Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005393_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:2:172153504:172161445:-1 gene:Zm00001d005393 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase
Sequence	ATGGCATCGACCTCTCCGCACCGCTCCTCCGGCGGGGATCCACCTTCCTCGTCCACGCCC CTCATCTCCTCGCCGACCTCCCCGGCATCCGGCTCCCCCGGCGGCCCGCTAGGGCGGCTC ACGAGCCTCCGCGGCGCAGCGCGGTTCATCCGGCGCACGGGGAGCCGGAGTTTGATGAGG GAGCCCTCCGTGGCGGTGCGGGAGACGGCCGCCGAGCACCTAGAGGAGCGTCAGACCGAC TGGGCCTACTCTAAGCCTGTCGTCGTGGTCGACATGCTCTGGAACGTCGCCTTCGTCGCA ATCGCCGCGGCCGTCCTCGCCGCGTCGCTGGGCGAGAGTCCCGCTGTGCCTCTCCGCGTC TGGATCGCGGGCTACGTGCTCCAGTGCCTCCTCCACATCCTCTGCGTCACAGTCGAATAC AGGCGTCGACGCAGGACCCAGGAGGGAGCGGGTGTTGAGGACTTCAAGTTCAGGTCTATT ACTATTCGACAACTTGTGATGTCCTTTGCTTAA

Peptide Sequence

PEP ID	Zm00001d005393_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:2:172153504:172161445:-1 gene:Zm00001d005393 transcript:Zm00001d005393_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase
Sequence	MASTSPHRSSGGDPPSSSTPLISSPTSPASGSPGGPLGRLTSLRGAARFIRRTGSRSLMR EPSVAVRETAAEHLEERQTDWAYSKPVVVVDMLWNVAFVAIAAAVLAASLGESPAVPLRV WIAGYVLQCLLHILCVTVEYRRRRRTQEGAGVEDFKFRSITIRQLVMSFA

Transcript Sequence

Transcript ID	Zm00001d005393_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:172153504:172161445:-1 gene:Zm00001d005393 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase
Sequence	AGGGTCTGGCTGACTGGCTCCCACCATGGCATCGACCTCTCCGCACCGCTCCTCCGGCGG GGATCCACCTTCCTCGTCCACGCCCCTCATCTCCTCGCCGACCTCCCCGGCATCCGGCTC CCCCGGCGGCCCGCTAGGGCGGCTCACGAGCCTCCGCGGCGCAGCGCGGTTCATCCGGCG CACGGGGAGCCGGAGTTTGATGAGGGAGCCCTCCGTGGCGGTGCGGGAGACGGCCGCCGA GCACCTAGAGGAGCGTCAGACCGACTGGGCCTACTCTAAGCCTGTCGTCGTGGTCGACAT GCTCTGGAACGTCGCCTTCGTCGCAATCGCCGCGGCCGTCCTCGCCGCGTCGCTGGGCGA GAGTCCCGCTGTGCCTCTCCGCGTCTGGATCGCGGGCTACGTGCTCCAGTGCCTCCTCCA CATCCTCTGCGTCACAGTCGAATACAGGCGTCGACGCAGGACCCAGGAGGGAGCGGGTGT TGAGGACTTCAAGTTCAGGTCTATTACTATTCGACAACTTGTGATGTCCTTTGCTTAAAA AATGTGCATATGGGGATGGTGGAAGTTTGATTGTAAGTGTAATTTTGTTGTTTCGGTTAC AGGTGCATTCTTATGGAAAATTTTTTAGAGCAATTAAAAATAGCATGTGCGTCTTCATAC ATTGTAGACTTGCAGTCAAATTGGGAAATTGTTTAGGGTGTGCTTGAGGGGATTACTCTG AGTCTCTGACAAATCTTTTATATTTTGGATCTGAATTCCAACTACCTAAACAGGACCTTA TTCTCCCAATCCCATAACCGTCGATAACTAATTTCGACAGATTTATATTAGTATTTGTAG CCAACTGTATGATGACAAAGATGCTTTTATTGAATGTGTCCCCTATAATATGGATCCATA TCTTTTATAAAAATGGCCGCATTGAAAATTTTATATTGATTTGATGGACTTGTCTATTAT TAGCTTTTTGGTGTTTTGTACAAAGCCTTCACATGTCTTTCCTTCATTTTACCCGAATCA CACTAGGAAACATTCCAATACTAAATCCTTAAATTTACTTGCTCTTGTATTCACATTTAT TATTTATTTGTTTCTGTTGAGTTTCAACTCTAGTTTACCCATTGGCGGACCTAAGTGCAG GCAAGCCTAGGCTCTTGCCCAGGCTCCTCCATTAGTGCTAATGAACTTGTAAACGTGCAC CAAGCAGTAAAATATAGTTAAACATGTGTAAAAACTAGGCAAAGCTATATGTTTATAGTA TGAGTACTATCTTTGCCTAGGATCTCGAAGATTTCTAGGCCCGCCACTGTTTACCCCAAC TTGTTTGGGACTAAAAGGCCTGTTGTTGTTATTGTTCCATGTTCAGTATTGTGAAGCACT TGGAGTCTGCAAACACGATGTTTTCCTTTATTTGGTGGATCCTTGGGTTCTATTGGGTGT CTGCAGGTGGTCAAGCTTTATCACATGATGCTCCTCAGCTTTATTGGTATGTCTGTTGTA ACTTTGATGTGTGGATAAGGAAAAATCTGAGTGTTTTTTTAAGTTCATCAATGTTGTTCT CTGAAATGACTATCTTCTTTTTACAGGCTGACAATTGTTTTTCTGGCATTTGATGTTTTC TTTGTGGTCTTCTGTATTGCTTTGGCTTGTGTGATTGGAATCGCTGTTTGTTGCTGCCTT CCGTGCATTATTGGTATCTTGTATGCTGTAACTGATCAGGAGGAGGGAGCATCTGAAGAT GACGTAAACAACCTTTCCAAATTCAAATTTCGGACAATGAGTGATGCAGACAAGCTAGCT GCCGGCATTGCAGCACCTGTGGGTGGAGTGATGACAGAGTGCGGTACCAATCCTCCTGTC GAACATATTCTTTCGGCTGAGGATGCAGAGTGCTGTATCTGCCTATGCCCGTACGAAGAT GGCGTGGAACTGCGTGAGCTCCCTTGCAACCACCATTTTCACTGCAGCTGTATAGACAAG TGGCTTCACATAAATGCTACATGCCCATTGTGCAAGTTCAACATCGTCAAGAGCAATCTC CACAGAGAAGAGGTCTAGGTCAATAAGGAAAAAAATAATAATCATGGCAGCACATTTCGG CATGTCCCATCCCAGCTGTGCTCGTCAGTATTGCCACATTTGCCAACTGGAGTTGTGATT ACCTGTCTTGTAGTCAAGTCATAAAAGTCACTGGTGATGCGCAGGTGGTTGCAATGTCGG TTCTCGTGAATATTCCTTGTAACAGTTTGCTGCAGGGGCTGTACATTCTCGTTCTGCTCG ATCTGATTGCATTGCGATTTATTT