Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005484_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:2:175599159:175605230:-1 gene:Zm00001d005484 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phospholipase D12 description: phospholipase D12
Sequence

ATGGGGAAGCACTCAGCTGAATCTGGGGTTAGTATGTTGTTGCATGGAGACTTGGACATA
CAAATAATTGAAGCAAAATGTCTCCCCAATATGGATCTCATGACAGAAAGGATGCGAAAA
TGCTTTACTGGGTATGGAGCTTGCAGCAATGATTGTGGGAAGTCGGAACCACCACACCCG
GACATGAGAAAGATCATCACTAGTGATCCATACGTTTCAGTTTGTCTGTCAGGAGCAACG
GTGGCACAAACTCGAGTCATTGCCAACTCGGAGAACCCTAAATGGGATGAACACTTCTAT
GTTCAAGTTGCTCATTCAGTTAGCAGAGTCGAGTTTCATGTAAAGGACAACGATGTTTTT
GGGGCAGAGCTTATCGGCGTGGCTTCAATACCAGTTGAGCACATCATGCCAGGTGATTTG
GTCGGTGGCTGGTTTCCCATTTCTGGTCAGTACAGTAATCCTATGAAGCCATCTCCTGAG
CTGCATTTGTCTATCCAGTATAAGCCAATCGACACAAACCCACTATACAAGGATGGAGTT
GGTGCTGATGGCCATCAGAGTGTTGGTGTCCCAAATGCATATTTCCCTCTTAGGAAGGGT
GGTAAGGTCACACTATATCAAGATGCTCATGTTCCTGACAATTTTCAACCTCATATTGAG
ATGGATGATGGGAGGACATATGAACAAAACAAATGCTGGGAAGATATTTGTCATGCAATC
ATTGAGGCTCATCACCTTATCTACATAGTCGGCTGGTCCTTGTATCACCCTGTGAAGCTT
GTAAGGGAATCAACAAAACCTGTTCCCAATGGAAACCCAGTCACTATTGGGGAAATTTTG
AAACGCAAAGTTCAAGAAGGAGTCCGTGTTATAGTGTTGCTTTGGGATGATAAAACATCA
CATGACAAATTTCTCTTAAAAACAGATGGTCTCATGCATACACATGATGAGGAAGCTCGA
AAATATTTCAGACATTCAGGTGTCCATTGTGTGTTGTCTCCTCGCTATGCCAGCAACAAA
CTTAGCATTTTCAAGCAGCAGGTTGTAGGAACTTTGTTTACACACCATCAGAAATGTGTC
ATTGTAGACACCCAAGCCACAGGAAACAATCGAAAAATAACTGCTTTTATTGGTGGTCTA
GACTTGTGTGATGGCAGATATGATACACCTGAACACAGGCTTTTCAAGGATTTAGATACT
ATTTTCAAGGACGATTTCCACAACCCGACATTCCCTGTTAATAAGAATGGACCCAGACAG
CCATGGCATGATTTACATTGTAAAATTGAGGGTCCTGCTGCATATGATATACTTACAAAC
TTTGAACAGAGATGGAGAAAATCTGCAAAGTGGAAAGTTAGCGTCAGAAGAGCTGTGAGT
TGGCATCATGATACATTGGTAAAAATTGATCGGATGTCATGGATTGTTTCCCCCTCTTCA
GATGAATTAAATGCACATGTTTGTGAAGAAAAGGACCCTGAAAACTGGCATGTACAGGTT
TTCCGATCGATTGATTCAGGATCTGTAAAAGGATTCCCAAAACTTGTTCAAGAGGCTGAA
TCCCAGAATCTTGTCTGTGCAAAGAATCTGCAGATAGACAAAAGCATACACAATGCATAT
GTTAAAGCGATCAGATCTGCACAGCACTTCGTCTATATTGAAAATCAGTACTTTATTGGG
TCTTCATACTACTGGTCTGCACACCGAAGTGCAGGTGCTGAGAACTTAATACCAATTGAA
TTGGCCATAAAGATTGCAAGAAAGATTAAGGCAAAGGAAAGGTTTGCAGCATACATTGTT
ATACCGATGTGGCCTGAAGGGAATCCGACAACTGCCGCTATGCAGGAAATCCTCTATTGG
CAGGGGCATACCATGTCCATGATGTACAAGATTGTCGCAGATGCTCTACGAAAGGAGGGT
TTACATGAAAGGCATCCACAGGAGTACCTGAACTTCTATTGCCTTGGCAAACGTGAAGTC
TCGAATGAAGTTCCGACGACAGGCAATTCTAATGAGAACTCTGCAGTGCGTTTGTCCCAG
AAATTCAAGAGGTTCATGATCTATGTGCACTCAAAAGGGATGATTGTGGACGACGAGTAT
GTTCTCATCGGATCGGCCAACATAAACCAGAGATCCATGGACGGCTCACGGGACACGGAG
ATCGCCATGGGTGCATACCAGCCTCACTACAGCTGGGCTGGAAGCGGCAGGCCTCCCAGA
GGACAGGTGTATGGGTACAGGATGTCTCTTTGGGCGGAGCACCTGGGCACAGTGCAGGAG
TGTTTCCGCCGGCCAGAGTCCGAGGAGTGCGTGCAGCAGGTGAACCAGATGGCAGATGAC
AACTGGGCGAGCTATGTCTCGCCGCAGATGGCGGATATGAAGGGCCACCTCATGAAGTAC
CCCGTGAGGGTCGAGCAGGATGGGAGGGTGGGGCCGCTGCATGGGCAGGAGAGCTTCCCA
GACGTCGGTGGCAAGGTGCTGGGGACGCACTCGTCGCTCCCCAATGCGTTGACGACGTGA

