Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005164_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:2:161924904:161932689:-1 gene:Zm00001d005164 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 28
Sequence	ATGCTCAAGGTTGCAGCTGAGTGCCACCTGCATGGTTTGGTTCATCGGGACATGAAACCT GAGAACTTCCTATTCAAATCAAAAAAGGAGGACTCGCCCCTTAAGGCTACAGATTTTGGT CTTTCAGACTTCATAAAACCAGGGAGGCAATTCCGTGACATTGTTGGAAGTGCCTACTAC GTAGCACCAGAAGTACTCAAACGCAGGTCAGGGCCAGAATCCGATGTTTGGAGTATAGGT GTTATAACCTATATTTTGCTGTGTGGAAGACGACCATTCTGGGACAAAACAGAAGATGGG ATATTTAAAGAGGTCTTAAAAAAGAAGCCAGATTTCCGCCGCAAGCCTTGGTCAAACATT ACTTCGAGTGCAAAAGATTTTGTACAAAAATTACTAGTTAAGGATCCCCGTGCAAGACTA ACTGCTGCACAGGCATTATCACATGATTGGGTGAGAGAAGGAGGAAAGGCATCTGAAATA CCCTTGGATATATCAGTATTACATAATATGCGTCAGTTTGTGAAATACAGTCGTTTCAAG CAATTTGCTTTAAGGGCATTAGCATCTACATTAAACTCAGAAGAGATGTCTGATCTTCGT GATCAATTCAATGCCATTGATGTTGACAAAAATGGAACGATTAGTCTTGAGGAACTGAAG CAGGCTCTTGCAAAGGATGTTCCATGGAGATTAAAGGGTCCACGTGTTTTAGAGATCATT GAAGCGATTGACAGTAATACAGATGGGCTAGTTGATTTTGAGGAGTTTGTTGCTGCAACA CTACACGTGCATCAGCTGGTGGAACATGATACTGAGAAGTGGAAATCATTGTCTCAAGCT GCATTTGATAAATTTGATGTTGACAGAGATGGCTACATCACACCTGATGAACTTAGAATG CATACAGGAATGAAGGGTTCTATTGATCCCCTCCTGGAGGAGGCTGACATTGACAAAGAT GGCAAGATAAGCCTAGATGAATTTCGCCGGCTCTTGAAGACTGCAAGCATGAGCGCACGC AATGTACAAACTCCTAGGGGTGTTCGCAAGTCATAG

Peptide Sequence

PEP ID	Zm00001d005164_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:2:161924904:161932689:-1 gene:Zm00001d005164 transcript:Zm00001d005164_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 28
Sequence	MLKVAAECHLHGLVHRDMKPENFLFKSKKEDSPLKATDFGLSDFIKPGRQFRDIVGSAYY VAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLKKKPDFRRKPWSNI TSSAKDFVQKLLVKDPRARLTAAQALSHDWVREGGKASEIPLDISVLHNMRQFVKYSRFK QFALRALASTLNSEEMSDLRDQFNAIDVDKNGTISLEELKQALAKDVPWRLKGPRVLEII EAIDSNTDGLVDFEEFVAATLHVHQLVEHDTEKWKSLSQAAFDKFDVDRDGYITPDELRM HTGMKGSIDPLLEEADIDKDGKISLDEFRRLLKTASMSARNVQTPRGVRKS

