Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005281_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:2:167638410:167646432:1 gene:Zm00001d005281 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA binding;abscisic acid binding
Sequence

ATGCTTCCTGAATCTTGGCGTCCATCAAGTCCAAGGCCAATGGCACCTAACCAATATAAT
AATTTTGGATCTGACAACCCCTTGGCACTTAGTGGTGGCACTGTAACATCAGCAGATACT
GCTACTTTTCGGCCTCCGATGTTCCCTGGAAATGGCTCCTTGTCAAATCAGACGGCTGTG
CCAACTTCGTCACACATGGGCATGAACACTCCCATGGTACAAGAACACCATCTACGAGGC
CAACAGATCCCATCCCTGCAAAAGCCACCTGGTCCACCACAGAATTTTGCTGTACAACTG
CAGAATGCACAGCCAGGACAGCCTCTGCAGGGGCATATTCCACAGATTGGGCAGCTTCAG
GCCCCACAATCCACGGGACCTGTTTCATTTGGCCAGAATATTTCATCTATGCAATTACCT
GGTCAACCTCCTGCATCACAGCCATTGATGCAACGGAATGCTTCTCTAGGTGCTTTACAT
GCCCCTCCATCTGGACAATCCAATCCAATGCAAGCTGTCCCTGGCCAGCAGCAACTTCCC
ACCAGTGTTGCTCCCCAAATGCTTCAGCAGTCGATGCAGCAGATGCCTTCACAAGCGCCA
CAGTTGCTGCTTCAACAGCAGGCAGCTTTGCAGTCTAGTTATCAGTCTTCACAGCAGGCG
ATTTATCAGCTTCAGCAACAGCTACAACTAATGCAGCAGCAGTCTAACCTAAATCAGCAA
CCCTCTGCGCAGTCTGGGCAGCCAGTGCAATCCAGTAACACTGGTGATCCGGGTGCCATT
ATTCCGACAAAAATTAATGCAATTTCGCAGCAGGTTGGTTCATCTGCAGTTTCTTCAACA
TGTAACTGGACAGAGCATACCTCCCCTGAAGGTTTTAAGTACTACTACAATAGCATTACT
CGTGAGAGTAAGTGGGAGAAGCCTGAAGAGTATGTGCTGTATGAGCAACAGCAGCAGAAA
CTGCTTTTGCTTCAACAGCACCAACAGAATATCGCTGTACAGCAACTGCAGTCACCGCCA
CAGGGTCAATCACTTCCATCCATGCAACCGATTCAACAGCTTCCCCAGGCACAAGGACAA
ACACAAATGCATATGAAACAGCAGGAATTAAATTATTCTCAATTTCAGGCAGCTGGTTCC
ATTGATCCCAACAGGATTCAACAGGGCATTCCAGCTGCGCAAGAACGTGCTTGGAAAAAT
TAA

Peptide Sequence

PEP ID

Zm00001d005281_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:2:167638410:167646432:1 gene:Zm00001d005281 transcript:Zm00001d005281_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA binding;abscisic acid binding
Sequence

MLPESWRPSSPRPMAPNQYNNFGSDNPLALSGGTVTSADTATFRPPMFPGNGSLSNQTAV
PTSSHMGMNTPMVQEHHLRGQQIPSLQKPPGPPQNFAVQLQNAQPGQPLQGHIPQIGQLQ
APQSTGPVSFGQNISSMQLPGQPPASQPLMQRNASLGALHAPPSGQSNPMQAVPGQQQLP
TSVAPQMLQQSMQQMPSQAPQLLLQQQAALQSSYQSSQQAIYQLQQQLQLMQQQSNLNQQ
PSAQSGQPVQSSNTGDPGAIIPTKINAISQQVGSSAVSSTCNWTEHTSPEGFKYYYNSIT
RESKWEKPEEYVLYEQQQQKLLLLQQHQQNIAVQQLQSPPQGQSLPSMQPIQQLPQAQGQ
TQMHMKQQELNYSQFQAAGSIDPNRIQQGIPAAQERAWKN

