Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005250_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:2:165691081:165696603:1 gene:Zm00001d005250 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cellulose synthase9 description:Cellulose synthase A catalytic subunit 3 [UDP-forming]
Sequence	ATGGAGGGCGACGCGGACGGCGTGAAGTCGGGGAGGCGCGGGGGAGGGCAGGTGTGCCAG ATCTGCGGCGATGGCGTGGGCACTACGGCGGAGGGAGACGTCTTCACCGCCTGCGACGTC TGCGGGTTCCCGGTGTGCCGCCCCTGCTACGAGTACGAGCGCAAGGACGGCACACAAGCG TGCCCCCAGTGCAAAAACAAGTACAAGCGCCACAAGGGGAGTCCAGCGATCCGAGGGGAG GAAGGAGACGATACTGATGCCGATGATGCTAGCGACTTCAACTACCCTGCATCTGGCAAT GACGACCAGAAGCAGAAGATTGCTGACAGGATGCGCAGCTGGCGCATGAATGCTGGGGGC AGCGGGGATGTTGGCCGCCCCAAGTATGACAGTGGTGAGATCGGGCTTACCAAGTACGAC AGTGGTGAGATCCCTCGGGGATACATCCCGTCAGTCACTAACAGCCAGATTTCGGGAGAA ATCCCTGGTGCTTCCCCTGACCATCATATGATGTCTCCTACTGGGAACATTGGCAGGCGC GCCCCATTTCCCTATATGAATCATTCATCAAATCCGTCGAGGGAATTCTCTGGTAGCGTT GGGAATGTTGCCTGGAAAGAGAGGGTTGATGGCTGGAAAATGAAGCAGGACAAGGGAACA ATTCCCATGACGAATGGCACAAGCATTGCTCCCTCTGAGGGCCGGGGTGTTGGTGATATT GATGCATCAACTGATTACAACATGGAAGATGCCTTATTAAACGATGAAACTCGCCAGCCT CTATCTAGGAAAGTTCCACTTCCTTCCTCCAGGATAAATCCATACAGGATGGTCATTGTG CTACGATTGATTGTTCTAAGCATCTTCTTGCACTACCGGATCACAAATCCTGTGCGTAAT GCATACCCACTGTGGCTTCTATCTGTTATATGTGAGATCTGGTTTGCTCTTTCCTGGATA TTGGATCAGTTTCCAAAGTGGTTTCCAATCAACCGCGAGACTTACCTTGATAGACTCGCA TTAAGGTATGACCGGGAAGGTGAGCCATCTCAGTTGGCTGCTGTTGACATTTTTGTCAGT ACTGTCGACCCAATGAAGGAGCCTCCTCTTGTCACTGCCAATACCGTGCTATCCATTCTC GCTGTGGACTATCCTGTGGATAAGGTCTCTTGCTATGTATCTGATGATGGAGCTGCTATG CTGACATTTGATGCACTAGCTGAGACTTCAGAGTTTGCTAGAAAATGGGTGCCATTTGTT AAGAAGTACAACATTGAACCTAGAGCTCCTGAATGGTACTTCTCCCAGAAAATTGATTAC TTGAAGGACAAAGTGCACCCTTCATTTGTTAAAGACCGCCGGGCCATGAAGAGAGAATAT GAAGAATTCAAAATTAGGGTAAATGGCCTTGTTGCTAAGGCACAAAAAGTCCCTGAGGAA GGATGGATCATGCAAGATGGCACACCATGGCCAGGAAACAATACCAGGGACCATCCTGGA ATGATTCAGGTTTTCCTTGGTCACAGTGGTGGTCTTGATACTGAGGGTAATGAGCTACCC CGTTTGGTCTATGTTTCTCGTGAAAAACGTCCTGGATTCCAGCATCACAAGAAAGCTGGT