Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005368_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:171115961:171122381:1 gene:Zm00001d005368 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGACGTCGACGACGACGCTGTCCTCTCCGACGTCGACGAGGACCCACTCCCGCCC
CCCTCCACCTCTTCCGCCTCTTCCCACAAATCCCTTCCACAAGCTCAACCCCAATCACAG
TCCGATGCCCAGGCGCAGCAGCAGCGGCTGCTGGACCTGGCCGCGGAGCTCGAGGAGGAG
CGCCGCCTCCGCCGCGCAGCCGAGGCCTCCCTCGCAGAGGCCGAGCCCCGCGTCGCCCGC
TTCAAGGCCTTCGCGCAGGAAGCGCTCCGCAAGCGCGACGACCTCACCGCCCAAGCCGCG
GCCTCCGCGCGGTCCCTCGCCGCGCTCCAGGCCGAGGCCGCCACCGCCTCCTCCATGCTC
TCCTCTGGCTTCGAGAGGATCTCCGCCAAGGCCTCCCCTTCCTCGCCCCCCGCACCGCTC
CCGACCTCCCAGAAGTACTCCTCCGGCCTCCCGGCCCTCGCGTACGGCGTTCTCAAGCGC
GCCAACGATATCGTCGACGAACTCCTCGCCCAGATCGACGCCGCTAACCGCGACCGCGAT
CGCGCGCGGGAGCAGATGGAACACCGCAACTACCAGATCGCCATCGAGGTCTCTGAGCTT
GAGGCATCGCTCGCATCCAGGTCTGCCGAGGGCGAATCCCTCTCCAAGTCCCTCTCCCAG
CGTGAAGCCGAGATCTCCGAGCTCCGTGATAAAATCACCTCTCTCGAGGGGAAGCTCGCC
GCGCAGAGGCCCGTGCTCGCGGAACAGATCGGGTGCACCTCGAAGCTGTATCACGAGATG
CGGGAGGTGGTCAAGCTGGTCGATGCCGAAGCTGTCAGTGCCCTATCGGACTCGGTTTTT
GTCTGGAAGGAGACTGACGTCGAGGAGAGCCTCAAGGTGTCTCTGGAAGGGACGAAATTG
GCCTATGAGCTTGCGGCAATAGCTCTGGAGAAGGTTGGGGCTTGTATCGATGACAAGGAG
AGCAAGCTTAGACGTTTGGAGAACATGGTGGATGGACTGATTAAAGAGAAGGAGCACATT
AGTGTACTGCTCCGGAACGCACTGCAGGCCACCACAAGTGAGGTGTTAAAGGTTGCAGAG
GATGGTCTGAGAGAAGCTGGCATTGAGATTGGACTTAACGAGCGAAAGGAGCACATGCTA
GGGAGTGTGGAGAAGGACGAGGTTTATACCCTGGCAGGGGCTCTTGAGAATACCATGAAG
GAGTCTCAGGTCAAAATTATTGAGCTCCAACATCTTGTCGAAGCACTAAGGGCGGAGTCT
GGTTTACTTAGAACAAGGCTAGAAGGGCAAGAGAAGGAGATTGGTCAGCTAAGAAAGCAA
ATAAAAAATCTTGAAGAGAAGGAGAAGGTGGCAAATGAAAGCGTTGAGGGTCTGATGATG
GACGTGACAGCTGCTGAAGAGGAGATTAAACGGTGGAAGATGGCAGCAGAGGAGGAAGCT
GAAGCTGGTAGATCAATTGAACAAGAGTTCCAAATTCAGATATCATCCCTTCGCAAGGAG
TTGGACGAAGCAAACCGAGCTATGGTGGAGCTAGAAAACAAGCTGAAGTTCAAGGAAGAG
ACAGCTGCTGCTGCAATGGCGGCACGCGATGCTGCAGAGAAGTCTCTAAAGCTAGCAGAT
ACGCGATCGTCCAGGCTACGTGAGAGGCTGGAGGAGCTCAACAAGCAGCTCGAAGAATCA
GATACGAGAACCGAGTCGGTGAATCGCAATGGCCATAGGTACATGTGCTGGCCATGGCAG
TGGCTGGGACTGAACTACGTGCAGTTACCTCTAGCGGAGACAGACCAGACGTCCAACGAG
ATGGAGCTATCTGAGCCCCTAATAATATAG

Peptide Sequence

PEP ID

Zm00001d005368_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:171115961:171122381:1 gene:Zm00001d005368 transcript:Zm00001d005368_T003 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADVDDDAVLSDVDEDPLPPPSTSSASSHKSLPQAQPQSQSDAQAQQQRLLDLAAELEEE
RRLRRAAEASLAEAEPRVARFKAFAQEALRKRDDLTAQAAASARSLAALQAEAATASSML
SSGFERISAKASPSSPPAPLPTSQKYSSGLPALAYGVLKRANDIVDELLAQIDAANRDRD
RAREQMEHRNYQIAIEVSELEASLASRSAEGESLSKSLSQREAEISELRDKITSLEGKLA
AQRPVLAEQIGCTSKLYHEMREVVKLVDAEAVSALSDSVFVWKETDVEESLKVSLEGTKL
AYELAAIALEKVGACIDDKESKLRRLENMVDGLIKEKEHISVLLRNALQATTSEVLKVAE
DGLREAGIEIGLNERKEHMLGSVEKDEVYTLAGALENTMKESQVKIIELQHLVEALRAES
GLLRTRLEGQEKEIGQLRKQIKNLEEKEKVANESVEGLMMDVTAAEEEIKRWKMAAEEEA
EAGRSIEQEFQIQISSLRKELDEANRAMVELENKLKFKEETAAAAMAARDAAEKSLKLAD
TRSSRLRERLEELNKQLEESDTRTESVNRNGHRYMCWPWQWLGLNYVQLPLAETDQTSNE
MELSEPLII