Transcript Sequence

Transcript ID

Zm00001d005281_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:167638410:167646432:1 gene:Zm00001d005281 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA binding;abscisic acid binding
Sequence

CAAGTATAATAATTACCATTCCTATTTTCTGCTTTACCTTCCTGGTTAGGGGTCGCCCTG
CATTTGGAGGTCCTGGTTTCAGTCCTCGATCGGATGCAGCACTTGTTATCAGGCCAACAG
CCAATCTTGATGAATCTAGGGGTCAGCATATGCTTCCTGAATCTTGGCGTCCATCAAGTC
CAAGGCCAATGGCACCTAACCAATATAATAATTTTGGATCTGACAACCCCTTGGCACTTA
GTGGTGGCACTGTAACATCAGCAGATACTGCTACTTTTCGGCCTCCGATGTTCCCTGGAA
ATGGCTCCTTGTCAAATCAGACGGCTGTGCCAACTTCGTCACACATGGGCATGAACACTC
CCATGGTACAAGAACACCATCTACGAGGCCAACAGATCCCATCCCTGCAAAAGCCACCTG
GTCCACCACAGAATTTTGCTGTACAACTGCAGAATGCACAGCCAGGACAGCCTCTGCAGG
GGCATATTCCACAGATTGGGCAGCTTCAGGCCCCACAATCCACGGGACCTGTTTCATTTG
GCCAGAATATTTCATCTATGCAATTACCTGGTCAACCTCCTGCATCACAGCCATTGATGC
AACGGAATGCTTCTCTAGGTGCTTTACATGCCCCTCCATCTGGACAATCCAATCCAATGC
AAGCTGTCCCTGGCCAGCAGCAACTTCCCACCAGTGTTGCTCCCCAAATGCTTCAGCAGT
CGATGCAGCAGATGCCTTCACAAGCGCCACAGTTGCTGCTTCAACAGCAGGCAGCTTTGC
AGTCTAGTTATCAGTCTTCACAGCAGGCGATTTATCAGCTTCAGCAACAGCTACAACTAA
TGCAGCAGCAGTCTAACCTAAATCAGCAACCCTCTGCGCAGTCTGGGCAGCCAGTGCAAT
CCAGTAACACTGGTGATCCGGGTGCCATTATTCCGACAAAAATTAATGCAATTTCGCAGC
AGGTTGGTTCATCTGCAGTTTCTTCAACATGTAACTGGACAGAGCATACCTCCCCTGAAG
GTTTTAAGTACTACTACAATAGCATTACTCGTGAGAGTAAGTGGGAGAAGCCTGAAGAGT
ATGTGCTGTATGAGCAACAGCAGCAGAAACTGCTTTTGCTTCAACAGCACCAACAGAATA
TCGCTGTACAGCAACTGCAGTCACCGCCACAGGGTCAATCACTTCCATCCATGCAACCGA
TTCAACAGCTTCCCCAGGCACAAGGACAAACACAAATGCATATGAAACAGCAGGAATTAA
ATTATTCTCAATTTCAGGCAGCTGGTTCCATTGATCCCAACAGGATTCAACAGGGCATTC
CAGCTGCGCAAGAACGTGCTTGGAAAAATTAAGTCTGCAGGTCGCAATAATAAAGCGCTA
GTCAAAGACTGGGGAAGTGTACAAGCCCTTGTGCTGCCCAATTTCAGTGCCTGCACAGCC
TTTCGCCAACGCTGATGAGTGTAACTCCGGATTTAGATTTAGACTGATACGTAGATGGTA
GATCCCGTATGTGTACATTGTTGCAACTTAGGTCATGTACTCGTGTATATTTTTCAGCGT
GCTGCCGTGCTGGTGTCCGTACCTAGTTGGTAGATGTCGTCACTTGTGTTTTATTTTCGA
CTGTGGCATGATTTGTTATGTTCGG