GCCATGAATGCTCTTGTCCGCGTCTCAGCTGTGCTTACCAATGGACAATACATGTTGAAT CTTGATTGTGATCACTACATCAACAACAGTAAGGCTCTCAGGGAAGCTATGTGCTTCCTT ATGGATCCTAACCTAGGAAGGAGTGTCTGCTATGTTCAGTTTCCCCAGAGGTTCGATGGT ATTGATAGGAATGATCGATATGCCAACAGGAACACCGTGTTTTTCGATATTAACTTGAGA GGTCTTGATGGCATCCAAGGACCAGTTTATGTGGGCACTGGCTGTGTTTTCAACAGAACA GCTCTATATGGTTATGAGCCCCCAATTAAGCAAAAGAAGGGTGGTTTCTTGTCATCACTA TGTGGTGGCAGGAAGAAGGGAAGCAAATCAAAGAAGGGCTCAGACAAGAAAAAGTCACAG AAGCATGTGGACAGTTCTGTGCCAGTATTCAATCTTGAAGATATAGAGGAGGGAGTTGAA GGCGCTGGATTTGATGATGAGAAATCACTTCTTATGTCTCAAATGAGCTTGGAGAAGAGA TTTGGCCAATCTGCAGCTTTTGTTGCGTCCACTCTGATGGAATATGGTGGTGTTCCTCAG TCTGCGACTCCAGAATCTCTTCTGAAAGAAGCTATCCATGTCATAAGTTGTGGCTACGAG GACAAGACTGAATGGGGAACTGAGATCGCAGATTGGGTGGATCTATGGTTCTGTGACGGA AGATATTCTCACTGGGTTCAAGATGCACGCACGAGGCTGGCGGTCGATCTACTGCATGCC TAA

Peptide Sequence

PEP ID	Zm00001d005250_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:2:165691081:165696603:1 gene:Zm00001d005250 transcript:Zm00001d005250_T009 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cellulose synthase9 description:Cellulose synthase A catalytic subunit 3 [UDP-forming]
Sequence	MEGDADGVKSGRRGGGQVCQICGDGVGTTAEGDVFTACDVCGFPVCRPCYEYERKDGTQA CPQCKNKYKRHKGSPAIRGEEGDDTDADDASDFNYPASGNDDQKQKIADRMRSWRMNAGG SGDVGRPKYDSGEIGLTKYDSGEIPRGYIPSVTNSQISGEIPGASPDHHMMSPTGNIGRR APFPYMNHSSNPSREFSGSVGNVAWKERVDGWKMKQDKGTIPMTNGTSIAPSEGRGVGDI DASTDYNMEDALLNDETRQPLSRKVPLPSSRINPYRMVIVLRLIVLSIFLHYRITNPVRN AYPLWLLSVICEIWFALSWILDQFPKWFPINRETYLDRLALRYDREGEPSQLAAVDIFVS TVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFV KKYNIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKREYEEFKIRVNGLVAKAQKVPEE GWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAG AMNALVRVSAVLTNGQYMLNLDCDHYINNSKALREAMCFLMDPNLGRSVCYVQFPQRFDG IDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKQKKGGFLSSL CGGRKKGSKSKKGSDKKKSQKHVDSSVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKR FGQSAAFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKTEWGTEIADWVDLWFCDG RYSHWVQDARTRLAVDLLHA

