Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005472_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:175349736:175351455:1 gene:Zm00001d005472 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

ATGGCCAAGCTCCAAGTCACTCCTGGCGCCGCGTTCACCGAGTGCAATGAACTCAACTTC
CAGGGCCTGTACATGTACCACACGCCCCTGGGTCCCAAGGCCAACCAAGCTGCGATCCTA
GAGAGCAAGGCCAAGATCGGCATCGGTGCCACCGTGGTTAACAACTGGGCAGTGTATGAC
GGGCCAGGGCCAGGCGCCAAGCTCGTCGGCCGTGCGCAGGGCTTGCACATCCTAGCCGGA
AACTGGGTCAACTCATTCACCCTGGTGTTCGAGGATGAAAGGTTCAGTGGGTCCACGCTT
GAAGTGAGGGGCATAACGGTTGAAACTGGCGAGTGGGCTGTTGTTGGGGGCACCGGCCAG
TTTGCTATGGCGAACGGCATCATCTCCAAGAAGTTACACGAGCAGAGAAGCGACGGGAAC
GTCATAGAGCTTAGTGTCCATGCTTTCTGCCCGCTGCTCAAAGGGAAAAGGGGCGGTGCT
GTGACAAAGGTTGGGCCATGGGGCGGAAGCGGAGGGTCTCCAATGGAGCTGACAGAGACG
GAGACGCCCATGCGTCTGGAGAGCATCACCGTCAGCAGCGGCGTGGCCGTCAACTCCATC
TCATTCTCCTACGTCGACTCTGCCGGCCACAAGCGCTCTGCTGGTCCCTGGGGTGGTTCC
GGTGGACAGCCTGATCAGGTCCAGCTCGCCGAGTCTGAGGTGGTCACACAAGTGTCCGGA
ACATACGGCACCATCGACGACGACGACCGCACCGTGATAACCTCCATTAAGTTCGTCACG
AACCTTGACAAGACCTACGGGCCTTTCGGAGCGTACGGGGACGGCGACGACACCTCCTTC
ACCGTCCCCGTGCAGCCGGGGAGTGGCGCCATCGTGGGCTTCTTCGCCCGCGTTGGCGGG
GCCGGGGACTACCTGGACGCCATTGGCGTCTACGTGCGCCCCCTCTAA

Peptide Sequence

PEP ID

Zm00001d005472_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:175349736:175351455:1 gene:Zm00001d005472 transcript:Zm00001d005472_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

MAKLQVTPGAAFTECNELNFQGLYMYHTPLGPKANQAAILESKAKIGIGATVVNNWAVYD
GPGPGAKLVGRAQGLHILAGNWVNSFTLVFEDERFSGSTLEVRGITVETGEWAVVGGTGQ
FAMANGIISKKLHEQRSDGNVIELSVHAFCPLLKGKRGGAVTKVGPWGGSGGSPMELTET
ETPMRLESITVSSGVAVNSISFSYVDSAGHKRSAGPWGGSGGQPDQVQLAESEVVTQVSG
TYGTIDDDDRTVITSIKFVTNLDKTYGPFGAYGDGDDTSFTVPVQPGSGAIVGFFARVGG
AGDYLDAIGVYVRPL

Transcript Sequence

Transcript ID

Zm00001d005472_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:175349736:175351455:1 gene:Zm00001d005472 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

GGGACACAGCACAAGAACACTCCTAGCTGAAGATCTCGAGTGCAACGCAACGTTGGCGCT
TGGCGGCCAGTAGTAGCAGCAAACTTAGCGTCGCTCCTTCCTACTAGACGAGAGATCGAG
AAACCATGGCCAAGCTCCAAGTCACTCCTGGCGCCGCGTTCACCGAGTGCAATGAACTCA
ACTTCCAGGGCCTGTACATGTACCACACGCCCCTGGGTCCCAAGGCCAACCAAGCTGCGA
TCCTAGAGAGCAAGGCCAAGATCGGCATCGGTGCCACCGTGGTTAACAACTGGGCAGTGT
ATGACGGGCCAGGGCCAGGCGCCAAGCTCGTCGGCCGTGCGCAGGGCTTGCACATCCTAG
CCGGAAACTGGGTCAACTCATTCACCCTGGTGTTCGAGGATGAAAGGTTCAGTGGGTCCA
CGCTTGAAGTGAGGGGCATAACGGTTGAAACTGGCGAGTGGGCTGTTGTTGGGGGCACCG
GCCAGTTTGCTATGGCGAACGGCATCATCTCCAAGAAGTTACACGAGCAGAGAAGCGACG
GGAACGTCATAGAGCTTAGTGTCCATGCTTTCTGCCCGCTGCTCAAAGGGAAAAGGGGCG
GTGCTGTGACAAAGGTTGGGCCATGGGGCGGAAGCGGAGGGTCTCCAATGGAGCTGACAG
AGACGGAGACGCCCATGCGTCTGGAGAGCATCACCGTCAGCAGCGGCGTGGCCGTCAACT
CCATCTCATTCTCCTACGTCGACTCTGCCGGCCACAAGCGCTCTGCTGGTCCCTGGGGTG
GTTCCGGTGGACAGCCTGATCAGGTCCAGCTCGCCGAGTCTGAGGTGGTCACACAAGTGT
CCGGAACATACGGCACCATCGACGACGACGACCGCACCGTGATAACCTCCATTAAGTTCG
TCACGAACCTTGACAAGACCTACGGGCCTTTCGGAGCGTACGGGGACGGCGACGACACCT
CCTTCACCGTCCCCGTGCAGCCGGGGAGTGGCGCCATCGTGGGCTTCTTCGCCCGCGTTG
GCGGGGCCGGGGACTACCTGGACGCCATTGGCGTCTACGTGCGCCCCCTCTAAAAAAGCT
TTGTTTCTGATGTGAATCAAGCAGCTGCATGCATGCTGCTCTACTCCACACAGAGTCCAT
CACCACCTGCTGCTTGAAATGCGTGCGTGCGTGCGGCTTCCAGTTGCTTTATTTCGTACC
TGAGTGTTGTGTTGTGGTGTGTTTGCTCATGTACTTCGGTACGTTAATTGCTTGGTAAAC
TCTGGTCAGTGATGTGTGTTTGCCTTTGTCATGGATTTCGACGGAATAATAAAGACCTCG
AGTAGAAGAGGTCAGGGTTTTTTC