Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005453_T047
CDS Infomation

cds chromosome:B73_RefGen_v4:2:174636272:174662986:-1 gene:Zm00001d005453 gene_biotype:protein_coding transcript_biotype:protein_coding description:heteroglycan glucosidase 1
Sequence

ATGACATCTTTGTCGCATGCAATTGGTACTGTGTCCATGCCGCCAAAATGGTCACTTGGC
TATCATCAATGTCGTTGGAGCTATGATTCTTCTGAGAAAGTACTCAAGGTTGTTAGGACA
TTTAGGGAGAAAGACATTCCTTGTGATGTTGTCTGGATGGATATTGACTATATGGATGGT
TTTAGGTGCTTCACGTTTGATAGTATCCGATTCCCTGATCCAATATCAATGGTAGATGAT
CTCCATTCCATTGGTTGCAAAGCAATCTGGATGCTTGACCCAGGGATCAAGAAGGAGGAG
GGTTACTTTGTTTATGATAGTGGCTCAAAAAGCGATGTTTGGATTCAAAAGGCAGATGGC
AGTCCATTCGTTGGGGAGGTGTGGCCTGGTGATTGTGTTTTCCCTGACTATACATCTGAA
AAAACACGAGCTTGGTGGGCTAGTTTGGTAAAGGACTTCATCTCTATTGGTGTTGATGGA
ATATGGAATGATATGAATGAACCTGCTGTTTTCAAAACTACCACGAAGACAATGCCTGAA
AGCAATATTCATAGGGGAGATGCTGATATTGGTGGTGTTCAAAATCATTCATACTATCAC
AATGTCTACGGAATGCTAATGGCAAGATCTACTTATAAAGGAATGGAAATGGGCAATGCA
GCTAAACGACCATTTGTTCTTACACGAGCTGGTTTTATTGGAAGTCAGCGTTATGCTGCA
ACATGGACTGGTGATAATCTTTCAAATTGGGAGCATCTGCACATGAGTCTACCAATGGTT
CTTCAGTTGGGTCTCAGTGGTCAACCATTGTCAGGTCCTGATATTGGTGGTTTTGCTGGA
AATGCTACTCCAAAACTTTTTGGAAGATGGATGGGTGTGGGTGCATTGTTTCCATTTTCA
CGTGGCCATACAGAAACTGGAAGCATTGACCACGAACCATGGTCCTTTGGTAAAGAGTGT
GAGGAAGTCTGTCGCCTTGCGCTACTAAGACGGTACCGGCTACTGCCACATATCTACACT
CTTTTTTACCACTCACATACAAAGGGTATTCCAGTTGCTACTCCAGTTTTCTTTGCTGAT
ACACAAGACCCTGAACTGAGGAAAGTTGAGACTTCCTTTCTCCTTGGACCACTCTTAGTT
TGTGCAAGCACTTTACCTAATAAAGGAGCTCATGAATATGCACATAAGTTACCGAAGGGC
ATATGGTTGTCTTTTGATTTTGCGGATTCACACCCTGATCTGCCGGTGCTGTATCTACAA
GGTGGAGCAATTCTTCCTGTAGGTCTTCCTATTAAGCATGTTAGTGAAGCAAGTTTGGAG
GATGACCTGTCACTAATTATCGCATTGAATGAAAATGGTAAAGCTGAAGGTGTTCTCTTT
GAAGATGCAGGAGATGGATATGCATTCACACAGGGAGACTATCTTTTGACATATTATATT
GCTGAACTCCACTCATCAGTGGTTACTGTCAAAATCTTAAAATCTGAAGGGTCATGGAAG
AGACCAAAACGAAATCTGAAAATAAATATATTGCTTGGTGGAGGTGCTATGATAAGTACA
GATGGTGTTGATGGTGAAGTAATACACCTTACAATGCCTTCTGAATCTGTAGTGTCAAGC
TTAGTTGCAACCAGCGAATTTGAGCACAAGAAACGAATGGAGATGATTCAGCCTATACCT
GATATAGAAGAGCCATCGGGGCAGGAAGGTGCTGAGCTATCAAAAATACCTGTTGATTTG
AAAAGTGGAGACTGGTTCCTTAAGATTGTACCATGGATTGGAGGCCGTATTATATCGATG
GCCCATATTCCTTCTGATTCCCAGTGGCTTCACAGCAGAATTGAGATAAATGGTTATGAA
GAATACAGTGGGGCTGAATATAGGTCTGCTGGTTGCACAGAAGAGTACAAAGTCATCAGG
AGGCACCTTGAACAATCTGGAGAGGAGGAATCTATTTGTATGGAAGGAGACATTGGTGGT
GGTCTGGTTCTCCAGCGCCAGATATCCATTTTGAAGGACAACCCAAAGATTGTTCAGATC
GACTCCAGCATTCAGGCAAGAAGTGTAGGAGCTGGTTCTGGTGGGTTTTCAAGGTTGGTC
TGTTTACGAGTTCATCCTACATTCACCCTGCTGCACCCAACTGAGGTAGTAGTTGCTTTC
ACGGCCATCAATGGTTCAAAGCAAGAGATCTCCCCGGAGGCAGGAGAAATAACATTCGAG
GGAGACCTCAAACCCAACGGAGAATGGATGCTAGTGGACAAGTGTGTCGGGCTGAGCTTG
GTGAACCGGTTTAATCCCAGGGAGGTTAGCAAATGCTTTGTGCACTGGGGAACTGGTGAT
GTGAACATGGAGCTCTGGTCAGAGGAAAGACCGGTGTCTAATGAGACGCCGTTGAGGATT
TGCCACCAGTATGAGGTGCAGCAAACAACCTAA