Transcript Sequence

Transcript ID	Zm00001d005250_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:165691081:165696603:1 gene:Zm00001d005250 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cellulose synthase9 description:Cellulose synthase A catalytic subunit 3 [UDP-forming]
Sequence	GGGAGATGCGGTGCTGATCCGTGCCCCTGCTCGGATCTCGGGAGTGGTGCCGACTTGTGT CGGCTCGGCTCTGCCTAGGCCAGCTCCTTGTCGGTTCTGGGCGAGCTCGCCTGCCATGGA GGGCGACGCGGACGGCGTGAAGTCGGGGAGGCGCGGGGGAGGGCAGGTGTGCCAGATCTG CGGCGATGGCGTGGGCACTACGGCGGAGGGAGACGTCTTCACCGCCTGCGACGTCTGCGG GTTCCCGGTGTGCCGCCCCTGCTACGAGTACGAGCGCAAGGACGGCACACAAGCGTGCCC CCAGTGCAAAAACAAGTACAAGCGCCACAAGGGGAGTCCAGCGATCCGAGGGGAGGAAGG AGACGATACTGATGCCGATGATGCTAGCGACTTCAACTACCCTGCATCTGGCAATGACGA CCAGAAGCAGAAGATTGCTGACAGGATGCGCAGCTGGCGCATGAATGCTGGGGGCAGCGG GGATGTTGGCCGCCCCAAGTATGACAGTGGTGAGATCGGGCTTACCAAGTACGACAGTGG TGAGATCCCTCGGGGATACATCCCGTCAGTCACTAACAGCCAGATTTCGGGAGAAATCCC TGGTGCTTCCCCTGACCATCATATGATGTCTCCTACTGGGAACATTGGCAGGCGCGCCCC ATTTCCCTATATGAATCATTCATCAAATCCGTCGAGGGAATTCTCTGGTAGCGTTGGGAA TGTTGCCTGGAAAGAGAGGGTTGATGGCTGGAAAATGAAGCAGGACAAGGGAACAATTCC CATGACGAATGGCACAAGCATTGCTCCCTCTGAGGGCCGGGGTGTTGGTGATATTGATGC ATCAACTGATTACAACATGGAAGATGCCTTATTAAACGATGAAACTCGCCAGCCTCTATC TAGGAAAGTTCCACTTCCTTCCTCCAGGATAAATCCATACAGGATGGTCATTGTGCTACG ATTGATTGTTCTAAGCATCTTCTTGCACTACCGGATCACAAATCCTGTGCGTAATGCATA CCCACTGTGGCTTCTATCTGTTATATGTGAGATCTGGTTTGCTCTTTCCTGGATATTGGA TCAGTTTCCAAAGTGGTTTCCAATCAACCGCGAGACTTACCTTGATAGACTCGCATTAAG GTATGACCGGGAAGGTGAGCCATCTCAGTTGGCTGCTGTTGACATTTTTGTCAGTACTGT CGACCCAATGAAGGAGCCTCCTCTTGTCACTGCCAATACCGTGCTATCCATTCTCGCTGT GGACTATCCTGTGGATAAGGTCTCTTGCTATGTATCTGATGATGGAGCTGCTATGCTGAC ATTTGATGCACTAGCTGAGACTTCAGAGTTTGCTAGAAAATGGGTGCCATTTGTTAAGAA GTACAACATTGAACCTAGAGCTCCTGAATGGTACTTCTCCCAGAAAATTGATTACTTGAA GGACAAAGTGCACCCTTCATTTGTTAAAGACCGCCGGGCCATGAAGAGAGAATATGAAGA ATTCAAAATTAGGGTAAATGGCCTTGTTGCTAAGGCACAAAAAGTCCCTGAGGAAGGATG GATCATGCAAGATGGCACACCATGGCCAGGAAACAATACCAGGGACCATCCTGGAATGAT TCAGGTTTTCCTTGGTCACAGTGGTGGTCTTGATACTGAGGGTAATGAGCTACCCCGTTT