATTAACTTAAACGTATCTGCATAAATATG CAGTACTCCGGTACATCAGTTCTTGTTAAGTGGCCACAACATTTGTTCGTGGAATAAATT TGTAGTAGTCTAAAGTTGCTATGTGTCATAGAACACTTGTTAGTCACATTTCCCACTTTC AAAAGTTCATCTGTAATCTTTAAATAATGCTGTTATGATAAGTTGATTCATCTAATATTG TAGTTTGCTTTTGCCTGTTTATCCATGTTATTGCCTACGTTGACATGATGACTAATTCCA TTTGAACATTTCTAGTGAATGCAATGGCAGGCCGTCAACCAATTGTTGGAGGTATTTCTA CCACATCTGTTAAAGTGGAGCCAACAACCATGCCACCGATAGTTTCTGCACCTGCTTTCT CGCATGTAACGCCTATTTCAAATGTGGCTTCACAAGGAATATCAGCACTGCAAACCTCAT CACCTTCTCTTATTTCACAAGAAGCAAATATGGGAAATGATAATGTACAAGAACACAAGC CTATAATAAACCCAGTTCAACAACCGATTCGGCCTGGTGGTCATGGCAGCCTCCTCAACA ATCTGTCACAGGTTCGGTTGATGAACTCAACTTCTTTAGGAGGAGGAGCTACCTCGATGG GACTGCCTAACATGGGAGCAACACCAATACAAGTCCACATGTCAAACATGATATCAAGCG GCATGACATCAACACCCTCTGTCATCTCCTCTATGTCTGGACCTGGACAACCTATTAGTA CTCAACAGATGGTACAGAGCACAGCTCTTGGTTCGTTTGGCTCAAACACTCCTACTGTTA CAGGCAATTCAACTATTGCTGTATCATCCTCTTTGACTAACAACCAAAGCAGCATGGGCA TGGGTCAATCTGTGCAATCTGTGGCACAGGGAGGCTTGGTGTCTGGTTCACAATTAGGAC AAGGTGGAATTGTTGCAAACCAAAATGTGATGAGCACCCTTGGACCTACAGCTATCTCTT CAACGCCTGCGATGATGCCGACACCTGGGATGGTCCCACAGACAGGAGTCAATTCCTTAG GTGTGAATAACAATTCTGCTATGAATATGCCTATTACGCAGCAGCATGCCAATGCCCAAC AGCCGCCACCAAAGTACGTCAAAATTTGGGAGGGAACTTTATCTGGCCAAAGGCAAGGAC AGCCTGTAATAATTTGTAAACTCGAAGGTTATAGGAGTGGAACAGCGTCTGAAACACTTG CAGCGGACTGGCCAGAAACAATGCAGATTGTTCGCCTCATAGCCCAGGAGCATATGAACA ACAAACAATATGTTGGCAAGGCAGACTTTCTAGTTTTTCGGACTTTAAATCACCATGGGT TTCTTGTACAACTACAAGAGAAGAAGCTGTGTGCTGTGATACAGTTACCATCGCAAACTC TGTTGCTGTCGATGGCTGACAAAGCAGGTCGTTTGATTGGCATGCTCTTCCCTGGGGACA TGGTGGTGTTCAAACCGCAGGCCTCAACTCAGCAGACACCAATGCAGCAACAGCAGCTAC AGCAATTTCAACAGCAGCAGCAGCAGCTGCAACAACACATGCATATGCAGCCGCAAGGCC TCCCACTTCAGCAATCACAGATGCAACTCCAGCAACAGCAGCCGCAGATGCAACCGATGC AGCAGCAGCAACCTTCGCAGATGCAGCAGCAGATGCAATCGATGCAGCAGCAGATGCAGC CAATGCAGCAGCAAATGCAGCATCAACAGCAACAGATGCAGCATCAACAGCAACAGATGC AGCAAATGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAGATACAGCCTCAGC AGCAACAGATGCAGCAAATGCAGCAGCAGCAGCAGCAACAGATGCAGCCTCAACAGCAAC AGATGCAGCAAATGCAGCAGCAGCAGCAACAGATGCAGCCTCAACAGCAACAGATGCAGC AAATGCAGCAGCAGCAGCAACAGATGCAGCCTCAACAGCAGCAGCAACCCCAGATGGTGG GTACAGGAATGGGGCAGCAGTTCATGCAGGGGCACAATCGGGCAGTGCAGATGATGCAAG GGAAGATTACGCCACAGGGGCCGGGCAGCATGCCTGGGGGAGGCTTCCTACCTTAAGCAC CTTTTATCAGCAGGCATCAGATGAATTGAGGGTTTACACTGACCCAAGTGTTGAGATGTC AACTTCATTTGACAGGGTTAGGGAATAGTCACTCGGGGAGTGTTGCTAAAACTTAATCTG AAAACTTAAGCATCCCTGTCACCGATAGGTAAATGCCAGATGTCCATGCATAGGTGCATA CTTTATGATATGGTGGTGTACTCGTAATCTTGAGTGACTTT