Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005205_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:163509103:163514363:-1 gene:Zm00001d005205 gene_biotype:protein_coding transcript_biotype:protein_coding description:KH domain-containing protein SPIN1
Sequence

ATGTCAGGCCTCTACAACCAGGGCTTCTCCCCTGCAAGAACCCTCTCCCCCCAGATTAGG
AGCAACCCCGACGCTGATAGCCAGTACTTGGCCGAGCTTCTCGCCGAGCACCAGAAGTTG
GGGCCATTCATGCAGGTGCTGCCGATATGCAGCCGGCTGCTCAACCAAGAAATCATGCGG
GTGTCAAGCATGGTTCATGACCATGGATTTAGTGATCTTGACAGACGCCGGTTTAGAAGT
CCTAGCCCTATGTCTTCACCGATTGTCCGGCCTAATCTACATGGAAATGGTTTTGGTCCT
TGGAATGGGATGCACCAAGAGAGATTGGGCTTTCCTCCTCCTGGAACAAGTATGGACTGG
CAAGGAGCACCACCGAGCCCTGGCTCTTATATTGTCAAGAAGATCATGCGCTTGGAAGTT
CCCGTCGACTCTTACCCTAATTTCAACTTTGTGGGACGCATTCTAGGGCCAAGGGGTAAT
TCTCTAAAGCGAGTTGAATCATCAACTGGCTGCCGTGTTTTTATTAGAGGGAAGGGTTCC
GTCAAAGATACAGAAAAGGAGGACAAACTTAAAGGAAAACCTGGGTATGAACATCTGAAC
GAGCCACTGCATATATTAATCGAGGCTGAGTTACCAGCGAACATTGTTGATACAAGACTG
AGACAGGCACAAGAAGTCATGGAGGAATTGCTAAAGCCAGTGGACGAGTCACAAGATTTG
TACAAGAGGCAACAGCTGAGGGAGTTGGCTATGCTAAACTCTACTCTGAGAGAAGACAGT
CCTCACCCTGGAAGTGTCTCCCCTTTCAGCAACGGCGGCATGAAGCGCGCAAAACCAAGC
CAGTAG

Peptide Sequence

PEP ID

Zm00001d005205_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:163509103:163514363:-1 gene:Zm00001d005205 transcript:Zm00001d005205_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:KH domain-containing protein SPIN1
Sequence

MSGLYNQGFSPARTLSPQIRSNPDADSQYLAELLAEHQKLGPFMQVLPICSRLLNQEIMR
VSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQERLGFPPPGTSMDW
QGAPPSPGSYIVKKIMRLEVPVDSYPNFNFVGRILGPRGNSLKRVESSTGCRVFIRGKGS
VKDTEKEDKLKGKPGYEHLNEPLHILIEAELPANIVDTRLRQAQEVMEELLKPVDESQDL
YKRQQLRELAMLNSTLREDSPHPGSVSPFSNGGMKRAKPSQ

Transcript Sequence

Transcript ID

Zm00001d005205_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:163509103:163514363:-1 gene:Zm00001d005205 gene_biotype:protein_coding transcript_biotype:protein_coding description:KH domain-containing protein SPIN1
Sequence

GGGCTGGGACCTGGGAGTGGGTCCTCACTCCTCCCCCTCTCTCTCTATCATCACCCTTCT
TCCGCCGGAAGGAAAAGAGAAAAACACACACTCTCTTTCCGAGCTCTCTCGCTGTCTCTC
ACCCAGCCGCCACCATGTCAGGCCTCTACAACCAGGGCTTCTCCCCTGCAAGAACCCTCT
CCCCCCAGATTAGGAGCAACCCCGACGCTGATAGCCAGTACTTGGCCGAGCTTCTCGCCG
AGCACCAGAAGTTGGGGCCATTCATGCAGGTGCTGCCGATATGCAGCCGGCTGCTCAACC
AAGAAATCATGCGGGTGTCAAGCATGGTTCATGACCATGGATTTAGTGATCTTGACAGAC
GCCGGTTTAGAAGTCCTAGCCCTATGTCTTCACCGATTGTCCGGCCTAATCTACATGGAA
ATGGTTTTGGTCCTTGGAATGGGATGCACCAAGAGAGATTGGGCTTTCCTCCTCCTGGAA
CAAGTATGGACTGGCAAGGAGCACCACCGAGCCCTGGCTCTTATATTGTCAAGAAGATCA
TGCGCTTGGAAGTTCCCGTCGACTCTTACCCTAATTTCAACTTTGTGGGACGCATTCTAG
GGCCAAGGGGTAATTCTCTAAAGCGAGTTGAATCATCAACTGGCTGCCGTGTTTTTATTA
GAGGGAAGGGTTCCGTCAAAGATACAGAAAAGGAGGACAAACTTAAAGGAAAACCTGGGT
ATGAACATCTGAACGAGCCACTGCATATATTAATCGAGGCTGAGTTACCAGCGAACATTG
TTGATACAAGACTGAGACAGGCACAAGAAGTCATGGAGGAATTGCTAAAGCCAGTGGACG
AGTCACAAGATTTGTACAAGAGGCAACAGCTGAGGGAGTTGGCTATGCTAAACTCTACTC
TGAGAGAAGACAGTCCTCACCCTGGAAGTGTCTCCCCTTTCAGCAACGGCGGCATGAAGC
GCGCAAAACCAAGCCAGTAGAGAAAGGTTTCAGGCTCTCCTCCACCCTCCTCCACTCCAG
TCGTTCTTGGTGCAGCACCAGCAAGGTGGTCGAGACGAGGAGGAAATCGCTGGTCGTTGA
ACTGTCTCCATCTTCGGTGGATCCGGCCATTTTGCTGCTGTAAGGTGATGGGCATTCGTT
CTATTCGTTACTGACTGTTGACCAGATTATGATGCCGTGGTTTCAGGGGAGACTAGCTAT
GCCTATGGCCCTGATAATTAGTGTGAGCTGGTTCGTTTAGGTGTTTAATTAGTTTGTATT
ATTATTATTCGCGTTACGTTGTGGAGTAGTAGCAAACGTCACAGCTGGTGATGCACTCCG
CTCTGACAGTTTGATGAGGACAGCTTTG