Peptide Sequence

PEP ID

Zm00001d005453_P047
PEP Infomation

pep chromosome:B73_RefGen_v4:2:174636272:174662986:-1 gene:Zm00001d005453 transcript:Zm00001d005453_T047 gene_biotype:protein_coding transcript_biotype:protein_coding description:heteroglycan glucosidase 1
Sequence

MTSLSHAIGTVSMPPKWSLGYHQCRWSYDSSEKVLKVVRTFREKDIPCDVVWMDIDYMDG
FRCFTFDSIRFPDPISMVDDLHSIGCKAIWMLDPGIKKEEGYFVYDSGSKSDVWIQKADG
SPFVGEVWPGDCVFPDYTSEKTRAWWASLVKDFISIGVDGIWNDMNEPAVFKTTTKTMPE
SNIHRGDADIGGVQNHSYYHNVYGMLMARSTYKGMEMGNAAKRPFVLTRAGFIGSQRYAA
TWTGDNLSNWEHLHMSLPMVLQLGLSGQPLSGPDIGGFAGNATPKLFGRWMGVGALFPFS
RGHTETGSIDHEPWSFGKECEEVCRLALLRRYRLLPHIYTLFYHSHTKGIPVATPVFFAD
TQDPELRKVETSFLLGPLLVCASTLPNKGAHEYAHKLPKGIWLSFDFADSHPDLPVLYLQ
GGAILPVGLPIKHVSEASLEDDLSLIIALNENGKAEGVLFEDAGDGYAFTQGDYLLTYYI
AELHSSVVTVKILKSEGSWKRPKRNLKINILLGGGAMISTDGVDGEVIHLTMPSESVVSS
LVATSEFEHKKRMEMIQPIPDIEEPSGQEGAELSKIPVDLKSGDWFLKIVPWIGGRIISM
AHIPSDSQWLHSRIEINGYEEYSGAEYRSAGCTEEYKVIRRHLEQSGEEESICMEGDIGG
GLVLQRQISILKDNPKIVQIDSSIQARSVGAGSGGFSRLVCLRVHPTFTLLHPTEVVVAF
TAINGSKQEISPEAGEITFEGDLKPNGEWMLVDKCVGLSLVNRFNPREVSKCFVHWGTGD
VNMELWSEERPVSNETPLRICHQYEVQQTT

Transcript Sequence

Transcript ID

Zm00001d005453_T047
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:174636272:174662986:-1 gene:Zm00001d005453 gene_biotype:protein_coding transcript_biotype:protein_coding description:heteroglycan glucosidase 1
Sequence

