Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005373_T020
CDS Infomation	cds chromosome:B73_RefGen_v4:2:171271075:171276315:-1 gene:Zm00001d005373 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperonin 60 subunit alpha 2 chloroplastic
Sequence	ATGAACCAGGATGAAGTGATCCCACATCTGGAGCCTGGAATGGTGCCTTCAACCGTGGAC CCTGATGGTGCTGGATATCCGGAAAGAGCAAATAGAGCCAAGAAGGCAGTCAAAATCAGT GCTCGCAGCCTCGCAAAGCTCGATAAGAATGAGGTAATGAAAGCTGCTGCAAAAGCTCGG GCATCATCCTCGGTTCTGCGACCAATAGATGCCCGCCATGGTCATGAAGCTGATGTCATC TCCAGCGGCAGTGCCAGTGTCAGGAGCAGCATGAGTGTTGACTACAGTGGCACAAAGGAA TCAAACAGCGAGATGAAACTTTCTCCGCTTCATAACTCATACCCCCAAAGCCTTGCAAGC CAGGATGAATACGATACCGGCACACCAACCGCAAGCAGTTTAAGCAGTCTGGTCAACATC CACAAGCTTGCATCCCACTCTCAGTTCAGTGCTGCGCCTCGCCCTGCACCTCCGGAAAGA CCTGTGCCGGCGATGGTGCGGCCACCTGTTCCCACCACACAAATAACCAACCCAGGGATA CCGCGGCCAGCTGTTCCCACAACACAAACAACCAACCCGATGTTCCAATCAGCCACATCT TATGTTCGAGAGAACCGAAGGGCCTCTGTCGTCTGGGATCAAGAGGCTGGTCGGTACGTG TCAGTTCCTGCACAGACAAGAACGGGAACTGGAGCCGACCTGCCAGCAAGAAACCCACGG TTCTTGGCGAACCCAAGTGGCGAGCCAAGCAGCCATGTGAGGGGTGTTGCACCCGGCAAC ACATCGTCCTCAGCAATGCCGTCAGGGCAGCCTTCGGAGAGGCTGACCTACTCTGGGCAG TCGATATTCTTCGGTGGCCCCATGCTGAACACCCCTAGCCTGGGCGCCCAGAGGAACGAG GCAGGCGCAAGAGCGCGTCCGGAGGGAAGCAGAGATCCTAATGCCCAGCAGCGTGACATC CGGGGTGAGAAAGCGAGGACAGGCTCCTTGCCAGTATTTGCTCCTGGGACGGTCCAGAGG AACCCGCCCTTTGACAAATGA

Peptide Sequence

PEP ID	Zm00001d005373_P020
PEP Infomation	pep chromosome:B73_RefGen_v4:2:171271075:171276315:-1 gene:Zm00001d005373 transcript:Zm00001d005373_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperonin 60 subunit alpha 2 chloroplastic
Sequence	MNQDEVIPHLEPGMVPSTVDPDGAGYPERANRAKKAVKISARSLAKLDKNEVMKAAAKAR ASSSVLRPIDARHGHEADVISSGSASVRSSMSVDYSGTKESNSEMKLSPLHNSYPQSLAS QDEYDTGTPTASSLSSLVNIHKLASHSQFSAAPRPAPPERPVPAMVRPPVPTTQITNPGI PRPAVPTTQTTNPMFQSATSYVRENRRASVVWDQEAGRYVSVPAQTRTGTGADLPARNPR FLANPSGEPSSHVRGVAPGNTSSSAMPSGQPSERLTYSGQSIFFGGPMLNTPSLGAQRNE AGARARPEGSRDPNAQQRDIRGEKARTGSLPVFAPGTVQRNPPFDK

Transcript Sequence

Transcript ID	Zm00001d005373_T020