Peptide Sequence

PEP ID

Zm00001d005484_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:2:175599159:175605230:-1 gene:Zm00001d005484 transcript:Zm00001d005484_T012 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phospholipase D12 description: phospholipase D12
Sequence

MGKHSAESGVSMLLHGDLDIQIIEAKCLPNMDLMTERMRKCFTGYGACSNDCGKSEPPHP
DMRKIITSDPYVSVCLSGATVAQTRVIANSENPKWDEHFYVQVAHSVSRVEFHVKDNDVF
GAELIGVASIPVEHIMPGDLVGGWFPISGQYSNPMKPSPELHLSIQYKPIDTNPLYKDGV
GADGHQSVGVPNAYFPLRKGGKVTLYQDAHVPDNFQPHIEMDDGRTYEQNKCWEDICHAI
IEAHHLIYIVGWSLYHPVKLVRESTKPVPNGNPVTIGEILKRKVQEGVRVIVLLWDDKTS
HDKFLLKTDGLMHTHDEEARKYFRHSGVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCV
IVDTQATGNNRKITAFIGGLDLCDGRYDTPEHRLFKDLDTIFKDDFHNPTFPVNKNGPRQ
PWHDLHCKIEGPAAYDILTNFEQRWRKSAKWKVSVRRAVSWHHDTLVKIDRMSWIVSPSS
DELNAHVCEEKDPENWHVQVFRSIDSGSVKGFPKLVQEAESQNLVCAKNLQIDKSIHNAY
VKAIRSAQHFVYIENQYFIGSSYYWSAHRSAGAENLIPIELAIKIARKIKAKERFAAYIV
IPMWPEGNPTTAAMQEILYWQGHTMSMMYKIVADALRKEGLHERHPQEYLNFYCLGKREV
SNEVPTTGNSNENSAVRLSQKFKRFMIYVHSKGMIVDDEYVLIGSANINQRSMDGSRDTE
IAMGAYQPHYSWAGSGRPPRGQVYGYRMSLWAEHLGTVQECFRRPESEECVQQVNQMADD
NWASYVSPQMADMKGHLMKYPVRVEQDGRVGPLHGQESFPDVGGKVLGTHSSLPNALTT

Transcript Sequence

Transcript ID

Zm00001d005484_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:175599159:175605230:-1 gene:Zm00001d005484 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phospholipase D12 description: phospholipase D12
Sequence

