Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005481_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:175588378:175590288:-1 gene:Zm00001d005481 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGAGCAGGAGCTGCTGCAGATCCTGCGGGGCCTGAAATCGCCACGCCACCTGCTGCAG ACCCACGCCCAGCTCCTCGCCCGCGGCCTCTCCGCGAGCCCGCGCCTACTCCCGGTCCTC GTCTCCGCCGCGTTCTCCGTCTCCCCCTCGTCCCCGCGCCAGGCCGCCGCCGCGGCGATC CTTGGCGCTGCCGGCTCCGGCGCCTCCACCGTAGCGCACAACACCCTCATCGAGCGCCTC GCAGGGATCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGTTGCTCCGCGGCGGACGCGTTG GCGGCCTACGCTGCGATGCGTGCCGCAGGGGTGTACCCCAACGGGTTCACCTTCACCTTC CTGCTTCGCGCGTGCGAATCCTTGAGGCGGCTGTTCCTGTGCCGGTGCGTCCATGGACAG ATCGTGAGGTGTGGGTTCGGGTCCGATGTGGTCGTGCAGAACGCTCTCCTGAACGTGTAC TACAAGTGCAGCGACCCGGGTGATGTTGGAATCGCTCGCCAGGTGTTCGATGAAATGGCT AATAGAGACGTGGTTTCGTGGAACTCCATAGTTGGTGTGTACATGTCGAATGGAGACGCA GCAGGGGCCATGGAGTTGTTCGAGGCGATGCCAGAGAGGAATGTTGTCTCCTGGAACACT ATTGTCGCTGCATTCACGAGGGCGGGGGACATGGTGTCAGCACGTGCTGTGTTTGATAGG ATGCCGATCAGAGATGCCATCTCTTGGAATCTCATGATCTCAGGGTATGCAACAAGTGGC AATGTTGAATCTGCATGGTCACTTTTTGATATTATGGATCGGAAGGATGTAGTTTCCTGG ACTGCTATGGTCTCTGCTTATGCAAAGATTGGGGAACTAGATTCAGCTAGAGTGCTATTT GATCAGATGCCTGATAAGAATTTGGTTTCGTGGAATGCAATGATTACAGGGTACAACCAC AACTTGAGGTATGATGATGCACTGTGCACATTTCAGCAGATGATGCTTGAGGGAAGATTC ATGCCTGATGAAGCAACATTAGTAAGTGTTGTCTCAGCCTGCGCTCAGCTAGGCAGTGTT GAATACTGCAACTGGATCAGTTCTTACATTAGTAAAAGCAACACTCATATAACCGTTGCA TTAGGAAATGCACTCGTAGATATGTTTGCAAAATGTGGAGATGTAGGAAGAGCACATTTA GTTTTTAATAAAATGAAAACAAGATGTACCATTACATGGACAACAATGATATCTGGTTTT GCTTATAATGGACAGTTTAGAGAAGCCCTATTGGTCTACAATGATATGTGCAGAGAAGGA GTCACACTGGATGATACAGTCTTTGTTGCTGCACTTGGTGCTTGTGCTCATGGAGGTTTG TTGCAAGAAGGTTGGAGCATCTTTAATCAAATGGTTGAGTACTGTCGCATTGTTCCAAGA ATGGAGCACTATGGATGCATAGTGGACCTACTTGGTCGAGCTGGTAAGTTACAAGAGGCA GTTCGATTTATTGAAAGCATGCCTCTTAAGCCTGGGGTTGTCATTTGGGTAACTTTGCTT AGTTCTTGCATTACGCATGGTGATGCAGAGTTGTCAGAGTATGTCAGCACAAAGATAGTT GAAATGGAACCTTTTAATTCTAGTTATCAAGTGTTGGTTTCAAATTGTAGTGCCCTAGAG GGAAGGTGGGACAGTGTGATGGATGCTCGCAGAACAATGCGTGATTGCGGAGTTGAGAAA ACACCTGGTAGTAGCTTGATTCAGGTAGGAAATGAGGTACATGAGTTTTTGGCTAAAGAC ACAAGGCACAAGAAAAGGAAAGAGGTATATAAAACTTTGGATGGTTTAATAGCCCTCATC AGACATACAGATCACACCCCCTTGGATAAGTTATTGCAGCCACTTGAATAA

Peptide Sequence

PEP ID	Zm00001d005481_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:175588378:175590288:-1 gene:Zm00001d005481 transcript:Zm00001d005481_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MEQELLQILRGLKSPRHLLQTHAQLLARGLSASPRLLPVLVSAAFSVSPSSPRQAAAAAI LGAAGSGASTVAHNTLIERLAGIGGGGGGGGRGCSAADALAAYAAMRAAGVYPNGFTFTF LLRACESLRRLFLCRCVHGQIVRCGFGSDVVVQNALLNVYYKCSDPGDVGIARQVFDEMA NRDVVSWNSIVGVYMSNGDAAGAMELFEAMPERNVVSWNTIVAAFTRAGDMVSARAVFDR MPIRDAISWNLMISGYATSGNVESAWSLFDIMDRKDVVSWTAMVSAYAKIGELDSARVLF DQMPDKNLVSWNAMITGYNHNLRYDDALCTFQQMMLEGRFMPDEATLVSVVSACAQLGSV EYCNWISSYISKSNTHITVALGNALVDMFAKCGDVGRAHLVFNKMKTRCTITWTTMISGF AYNGQFREALLVYNDMCREGVTLDDTVFVAALGACAHGGLLQEGWSIFNQMVEYCRIVPR MEHYGCIVDLLGRAGKLQEAVRFIESMPLKPGVVIWVTLLSSCITHGDAELSEYVSTKIV EMEPFNSSYQVLVSNCSALEGRWDSVMDARRTMRDCGVEKTPGSSLIQVGNEVHEFLAKD TRHKKRKEVYKTLDGLIALIRHTDHTPLDKLLQPLE