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:171271075:171276315:-1 gene:Zm00001d005373 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperonin 60 subunit alpha 2 chloroplastic
Sequence	GCCGTACTGTCCCCTCTTCCCTTTTACTGCCGCCTGCCGGCCGCGAGGGAGGGAGGGACG GAGGTGCTCATCTGTGCGGCGGCTTCGGTGTCGGTCCCAGGGGAGGCGGGGAGCCATGGC GCGGAAGCACGGCTGGCAGCTCCCAGCCCACACCTTTGACAGATCGTTGCAATTACAGTT TTCTTCCTTCTGGTGGTTGCGTTTTATGCCTTCTTTGTGCCGTTTTTGGGAAAGCAAGTA GTTGAGTATATTGCAATTGGCGTTTATACTCATTCAGGCACTTGCAGTTTTCATCCTTTA CATTCGATGCACCAGTATAAACCCTGCGGATCCTGGGATCATGTCAAAGTTTGAGGATGG CCTTATCAATATACCAACCAATGGCTCTGGAATAGAAGGCATGAATTTGCCCCAGAAAGT AAACAATGCTACAGGAACAAACTCTCCAATGTCTACTTGCAGAAGTTCTCTAGATGGGCA TTCTAATCAAAGAGGTTCATCCATAGGGGAGGCAAACATGAATCTAGGATCACAACTGCC AAAGAAAAGATCAAGCTGTTGGTTGCTAGGTGGGCTTCTATGTGCTACATTTGTCAAGGA AGACTGCCGAAAAACTGATGACTCGGAGCAGCAAGCAAATGGGGAGGAGGCTCTGTTTTG CACATTATGTAATGCTGAGGTATGTCGATTTAGCTTTTCACCAGGCTTCACTATCTAGCT TGTGTTGTTCATCTTTGTTTCACAAAAGTAATTTCTCAGGTTCGCAAATTCAGCAAACAC TGCAGGAGTTGTGACAAGTGTGTGGATGGATTTGATCATCATTGTCGGGTACCTTTCTTT ACCTGTGCTGTGCTATTACATTACCTGTAATGTTTCATGATGTTTAGCTAATATGGTACA TGTACATCTATGCAGTGGCTAAATAACTGTGTTGGGCGGAAGAATTATTTCACATTCCTT GCTCTGATGGCAATCAGTCTTATCTGGGTATGTAATATCAGTTTGCTCTATATCCCTTTC CTCGAGTTACTTAGTTATAGGGTTTGTATAGATATTCCTTTTCCTTGTAGCAAGGCACTA AATATTTGAATTTCCTCTATGACAGCTTGCAATTGAATTTGGAGTGGGAATTGCTGTTAT TGTACTATGTTTTGTCGATAAGAATGCATCAAGAAATATTCAAGACAAGTTGGGGAATGG CTTGACTCGTGCTCCATTTGCTGTTATCGTGGTAAGTTGCTGTATTAGACAGTTGTAGCC TGTAGTGCATGAGAATCTCCTATTGACTATAAGTTGTTTGAAGTAACAAGTTTCAATCTC GAAAAGAGAAATTCAAACCCAGTTGATTTTTATTTTTTATGCTTTGTTATGATGCTTTCA CTTCATTCATTGTTTTGTTTTAAAGTAGAGTTGTGCAGTCAGTCTTGTCAGAATACAGCA ATTCAAACATTGTACCCAGTAGCACCATTTTTACCTTCAAGAAAACAAGAAGTGTAATCC TTCCTATGTATGGAATTATTCTTAGTATTGTTGACCCACCTTTTTTCTCAATCATGTTGA CACACTTATTTTTTCTGAAACATGTCTTTTTTTATAAGATCAGGCATGGTGACACACTTG TTTGTTTCTCGGCCATGTTGGTACACTTATTATAGCACATGCTACCATATTAGATGACTA TGCAATTCTGAATGAACCTTTTTCAGATTAAAATGTATTTTTAGCTGTTGCTGACAAAAG CTCTTTTTATGCAGGGCATATTTACCTTACTTTCATTGGTGGCATGCATACCTTTGGGCG