Transcript Sequence

Transcript ID

Zm00001d005368_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:171115961:171122381:1 gene:Zm00001d005368 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTCCCGTTTGCTTCCCAGTTCCCACCCCGTGGTGCCAAGCTCGCGGAGCCGGCGACGCA
GCAAGGGATACGGTACCCTCCCGTCCACGCGACGACAGGACAGACACCCACCCCATCACC
GGAAGCACCGCCAAAGCCCAAAGCCGGCCAATTCCGACGCCATGGCCGACGTCGACGACG
ACGCTGTCCTCTCCGACGTCGACGAGGACCCACTCCCGCCCCCCTCCACCTCTTCCGCCT
CTTCCCACAAATCCCTTCCACAAGCTCAACCCCAATCACAGTCCGATGCCCAGGCGCAGC
AGCAGCGGCTGCTGGACCTGGCCGCGGAGCTCGAGGAGGAGCGCCGCCTCCGCCGCGCAG
CCGAGGCCTCCCTCGCAGAGGCCGAGCCCCGCGTCGCCCGCTTCAAGGCCTTCGCGCAGG
AAGCGCTCCGCAAGCGCGACGACCTCACCGCCCAAGCCGCGGCCTCCGCGCGGTCCCTCG
CCGCGCTCCAGGCCGAGGCCGCCACCGCCTCCTCCATGCTCTCCTCTGGCTTCGAGAGGA
TCTCCGCCAAGGCCTCCCCTTCCTCGCCCCCCGCACCGCTCCCGACCTCCCAGAAGTACT
CCTCCGGCCTCCCGGCCCTCGCGTACGGCGTTCTCAAGCGCGCCAACGATATCGTCGACG
AACTCCTCGCCCAGATCGACGCCGCTAACCGCGACCGCGATCGCGCGCGGGAGCAGATGG
AACACCGCAACTACCAGATCGCCATCGAGGTCTCTGAGCTTGAGGCATCGCTCGCATCCA
GGTCTGCCGAGGGCGAATCCCTCTCCAAGTCCCTCTCCCAGCGTGAAGCCGAGATCTCCG
AGCTCCGTGATAAAATCACCTCTCTCGAGGGGAAGCTCGCCGCGCAGAGGCCCGTGCTCG
CGGAACAGATCGGGTGCACCTCGAAGCTGTATCACGAGATGCGGGAGGTGGTCAAGCTGG
TCGATGCCGAAGCTGTCAGTGCCCTATCGGACTCGGTTTTTGTCTGGAAGGAGACTGACG
TCGAGGAGAGCCTCAAGGTGTCTCTGGAAGGGACGAAATTGGCCTATGAGCTTGCGGCAA
TAGCTCTGGAGAAGGTTGGGGCTTGTATCGATGACAAGGAGAGCAAGCTTAGACGTTTGG
AGAACATGGTGGATGGACTGATTAAAGAGAAGGAGCACATTAGTGTACTGCTCCGGAACG
CACTGCAGGCCACCACAAGTGAGGTGTTAAAGGTTGCAGAGGATGGTCTGAGAGAAGCTG
GCATTGAGATTGGACTTAACGAGCGAAAGGAGCACATGCTAGGGAGTGTGGAGAAGGACG
AGGTTTATACCCTGGCAGGGGCTCTTGAGAATACCATGAAGGAGTCTCAGGTCAAAATTA
TTGAGCTCCAACATCTTGTCGAAGCACTAAGGGCGGAGTCTGGTTTACTTAGAACAAGGC
TAGAAGGGCAAGAGAAGGAGATTGGTCAGCTAAGAAAGCAAATAAAAAATCTTGAAGAGA
AGGAGAAGGTGGCAAATGAAAGCGTTGAGGGTCTGATGATGGACGTGACAGCTGCTGAAG
AGGAGATTAAACGGTGGAAGATGGCAGCAGAGGAGGAAGCTGAAGCTGGTAGATCAATTG
AACAAGAGTTCCAAATTCAGATATCATCCCTTCGCAAGGAGTTGGACGAAGCAAACCGAG
CTATGGTGGAGCTAGAAAACAAGCTGAAGTTCAAGGAAGAGACAGCTGCTGCTGCAATGG
CGGCACGCGATGCTGCAGAGAAGTCTCTAAAGCTAGCAGATACGCGATCGTCCAGGCTAC
GTGAGAGGCTGGAGGAGCTCAACAAGCAGCTCGAAGAATCAGATACGAGAACCGAGTCGG
TGAATCGCAATGGCCATAGGTACATGTGCTGGCCATGGCAGTGGCTGGGACTGAACTACG
TGCAGTTACCTCTAGCGGAGACAGACCAGACGTCCAACGAGATGGAGCTATCTGAGCCCC
TAATAATATAGGTGCTCCGACCTCCATACTTGTACAGATTACAGATATATACAGATCCTG
CTCTTTCACTAGATAAGGGGGAACAGTAGTTTTTTTTTTGGGAGGGGGGTTGGGTTGATG
GGTTCTTGTGTAGATGTTTTCGCAATTTCTTGATGCATGCTTTGCGGAAAACGGGCGGGT
GCTGGAAGGCGCCGTGTAATTGTAAAAGGTACCACTTAGTGAAGATGCTGAGAAGTTCAT
TCTTTGACAAGATTGTTCTTGAAACAAGTCTCGCTTGATCTTCATTGTGATAACAATGTG
CTACACTGCTAC