Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005535_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:2:177656057:177674448:-1 gene:Zm00001d005535 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aspartate kinase homoserine dehydrogenase2 description:Bifunctional aspartokinase/homoserine dehydrogenase 2%2C chloroplastic Aspartokinase Homoserine dehydrogenase
Sequence	ATGTGGTCTGTGCACAAGTTCGGTGGAACCTGTATGGGAACTCCCAAAAGAATCCAGTGT GTTGCAAATATAGTTCTTGGTGATTCTTCTGAGAGGAAGCTGATCATTGTTTCCGCAATG TCCAAAGTAACTGACATGATGTACAACCTTGTACAAAAGGCTCAGTCACGGGATGATTCA TATGCAATAGCACTGGCAGAAGTTTTTGAGAAGCATATGACTGCAGCAAAGGATCTTCTT GACGGAGAAGATCTTGCAAGATTCTTGTCTCAGTTGCATTCAGACGTCAGCAACTTGCGA GCCATGCTCCGTGCTATTTATATAGCTGGGCATGCGACAGAATCTTTCTCTGACTTTGTT GTTGGGCATGGAGAGTTGTGGTCTGCGCAGATGCTGTCGTATGCAATAAAGAAGTCTGGG GCACCCTGCAGTTGGATGGATACAAGAGAAGTTCTAGTTGTAACACCCAGTGGTTGTAAT CAAGTAGACCCTGATTACTTGGAATGTGAGAAGCGACTTCAGAAATGGTTTTCTCGACAA CCAGCTGAGATAATAGTTGCTACAGGATTTATTGCAAGTACAGCTGGAAACATTCCAACA ACTCTAAAAAGGGATGGAAGTGATTTCTCAGCAGCCATAGTTGGTTCTCTTGTCAGGGCA CGCCAGGTCACTATTTGGACTGATGTTGACGGGGTATTTAGCGCAGATCCTAGAAAAGTT AGTGAGGCTGTGATCTTAAGCACTCTGTCTTACCAGGAGGCCTGGGAAATGTCATATTTT GGGGCAAATGTTTTGCATCCGCGCACCATTATACCTGTGATGAAAGACAACATTCCCATT GTTATTAGGAACATGTTCAACCTCTCTGCCCCTGGAACCATGATTTGCAAGCAGCCTGCC AATGAAAATGGTGATTTAGACGCATGTGTCAAATCATTTGCTACTGTCGATAATTTAGCA CTTGTTAATGTTGAAGGAACTGGAATGGCTGGCGTTCCAGGTACAGCAAGTGCTATATTT AGTGCTGTTAAGGATGTTGGAGCTAATGTTATCATGATATCTCAGGCTAGCAGCGAACAT TCAGTATGCTTTGCTGTTCCAGAAAAGGAAGTTGCTGTAGTTTCTGCTGAGTTACATGAT AGGTTTCGTGAGGCATTAGCTGCAGGGAGGCTGTCTAAGGTTGAAGTTATTAATGGTTGC AGCATTCTTGCTGCTGTTGGTCTGAGGATGGCCAGCACTCCAGGAGTCAGTGCAATACTT TTTGATGCATTAGCAAAGGCAAACATTAATGTTCGAGCAATAGCTCAAGGTTGCAGTGAA TACAATATTACTGTTGTATTGAAGCAACAAGATTGTGTAAGGGCTCTGAGAGCTGCTCAC TCAAGGTTCTTCCTCTCCAAAACCACACTTGCTGTTGGGATCATTGGACCTGGTTTAATT GGTGGAGCACTCCTTAACCAGTTGAAGAATCAGACTGCTGTTCTCAAGGAAAATATGAAC ATTGATCTGCGTGTCATTGGAATAACTGGCTCAAGTACAATGCTTCTGAGCGACACGGGA ATAGACTTAACCCAGTGGAAACAGCTTCTACAAAAGGAAGCAGAACCAGCTGATATTGGT AGTTTTGTTCATCATTTATCTGATAATCATGTATTTCCGAACAAAGTTTTGGTGGACTGC ACAGCGGATACAAGTGTGGCATCCCACTATTACGATTGGTTAAAGAAGGGTATTCATGTC ATCACGCCAAATAAGAAAGCAAATTCTGGGCCACTTGATCAGTACCTGAAATTACGGACT ATGCAGCGTGCCTCATACACTCATTACTTTTATGAAGCAACTGTTGGTGCTGGCCTCCCA ATCATCAGCACCTTGCGAGGTCTTCTGGAGACGGGTGACAAGATACTGCGTATTGAGGGC ATTTTCAGTGGAACTTTGAGTTATATATTTAACAATTTCGAAGGAACAAGGGCGTTTAGT