AACTTCTCTTTTTCCACATAATATTGATAAGAAAGGTCTGCATGCAATTCCGTGGGCACT GTTACACATGGAAATTTCGGTCTGGTTTGCTCAGCTATGCTCCCTTTTCTATGTTGTATT TCAGGGGATTACAACTTATGATTATGTTGTTGCAATGAGAGCTATGAGTGAGGCAGCTCC AGAGGACGAGGAAGGAGAAAATATCATTTACTCGCCATCAAATTCAGCAACAACTGGGTT CAGTGTAGGAAGTTCACTTGGTATTCACCACAAAGGTGCTTGGTGTACTCCTCCAAGGAT ATTTATCGATCAGGTAAGCCATATGGCAAGTAGTGGCTTCCAAAAGCTAGCCTATGCAAT GCATACATGTTACTACTTTAAAAGCTTGATGAGAGCTCAAAGCAATAAGACACACAATTA TAATATTTAAATGAGCCTTTTAAACATACTAACTTTATATTTATGTTGACACCATGAACC AGGATGAAGTGATCCCACATCTGGAGCCTGGAATGGTGCCTTCAACCGTGGACCCTGATG GTGCTGGATATCCGGAAAGAGCAAATAGAGCCAAGAAGGCAGTCAAAATCAGTGCTCGCA GCCTCGCAAAGCTCGATAAGAATGAGGTAATGAAAGCTGCTGCAAAAGCTCGGGCATCAT CCTCGGTTCTGCGACCAATAGATGCCCGCCATGGTCATGAAGCTGATGTCATCTCCAGCG GCAGTGCCAGTGTCAGGAGCAGCATGAGTGTTGACTACAGTGGCACAAAGGAATCAAACA GCGAGATGAAACTTTCTCCGCTTCATAACTCATACCCCCAAAGCCTTGCAAGCCAGGATG AATACGATACCGGCACACCAACCGCAAGCAGTTTAAGCAGTCTGGTCAACATCCACAAGC TTGCATCCCACTCTCAGTTCAGTGCTGCGCCTCGCCCTGCACCTCCGGAAAGACCTGTGC CGGCGATGGTGCGGCCACCTGTTCCCACCACACAAATAACCAACCCAGGGATACCGCGGC CAGCTGTTCCCACAACACAAACAACCAACCCGATGTTCCAATCAGCCACATCTTATGTTC GAGAGAACCGAAGGGCCTCTGTCGTCTGGGATCAAGAGGCTGGTCGGTACGTGTCAGTTC CTGCACAGACAAGAACGGGAACTGGAGCCGACCTGCCAGCAAGAAACCCACGGTTCTTGG CGAACCCAAGTGGCGAGCCAAGCAGCCATGTGAGGGGTGTTGCACCCGGCAACACATCGT CCTCAGCAATGCCGTCAGGGCAGCCTTCGGAGAGGCTGACCTACTCTGGGCAGTCGATAT TCTTCGGTGGCCCCATGCTGAACACCCCTAGCCTGGGCGCCCAGAGGAACGAGGCAGGCG CAAGAGCGCGTCCGGAGGGAAGCAGAGATCCTAATGCCCAGCAGCGTGACATCCGGGGTG AGAAAGCGAGGACAGGCTCCTTGCCAGTATTTGCTCCTGGGACGGTCCAGAGGAACCCGC CCTTTGACAAATGACCTGCTCCTGCTCATGAAGTTTATCTGAAGTGCGATGATGCCGTTA CGCTGGAACACCCCCAGCCTGAAGAGTTGGCAGATAGTTAGGGCTGCTCTACTGGGGTTG CCAGACGGGCGGACAAGGCAGCCGTTGGATTGAAGGCTGCTGCCCTGCTGGCACTAGGCA GGTGCTAACGAGAACCACAAATATTGCTCGCAGTCAGTGCTGACATTTTTCAGTGTTGCG GGGGCGATGGAGTGACTGACGCACACTGTGTTTGTGTTAGGAGTTCATCAGATACTTGAT GCGCGACAGATAGGAAGAGCTAATTTCTGGCGATGTCAAACGCTGATTTGCAGCTGACTT TGTAGCGTCGATTGTGGTCACTGTGTGGTGTGTGTGTGCCATGGGATACTAGTAGACATG TGTAAAATGGTTAGTCGAGG