CGCCTGCGCCGCTCGTTGCCCTGTGCACTCCGCGGGCCTCGGGAATGGCCAACCAGGACA
TTTATCGGTATGTTGTTCAACTAGTACTGCTAGATGCATTAGCAGGTTTCTTTTGTATTT
GGATAACCTATAAAGGTCTCAGCACCCAGTATGATTTGGTTGGCAAAGGATGTTTTCTCC
AGAATAATGAAAGTTTAGCTTCTGGTTCATTTTATTGTCTGGTCGATCTTTTTTATACTG
TGATAAAATGGGGAAGCACTCAGCTGAATCTGGGGTTAGTATGTTGTTGCATGGAGACTT
GGACATACAAATAATTGAAGCAAAATGTCTCCCCAATATGGATCTCATGACAGAAAGGAT
GCGAAAATGCTTTACTGGGTATGGAGCTTGCAGCAATGATTGTGGGAAGTCGGAACCACC
ACACCCGGACATGAGAAAGATCATCACTAGTGATCCATACGTTTCAGTTTGTCTGTCAGG
AGCAACGGTGGCACAAACTCGAGTCATTGCCAACTCGGAGAACCCTAAATGGGATGAACA
CTTCTATGTTCAAGTTGCTCATTCAGTTAGCAGAGTCGAGTTTCATGTAAAGGACAACGA
TGTTTTTGGGGCAGAGCTTATCGGCGTGGCTTCAATACCAGTTGAGCACATCATGCCAGG
TGATTTGGTCGGTGGCTGGTTTCCCATTTCTGGTCAGTACAGTAATCCTATGAAGCCATC
TCCTGAGCTGCATTTGTCTATCCAGTATAAGCCAATCGACACAAACCCACTATACAAGGA
TGGAGTTGGTGCTGATGGCCATCAGAGTGTTGGTGTCCCAAATGCATATTTCCCTCTTAG
GAAGGGTGGTAAGGTCACACTATATCAAGATGCTCATGTTCCTGACAATTTTCAACCTCA
TATTGAGATGGATGATGGGAGGACATATGAACAAAACAAATGCTGGGAAGATATTTGTCA
TGCAATCATTGAGGCTCATCACCTTATCTACATAGTCGGCTGGTCCTTGTATCACCCTGT
GAAGCTTGTAAGGGAATCAACAAAACCTGTTCCCAATGGAAACCCAGTCACTATTGGGGA
AATTTTGAAACGCAAAGTTCAAGAAGGAGTCCGTGTTATAGTGTTGCTTTGGGATGATAA
AACATCACATGACAAATTTCTCTTAAAAACAGATGGTCTCATGCATACACATGATGAGGA
AGCTCGAAAATATTTCAGACATTCAGGTGTCCATTGTGTGTTGTCTCCTCGCTATGCCAG
CAACAAACTTAGCATTTTCAAGCAGCAGGTTGTAGGAACTTTGTTTACACACCATCAGAA
ATGTGTCATTGTAGACACCCAAGCCACAGGAAACAATCGAAAAATAACTGCTTTTATTGG
TGGTCTAGACTTGTGTGATGGCAGATATGATACACCTGAACACAGGCTTTTCAAGGATTT
AGATACTATTTTCAAGGACGATTTCCACAACCCGACATTCCCTGTTAATAAGAATGGACC
CAGACAGCCATGGCATGATTTACATTGTAAAATTGAGGGTCCTGCTGCATATGATATACT
TACAAACTTTGAACAGAGATGGAGAAAATCTGCAAAGTGGAAAGTTAGCGTCAGAAGAGC
TGTGAGTTGGCATCATGATACATTGGTAAAAATTGATCGGATGTCATGGATTGTTTCCCC
CTCTTCAGATGAATTAAATGCACATGTTTGTGAAGAAAAGGACCCTGAAAACTGGCATGT
ACAGGTTTTCCGATCGATTGATTCAGGATCTGTAAAAGGATTCCCAAAACTTGTTCAAGA
GGCTGAATCCCAGAATCTTGTCTGTGCAAAGAATCTGCAGATAGACAAAAGCATACACAA
TGCATATGTTAAAGCGATCAGATCTGCACAGCACTTCGTCTATATTGAAAATCAGTACTT
TATTGGGTCTTCATACTACTGGTCTGCACACCGAAGTGCAGGTGCTGAGAACTTAATACC
AATTGAATTGGCCATAAAGATTGCAAGAAAGATTAAGGCAAAGGAAAGGTTTGCAGCATA
CATTGTTATACCGATGTGGCCTGAAGGGAATCCGACAACTGCCGCTATGCAGGAAATCCT
CTATTGGCAGGGGCATACCATGTCCATGATGTACAAGATTGTCGCAGATGCTCTACGAAA
GGAGGGTTTACATGAAAGGCATCCACAGGAGTACCTGAACTTCTATTGCCTTGGCAAACG
TGAAGTCTCGAATGAAGTTCCGACGACAGGCAATTCTAATGAGAACTCTGCAGTGCGTTT
GTCCCAGAAATTCAAGAGGTTCATGATCTATGTGCACTCAAAAGGGATGATTGTGGACGA
CGAGTATGTTCTCATCGGATCGGCCAACATAAACCAGAGATCCATGGACGGCTCACGGGA
CACGGAGATCGCCATGGGTGCATACCAGCCTCACTACAGCTGGGCTGGAAGCGGCAGGCC
TCCCAGAGGACAGGTGTATGGGTACAGGATGTCTCTTTGGGCGGAGCACCTGGGCACAGT
GCAGGAGTGTTTCCGCCGGCCAGAGTCCGAGGAGTGCGTGCAGCAGGTGAACCAGATGGC
AGATGACAACTGGGCGAGCTATGTCTCGCCGCAGATGGCGGATATGAAGGGCCACCTCAT
GAAGTACCCCGTGAGGGTCGAGCAGGATGGGAGGGTGGGGCCGCTGCATGGGCAGGAGAG
CTTCCCAGACGTCGGTGGCAAGGTGCTGGGGACGCACTCGTCGCTCCCCAATGCGTTGAC
GACGTGAGTACTGAGTTGGATGTAGCTCGAAGAAGCTCGAAGGTGGCAGGCTGGTAAATG
GTGAGCTGAAGCTCTGCTCGTCAGAATCACTGGACGTGGTGCAACAAGGGGTTGATACAT
TGGAAAGTTGCTGATCCGATTTCTAGCTTTAAGGCTGTTTGTATGTATATTTATATTGAA
AAAGCGAAAGATGTGATATCCAAGATGAATGGAGACTAATGAGAAAATGTTTGCT