GATGTTGTTGCCGAAGCAAGAGAGGCGGGATACACTGAACCTGACCCAAGGGATGATCTA TCTGGAACTGACGTTGCCCGAAAGGTCGTTGTCCTCGCGAGGGAATCTGGTCTGAGGCTT GAACTTTCTGACATTCCTGTGAAGAGCCTTGTGCCAGAAACACTTGCATCATGCTCGTCA GCAGATGAATTCATGCAGAAGCTACCGTCCTTCGACGAGGACTGGGCCAGGCAACGCAGT GATGCTGAGGCTGCAGGCGAAGTCCTGCGTTACGTTGGAGCGTTGGATGCGGTGAACAGG AGCGGACAGGTGGAGCTACGCAGGTACAGGAGGGACCACCCGTTCGCGCAGCTCTCCGGC TCCGACAACATCATCGCCTTCACCACGTCGAGGTACAAGGAGCAGCCGCTGATCGTGCGG GGTCCGGGTGCCGGCGCGGAGGTGACAGCCGGTGGCGTCTTCTGCGACATTCTGCGGCTG GCGTCTTACCTCGGTGCTCCTTCTTGA

Peptide Sequence

PEP ID	Zm00001d005535_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:2:177656057:177674448:-1 gene:Zm00001d005535 transcript:Zm00001d005535_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aspartate kinase homoserine dehydrogenase2 description:Bifunctional aspartokinase/homoserine dehydrogenase 2%2C chloroplastic Aspartokinase Homoserine dehydrogenase
Sequence	MWSVHKFGGTCMGTPKRIQCVANIVLGDSSERKLIIVSAMSKVTDMMYNLVQKAQSRDDS YAIALAEVFEKHMTAAKDLLDGEDLARFLSQLHSDVSNLRAMLRAIYIAGHATESFSDFV VGHGELWSAQMLSYAIKKSGAPCSWMDTREVLVVTPSGCNQVDPDYLECEKRLQKWFSRQ PAEIIVATGFIASTAGNIPTTLKRDGSDFSAAIVGSLVRARQVTIWTDVDGVFSADPRKV SEAVILSTLSYQEAWEMSYFGANVLHPRTIIPVMKDNIPIVIRNMFNLSAPGTMICKQPA NENGDLDACVKSFATVDNLALVNVEGTGMAGVPGTASAIFSAVKDVGANVIMISQASSEH SVCFAVPEKEVAVVSAELHDRFREALAAGRLSKVEVINGCSILAAVGLRMASTPGVSAIL FDALAKANINVRAIAQGCSEYNITVVLKQQDCVRALRAAHSRFFLSKTTLAVGIIGPGLI GGALLNQLKNQTAVLKENMNIDLRVIGITGSSTMLLSDTGIDLTQWKQLLQKEAEPADIG SFVHHLSDNHVFPNKVLVDCTADTSVASHYYDWLKKGIHVITPNKKANSGPLDQYLKLRT MQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGTRAFS DVVAEAREAGYTEPDPRDDLSGTDVARKVVVLARESGLRLELSDIPVKSLVPETLASCSS ADEFMQKLPSFDEDWARQRSDAEAAGEVLRYVGALDAVNRSGQVELRRYRRDHPFAQLSG SDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS

Transcript Sequence

Transcript ID	Zm00001d005535_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:177656057:177674448:-1 gene:Zm00001d005535 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aspartate kinase homoserine dehydrogenase2 description:Bifunctional aspartokinase/homoserine dehydrogenase 2%2C chloroplastic Aspartokinase Homoserine dehydrogenase