GGTCTATGTTTCTCGTGAAAAACGTCCTGGATTCCAGCATCACAAGAAAGCTGGTGCCAT GAATGCTCTTGTCCGCGTCTCAGCTGTGCTTACCAATGGACAATACATGTTGAATCTTGA TTGTGATCACTACATCAACAACAGTAAGGCTCTCAGGGAAGCTATGTGCTTCCTTATGGA TCCTAACCTAGGAAGGAGTGTCTGCTATGTTCAGTTTCCCCAGAGGTTCGATGGTATTGA TAGGAATGATCGATATGCCAACAGGAACACCGTGTTTTTCGATATTAACTTGAGAGGTCT TGATGGCATCCAAGGACCAGTTTATGTGGGCACTGGCTGTGTTTTCAACAGAACAGCTCT ATATGGTTATGAGCCCCCAATTAAGCAAAAGAAGGGTGGTTTCTTGTCATCACTATGTGG TGGCAGGAAGAAGGGAAGCAAATCAAAGAAGGGCTCAGACAAGAAAAAGTCACAGAAGCA TGTGGACAGTTCTGTGCCAGTATTCAATCTTGAAGATATAGAGGAGGGAGTTGAAGGCGC TGGATTTGATGATGAGAAATCACTTCTTATGTCTCAAATGAGCTTGGAGAAGAGATTTGG CCAATCTGCAGCTTTTGTTGCGTCCACTCTGATGGAATATGGTGGTGTTCCTCAGTCTGC GACTCCAGAATCTCTTCTGAAAGAAGCTATCCATGTCATAAGTTGTGGCTACGAGGACAA GACTGAATGGGGAACTGAGATCGCAGATTGGGTGGATCTATGGTTCTGTGACGGAAGATA TTCTCACTGGGTTCAAGATGCACGCACGAGGCTGGCGGTCGATCTACTGCATGCCTAAGC GGCCGGCCTTCAAGGGATCGGCTCCCATCAATCTCTCAGACCGTCTGAACCAGGTGCTCC GGTGGGCTCTCGGTTCAGTGGAAATCCTTTTCAGCCGGCATTGCCCCCTATGGTACGGCT ACGGAGGACGCCTGAAGTTCTTGGAGAGATTCGCCTACATCAACACCACCATCTACCCGC TCACGTCCCTCCCGCTCCTCATTTACTGTATCCTGCCTGCCATCTGCCTGCTCACGGGGA AGTTCATCATCCCAGAGATCAGCAACTTCGCTAGTATCTGGTTCATCTCTCTCTTCATCT CGATCTTCGCCACGGGTATCCTGGAGATGAGGTGGAGCGGCGTGGGCATCGACGAGTGGT GGAGGAACGAGCAGTTCTGGGTCATCGGAGGCATCTCCGCCCACCTCTTCGCCGTCTTCC AGGGCCTCCTCAAGGTGCTTGCCGGCATCGACACCAACTTCACCGTCACCTCCAAGGCCT CGGATGAAGACGGCGACTTCGCGGAGCTGTACATGTTCAAGTGGACGACACTTCTGATCC CGCCCACCACCATCCTGATCATCAACCTGGTCGGCGTTGTTGCCGGCATCTCCTACGCCA TCAACAGCGGGTACCAGTCGTGGGGTCCGCTCTTCGGCAAGCTCTTCTTCGCCTTCTGGG TGATCGTTCACCTGTACCCGTTCCTCAAGGGTCTCATGGGTCGGCAGAACCGCACCCCGA CCATCGTGGTTGTCTGGGCGATCCTGCTGGCGTCGATCTTCTCCTTGCTGTGGGTTCGCA TCGATCCGTTCACCACCCGCGTCACTGGCCCGGATACTCGAACGTGTGGCATCAACTGCT AGGGAGGTGGAAGGTTTGTAGAAACAGAGAGATACCACGAATGTGCCGCTGCCACAAATT GTCTGTTAGTAAGTTATATAGGCAGGTGGCGTTATTTACAGCTACGTACACACAAGGGGA TACTCCGTTTATCACTGGTGTGCATTCTTTTGTTGATATAAGTTACTATATATACGTATT GCTTCTACTTTGTGGAGAGTGGCTGACAGGACCAGTTTTGTAATGTTATGAACAGCAAAG AAATAAGTTAGTT