GGGTTTTGGCTGTCCTCCCTGATGGAAAAGCATTGGGTGTCCTTGCTGATACCACTCGGC
GTTGTGAGATTGATTTGCGACAAGAATCAACTATAAAGTTCTCTGCCTTATCTGCCTACC
CTGTCATCACTTTTGGGCCATTTAATACTCCAGCTGATGTCATGACATCTTTGTCGCATG
CAATTGGTACTGTGTCCATGCCGCCAAAATGGTCACTTGGCTATCATCAATGTCGTTGGA
GCTATGATTCTTCTGAGAAAGTACTCAAGGTTGTTAGGACATTTAGGGAGAAAGACATTC
CTTGTGATGTTGTCTGGATGGATATTGACTATATGGATGGTTTTAGGTGCTTCACGTTTG
ATAGTATCCGATTCCCTGATCCAATATCAATGGTAGATGATCTCCATTCCATTGGTTGCA
AAGCAATCTGGATGCTTGACCCAGGGATCAAGAAGGAGGAGGGTTACTTTGTTTATGATA
GTGGCTCAAAAAGCGATGTTTGGATTCAAAAGGCAGATGGCAGTCCATTCGTTGGGGAGG
TGTGGCCTGGTGATTGTGTTTTCCCTGACTATACATCTGAAAAAACACGAGCTTGGTGGG
CTAGTTTGGTAAAGGACTTCATCTCTATTGGTGTTGATGGAATATGGAATGATATGAATG
AACCTGCTGTTTTCAAAACTACCACGAAGACAATGCCTGAAAGCAATATTCATAGGGGAG
ATGCTGATATTGGTGGTGTTCAAAATCATTCATACTATCACAATGTCTACGGAATGCTAA
TGGCAAGATCTACTTATAAAGGAATGGAAATGGGCAATGCAGCTAAACGACCATTTGTTC
TTACACGAGCTGGTTTTATTGGAAGTCAGCGTTATGCTGCAACATGGACTGGTGATAATC
TTTCAAATTGGGAGCATCTGCACATGAGTCTACCAATGGTTCTTCAGTTGGGTCTCAGTG
GTCAACCATTGTCAGGTCCTGATATTGGTGGTTTTGCTGGAAATGCTACTCCAAAACTTT
TTGGAAGATGGATGGGTGTGGGTGCATTGTTTCCATTTTCACGTGGCCATACAGAAACTG
GAAGCATTGACCACGAACCATGGTCCTTTGGTAAAGAGTGTGAGGAAGTCTGTCGCCTTG
CGCTACTAAGACGGTACCGGCTACTGCCACATATCTACACTCTTTTTTACCACTCACATA
CAAAGGGTATTCCAGTTGCTACTCCAGTTTTCTTTGCTGATACACAAGACCCTGAACTGA
GGAAAGTTGAGACTTCCTTTCTCCTTGGACCACTCTTAGTTTGTGCAAGCACTTTACCTA
ATAAAGGAGCTCATGAATATGCACATAAGTTACCGAAGGGCATATGGTTGTCTTTTGATT
TTGCGGATTCACACCCTGATCTGCCGGTGCTGTATCTACAAGGTGGAGCAATTCTTCCTG
TAGGTCTTCCTATTAAGCATGTTAGTGAAGCAAGTTTGGAGGATGACCTGTCACTAATTA
TCGCATTGAATGAAAATGGTAAAGCTGAAGGTGTTCTCTTTGAAGATGCAGGAGATGGAT
ATGCATTCACACAGGGAGACTATCTTTTGACATATTATATTGCTGAACTCCACTCATCAG
TGGTTACTGTCAAAATCTTAAAATCTGAAGGGTCATGGAAGAGACCAAAACGAAATCTGA
AAATAAATATATTGCTTGGTGGAGGTGCTATGATAAGTACAGATGGTGTTGATGGTGAAG
TAATACACCTTACAATGCCTTCTGAATCTGTAGTGTCAAGCTTAGTTGCAACCAGCGAAT
TTGAGCACAAGAAACGAATGGAGATGATTCAGCCTATACCTGATATAGAAGAGCCATCGG
GGCAGGAAGGTGCTGAGCTATCAAAAATACCTGTTGATTTGAAAAGTGGAGACTGGTTCC
TTAAGATTGTACCATGGATTGGAGGCCGTATTATATCGATGGCCCATATTCCTTCTGATT
CCCAGTGGCTTCACAGCAGAATTGAGATAAATGGTTATGAAGAATACAGTGGGGCTGAAT
ATAGGTCTGCTGGTTGCACAGAAGAGTACAAAGTCATCAGGAGGCACCTTGAACAATCTG
GAGAGGAGGAATCTATTTGTATGGAAGGAGACATTGGTGGTGGTCTGGTTCTCCAGCGCC
AGATATCCATTTTGAAGGACAACCCAAAGATTGTTCAGATCGACTCCAGCATTCAGGCAA
GAAGTGTAGGAGCTGGTTCTGGTGGGTTTTCAAGGTTGGTCTGTTTACGAGTTCATCCTA
CATTCACCCTGCTGCACCCAACTGAGGTAGTAGTTGCTTTCACGGCCATCAATGGTTCAA
AGCAAGAGATCTCCCCGGAGGCAGGAGAAATAACATTCGAGGGAGACCTCAAACCCAACG
GAGAATGGATGCTAGTGGACAAGTGTGTCGGGCTGAGCTTGGTGAACCGGTTTAATCCCA
GGGAGGTTAGCAAATGCTTTGTGCACTGGGGAACTGGTGATGTGAACATGGAGCTCTGGT
CAGAGGAAAGACCGGTGTCTAATGAGACGCCGTTGAGGATTTGCCACCAGTATGAGGTGC
AGCAAACAACCTAAACACCTGCCCGAAGAGCAGAAATAAAAATACCAATTTGGAGGATAC
TTCAGTTGCTTGCACTTGTTTTACGGTCTCTGTATTGACGGTCGCGCACCATAACTTCCA
TGGTATTTTGGAGTCGTGTCGTTAGTCATTACCCTCTTGGAGGACTTTGGGTCTGCTGAA
AACATGGTTACTCAGCAATATCTGCTACTGTTCACGACTGACATTCAAAGGGTTACTCAG
CAATAT