Transcript Sequence

Transcript ID	Zm00001d005481_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:175588378:175590288:-1 gene:Zm00001d005481 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGAGCAGGAGCTGCTGCAGATCCTGCGGGGCCTGAAATCGCCACGCCACCTGCTGCAG ACCCACGCCCAGCTCCTCGCCCGCGGCCTCTCCGCGAGCCCGCGCCTACTCCCGGTCCTC GTCTCCGCCGCGTTCTCCGTCTCCCCCTCGTCCCCGCGCCAGGCCGCCGCCGCGGCGATC CTTGGCGCTGCCGGCTCCGGCGCCTCCACCGTAGCGCACAACACCCTCATCGAGCGCCTC GCAGGGATCGGCGGCGGCGGCGGCGGCGGCGGTCGTGGTTGCTCCGCGGCGGACGCGTTG GCGGCCTACGCTGCGATGCGTGCCGCAGGGGTGTACCCCAACGGGTTCACCTTCACCTTC CTGCTTCGCGCGTGCGAATCCTTGAGGCGGCTGTTCCTGTGCCGGTGCGTCCATGGACAG ATCGTGAGGTGTGGGTTCGGGTCCGATGTGGTCGTGCAGAACGCTCTCCTGAACGTGTAC TACAAGTGCAGCGACCCGGGTGATGTTGGAATCGCTCGCCAGGTGTTCGATGAAATGGCT AATAGAGACGTGGTTTCGTGGAACTCCATAGTTGGTGTGTACATGTCGAATGGAGACGCA GCAGGGGCCATGGAGTTGTTCGAGGCGATGCCAGAGAGGAATGTTGTCTCCTGGAACACT ATTGTCGCTGCATTCACGAGGGCGGGGGACATGGTGTCAGCACGTGCTGTGTTTGATAGG ATGCCGATCAGAGATGCCATCTCTTGGAATCTCATGATCTCAGGGTATGCAACAAGTGGC AATGTTGAATCTGCATGGTCACTTTTTGATATTATGGATCGGAAGGATGTAGTTTCCTGG ACTGCTATGGTCTCTGCTTATGCAAAGATTGGGGAACTAGATTCAGCTAGAGTGCTATTT GATCAGATGCCTGATAAGAATTTGGTTTCGTGGAATGCAATGATTACAGGGTACAACCAC AACTTGAGGTATGATGATGCACTGTGCACATTTCAGCAGATGATGCTTGAGGGAAGATTC ATGCCTGATGAAGCAACATTAGTAAGTGTTGTCTCAGCCTGCGCTCAGCTAGGCAGTGTT GAATACTGCAACTGGATCAGTTCTTACATTAGTAAAAGCAACACTCATATAACCGTTGCA TTAGGAAATGCACTCGTAGATATGTTTGCAAAATGTGGAGATGTAGGAAGAGCACATTTA GTTTTTAATAAAATGAAAACAAGATGTACCATTACATGGACAACAATGATATCTGGTTTT GCTTATAATGGACAGTTTAGAGAAGCCCTATTGGTCTACAATGATATGTGCAGAGAAGGA GTCACACTGGATGATACAGTCTTTGTTGCTGCACTTGGTGCTTGTGCTCATGGAGGTTTG TTGCAAGAAGGTTGGAGCATCTTTAATCAAATGGTTGAGTACTGTCGCATTGTTCCAAGA ATGGAGCACTATGGATGCATAGTGGACCTACTTGGTCGAGCTGGTAAGTTACAAGAGGCA GTTCGATTTATTGAAAGCATGCCTCTTAAGCCTGGGGTTGTCATTTGGGTAACTTTGCTT AGTTCTTGCATTACGCATGGTGATGCAGAGTTGTCAGAGTATGTCAGCACAAAGATAGTT GAAATGGAACCTTTTAATTCTAGTTATCAAGTGTTGGTTTCAAATTGTAGTGCCCTAGAG GGAAGGTGGGACAGTGTGATGGATGCTCGCAGAACAATGCGTGATTGCGGAGTTGAGAAA ACACCTGGTAGTAGCTTGATTCAGGTAGGAAATGAGGTACATGAGTTTTTGGCTAAAGAC ACAAGGCACAAGAAAAGGAAAGAGGTATATAAAACTTTGGATGGTTTAATAGCCCTCATC AGACATACAGATCACACCCCCTTGGATAAGTTATTGCAGCCACTTGAATAA