Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005391_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:172032915:172034435:-1 gene:Zm00001d005391 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine proteinases superfamily protein
Sequence	ATGGCGTCCTCCTCCAAAGGGTCGCTGCCATGCGTGCTCCTCCTCCTCGCTGTCTTCCAC CACGGCTGCTCGTCGGCGAGGGCCCACAGACGTGCCGGCGACATGGAGAGGAGCATGAGC ACCGACGACAGCTCGATGATAGAGCGGTTCCAGCGGTGGAAGGCGGCGTACAACAAGTCC TACGCCACGGTCGCCGAGGAGCGGCGGCGGTTCCGGGTGTGCGCGCGCAACATGGCGTAC ATCGAGGCCACCAACGCCGAGGCCGAGGCGGCGGGGCTCACGTACGAGCTCGGCGAGACG GCCTACACCGACCTCACCAACCAGGAGTTCATGGCCATGTACACGGCGCCCGCGCCGGCG CAGCTGCCCGCGGACGAGTCGGTGATCACCACGCGCGCGGGGCCGGTTGACGCCGTCGGG GGCGCGCCGGGCCAGCTGCCGGTGTACGTGAACCTGTCCACCTCCGCGCCGGCGAGCGTG GACTGGCGAGCCAGCGGCGCCGTGACGCCGGTGAAGAACCAAGGCCGATGTGGGTCATGC TGGGCCTTCTCGACGGTGGCGGTGGTCGAAGGCATCTACCAGATCCGGACGGGGAAGCTG GTGTCCCTGTCGGAGCAGGAGCTGGTGGACTGCGACACGCTGGACGACGGCTGCGACGGC GGCATCAGCTACCGCGCTCTGCGGTGGATCGCCTCCAACGGCGGCATCACCACGGAGACC GACTACCCGTACACGGGCACCACGGACGCTTGCAACAGGGCCAAGCTCTCCCACAACGCG GTCAGCATCGCCGGGCTCCGGCGCGTTGCCACCCGGAGCGAGGCGTCGCTGGCCAACGCC GTGGCGGGGCAGCCCGTGGCCGTGTCCATCGAGGCCGGCGGCGACAACTTCCAGCACTAC AAGAAGGGAGTGTACAACGGGCCCTGCGGGACCAACCTCAACCACGGCGTCACCGTCGTC GGCTACGGCCAGGAGGCGGCCGGCGGCGACAGGTACTGGATCGTCAAGAACTCGTGGGGG CAGGGGTGGGGCGACGACGGATACATCAGGATGAAGAAAGACGTCGCCGGCAAGCCGGAG GGGCTCTGCGGCATCGCCATCCGCCCGTCCTATCCACTAATGTGA

Peptide Sequence

PEP ID	Zm00001d005391_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:172032915:172034435:-1 gene:Zm00001d005391 transcript:Zm00001d005391_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine proteinases superfamily protein
Sequence	MASSSKGSLPCVLLLLAVFHHGCSSARAHRRAGDMERSMSTDDSSMIERFQRWKAAYNKS YATVAEERRRFRVCARNMAYIEATNAEAEAAGLTYELGETAYTDLTNQEFMAMYTAPAPA QLPADESVITTRAGPVDAVGGAPGQLPVYVNLSTSAPASVDWRASGAVTPVKNQGRCGSC WAFSTVAVVEGIYQIRTGKLVSLSEQELVDCDTLDDGCDGGISYRALRWIASNGGITTET DYPYTGTTDACNRAKLSHNAVSIAGLRRVATRSEASLANAVAGQPVAVSIEAGGDNFQHY KKGVYNGPCGTNLNHGVTVVGYGQEAAGGDRYWIVKNSWGQGWGDDGYIRMKKDVAGKPE GLCGIAIRPSYPLM

Transcript Sequence

Transcript ID	Zm00001d005391_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:172032915:172034435:-1 gene:Zm00001d005391 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine proteinases superfamily protein
Sequence	AAGCGTAGACCTACCACAGGGCTGGGCCAACCAGTCCCGATCGATCAGCCAGCATGGCGT CCTCCTCCAAAGGGTCGCTGCCATGCGTGCTCCTCCTCCTCGCTGTCTTCCACCACGGCT GCTCGTCGGCGAGGGCCCACAGACGTGCCGGCGACATGGAGAGGAGCATGAGCACCGACG ACAGCTCGATGATAGAGCGGTTCCAGCGGTGGAAGGCGGCGTACAACAAGTCCTACGCCA CGGTCGCCGAGGAGCGGCGGCGGTTCCGGGTGTGCGCGCGCAACATGGCGTACATCGAGG CCACCAACGCCGAGGCCGAGGCGGCGGGGCTCACGTACGAGCTCGGCGAGACGGCCTACA CCGACCTCACCAACCAGGAGTTCATGGCCATGTACACGGCGCCCGCGCCGGCGCAGCTGC CCGCGGACGAGTCGGTGATCACCACGCGCGCGGGGCCGGTTGACGCCGTCGGGGGCGCGC CGGGCCAGCTGCCGGTGTACGTGAACCTGTCCACCTCCGCGCCGGCGAGCGTGGACTGGC GAGCCAGCGGCGCCGTGACGCCGGTGAAGAACCAAGGCCGATGTGGGTCATGCTGGGCCT TCTCGACGGTGGCGGTGGTCGAAGGCATCTACCAGATCCGGACGGGGAAGCTGGTGTCCC TGTCGGAGCAGGAGCTGGTGGACTGCGACACGCTGGACGACGGCTGCGACGGCGGCATCA GCTACCGCGCTCTGCGGTGGATCGCCTCCAACGGCGGCATCACCACGGAGACCGACTACC CGTACACGGGCACCACGGACGCTTGCAACAGGGCCAAGCTCTCCCACAACGCGGTCAGCA TCGCCGGGCTCCGGCGCGTTGCCACCCGGAGCGAGGCGTCGCTGGCCAACGCCGTGGCGG GGCAGCCCGTGGCCGTGTCCATCGAGGCCGGCGGCGACAACTTCCAGCACTACAAGAAGG GAGTGTACAACGGGCCCTGCGGGACCAACCTCAACCACGGCGTCACCGTCGTCGGCTACG GCCAGGAGGCGGCCGGCGGCGACAGGTACTGGATCGTCAAGAACTCGTGGGGGCAGGGGT GGGGCGACGACGGATACATCAGGATGAAGAAAGACGTCGCCGGCAAGCCGGAGGGGCTCT GCGGCATCGCCATCCGCCCGTCCTATCCACTAATGTGACATGGTGTGGTGTACATCTGTT TTCGTTTTAATTATCATTTTATTTTATTAAACAATAAATAAGTAGTCAACATATGGATCG ACTCAAACTTTTGCAGTTACGTGTACCAGTACACTTGTTGTAAATAATAATCCATGGCAT CTCGCGTGTAAACTTTATTCTGGTGC