Sequence	TCAGGATAGGTCAGTCTCAAGGAAGTTTGCACAGACATCGCTCTACAAATTTTCTCAGAC CAGCTGCTGCAGCTATTTCAGTTGAACAAGATGAAGTCAATACTTATCTTCCAAAAGGTG ATATGTGGTCTGTGCACAAGTTCGGTGGAACCTGTATGGGAACTCCCAAAAGAATCCAGT GTGTTGCAAATATAGTTCTTGGTGATTCTTCTGAGAGGAAGCTGATCATTGTTTCCGCAA TGTCCAAAGTAACTGACATGATGTACAACCTTGTACAAAAGGCTCAGTCACGGGATGATT CATATGCAATAGCACTGGCAGAAGTTTTTGAGAAGCATATGACTGCAGCAAAGGATCTTC TTGACGGAGAAGATCTTGCAAGATTCTTGTCTCAGTTGCATTCAGACGTCAGCAACTTGC GAGCCATGCTCCGTGCTATTTATATAGCTGGGCATGCGACAGAATCTTTCTCTGACTTTG TTGTTGGGCATGGAGAGTTGTGGTCTGCGCAGATGCTGTCGTATGCAATAAAGAAGTCTG GGGCACCCTGCAGTTGGATGGATACAAGAGAAGTTCTAGTTGTAACACCCAGTGGTTGTA ATCAAGTAGACCCTGATTACTTGGAATGTGAGAAGCGACTTCAGAAATGGTTTTCTCGAC AACCAGCTGAGATAATAGTTGCTACAGGATTTATTGCAAGTACAGCTGGAAACATTCCAA CAACTCTAAAAAGGGATGGAAGTGATTTCTCAGCAGCCATAGTTGGTTCTCTTGTCAGGG CACGCCAGGTCACTATTTGGACTGATGTTGACGGGGTATTTAGCGCAGATCCTAGAAAAG TTAGTGAGGCTGTGATCTTAAGCACTCTGTCTTACCAGGAGGCCTGGGAAATGTCATATT TTGGGGCAAATGTTTTGCATCCGCGCACCATTATACCTGTGATGAAAGACAACATTCCCA TTGTTATTAGGAACATGTTCAACCTCTCTGCCCCTGGAACCATGATTTGCAAGCAGCCTG CCAATGAAAATGGTGATTTAGACGCATGTGTCAAATCATTTGCTACTGTCGATAATTTAG CACTTGTTAATGTTGAAGGAACTGGAATGGCTGGCGTTCCAGGTACAGCAAGTGCTATAT TTAGTGCTGTTAAGGATGTTGGAGCTAATGTTATCATGATATCTCAGGCTAGCAGCGAAC ATTCAGTATGCTTTGCTGTTCCAGAAAAGGAAGTTGCTGTAGTTTCTGCTGAGTTACATG ATAGGTTTCGTGAGGCATTAGCTGCAGGGAGGCTGTCTAAGGTTGAAGTTATTAATGGTT GCAGCATTCTTGCTGCTGTTGGTCTGAGGATGGCCAGCACTCCAGGAGTCAGTGCAATAC TTTTTGATGCATTAGCAAAGGCAAACATTAATGTTCGAGCAATAGCTCAAGGTTGCAGTG AATACAATATTACTGTTGTATTGAAGCAACAAGATTGTGTAAGGGCTCTGAGAGCTGCTC ACTCAAGGTTCTTCCTCTCCAAAACCACACTTGCTGTTGGGATCATTGGACCTGGTTTAA TTGGTGGAGCACTCCTTAACCAGTTGAAGAATCAGACTGCTGTTCTCAAGGAAAATATGA ACATTGATCTGCGTGTCATTGGAATAACTGGCTCAAGTACAATGCTTCTGAGCGACACGG GAATAGACTTAACCCAGTGGAAACAGCTTCTACAAAAGGAAGCAGAACCAGCTGATATTG GTAGTTTTGTTCATCATTTATCTGATAATCATGTATTTCCGAACAAAGTTTTGGTGGACT GCACAGCGGATACAAGTGTGGCATCCCACTATTACGATTGGTTAAAGAAGGGTATTCATG TCATCACGCCAAATAAGAAAGCAAATTCTGGGCCACTTGATCAGTACCTGAAATTACGGA CTATGCAGCGTGCCTCATACACTCATTACTTTTATGAAGCAACTGTTGGTGCTGGCCTCC CAATCATCAGCACCTTGCGAGGTCTTCTGGAGACGGGTGACAAGATACTGCGTATTGAGG GCATTTTCAGTGGAACTTTGAGTTATATATTTAACAATTTCGAAGGAACAAGGGCGTTTA GTGATGTTGTTGCCGAAGCAAGAGAGGCGGGATACACTGAACCTGACCCAAGGGATGATC TATCTGGAACTGACGTTGCCCGAAAGGTCGTTGTCCTCGCGAGGGAATCTGGTCTGAGGC TTGAACTTTCTGACATTCCTGTGAAGAGCCTTGTGCCAGAAACACTTGCATCATGCTCGT CAGCAGATGAATTCATGCAGAAGCTACCGTCCTTCGACGAGGACTGGGCCAGGCAACGCA GTGATGCTGAGGCTGCAGGCGAAGTCCTGCGTTACGTTGGAGCGTTGGATGCGGTGAACA GGAGCGGACAGGTGGAGCTACGCAGGTACAGGAGGGACCACCCGTTCGCGCAGCTCTCCG GCTCCGACAACATCATCGCCTTCACCACGTCGAGGTACAAGGAGCAGCCGCTGATCGTGC GGGGTCCGGGTGCCGGCGCGGAGGTGACAGCCGGTGGCGTCTTCTGCGACATTCTGCGGC TGGCGTCTTACCTCGGTGCTCCTTCTTGAGCTTCTACTAGCTACAGGTGCCAGTTTCAGG AAGCAGACGGAGACACACTGCCATGCATGATGCCTCCCCTCCGTGTTTGGGCTATT