Transcript Sequence

Transcript ID	Zm00001d005164_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:161924904:161932689:-1 gene:Zm00001d005164 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 28
Sequence	GGAGCCACCGCCATTTTTTTTACTCCCGAAACCAGGCAGGAGGGAGGAGGCGACGACATC GCCATCACACCAGATCACTGAAGAAGAGAGAGGCGCGTCGAGTCTCCCCAAAGAACGAGC TAGTACAAAGTCTCCTCTTCCTTTGACTCCGAATCCCCTAGACCATTGATGGTTGCGGGG GCACCGGAAGGAGCCACTGACGATGGGCCTCTGCTCCTCCTCCACCGCCGCCCGGGCCGC CTCCGACCCCGGCGCCGCAGCCGCGGGTGATGCCGCCGCGGCAAAGAAGGGGCGCGGGAT CGTCGCGTGCGGGAAGCGGACCGACTTCGGATACGACAAGGATTTCGAGGTGCGCTACTC GCTTGGGAAGCTTTTGGGCCACGGCCAGTTCGGCTACACCTTTGCCGCCGTCGATCGCGC CTCCACCGAGCGCGTCGCCGTCAAGCGCATCGACAAGAATAAGGTACTGCTATTCGTGCT CTGATCGCCGGTGACCGGGCCTTCATCGTTCCTTTTCTCATTACCTTATCGGCGGAGGAG CGTCTCGTGTTGCTGGCTGGCTGACGGGTGGGCCAGGCCTGAGACCTCATTGTGTAGTTA TGCTGTGTCACGCCGCCAGCTGGGCTAGCCTGCAGGTTTTGCTGTTGGTGCTTCTCGTTT ATCACGAGTGCGGTAGCTTCGGAAAAGTCACAAGTTGCCAAATGCCAATTGCCTCGGTAC ACTGCACATGGACAAATCGGCAGAAACAGGAATTTCAAATAAAGACATCTATGCTGACTT GCCCTAAAAAAAAGAAAAGACGTGCTGACTTATTTGGTGTTACTGTACACATCTGCTAAT TTGGGCAGTCTTTTCCTTTCCGAGAACACGTAGGAGAGAGCTCCTCATCTTTGGATTAGA TTACATAGTGTGGGCAAGTTAGATCTACTGATTAGCGGCCATGGAAGCTACAGAGATCAT GAGTTCACCACTGATGGTTTGGTTCTCGTTTTCAGTGTCACGAATTGCGTCTGTATTACA AAACTTATTGATGAGCATATCATGGATCATGGATAATGACAGCTCTTCTTTGGCCTTAAG CAGTTGTGACATAACGGTATTAGGAACATATTTGGTTTTCTGCACTTTTGTCTAAATGAA GGTAACTGATCATTCTTTTTTATCTGTAATGAAATAGGCTGTATAAGAAATATAACACTT CCAAAAATGATCCTTGGCCTCAACGGACACATGTTGGTTTACATTTGTTCCTATGCGCAT TCACTATCAGTACATCATAGAGTGTTATTTGTTCATAATATCAAGAAAAGTACAGAACTA ACTCATATTTTGAAATATAATCTACAGAATTAACTTGACACAAATGGGCTATTTTCCTTG CAGATGGTCCTTCCTGTTGCTGTTGAAGACGTAAAGAGAGAAGTTAAAATCTTAAAGGCA TTACAAGGGCACGAAAATGTTGTACACTTTTACAATGCATTCGAAGATGACAACTATGTT TATATAGTCATGGAATTATGTGAGGGTGGCGAGCTACTTGATCGGATATTAGCCAAGTAA GAAATATCATAATGCTTAGATGTCTATGACAGCTCTTATCTTACCCTTGTTGCACAAGTG TCGTATTATGTGTTCTCCCTCTGTTAACTTATATGGAGTATGCGCAACAGCGCAAGGTTA AGCTAAGTATTTACCTCTTTTTGTTCAACTAAGTGTTTCTTTTACGTGTCATTTCTCTTT TCAGAGTGGATTCCAGAATATTTCTTGAATTTCTGCTTTTGTTATTTTGATTGTCTGGTA ATTTTTTGTACTAGAGCATAAACACAATAGTTTTTCTTATGAAGATAGTATTGTCTAGAT ACTGAGCCTACTAGATATAGCCATATAGGTTTCGCTATAATTTGATTCGTCTCTGTCTTA TATTGACACTGCACAGTGAAGCATGGCAAGAGTCCGTATATGATAAGAAGTTTCTTGATA TGTATATCTAGCATTATTGATGTATTGAGATGGGACATCCTAGTCACTTCCATACTTCTT TTAGAAAAGAAGACATCATAGTTTCCTACTCATCTATGCTGTGTTTACACTTTACACTCT TTCTATATAGTGCTGCTGTTCTGATGTATCTAGAAGGCATCTTATGCTGGAATTCATATT TTGTGCCTGAACAGGAAAGATAGTCGTTACAGCGAGAAAGATGCTGCAGTAGTTGTCCGA CAGATGCTCAAGGTTGCAGCTGAGTGCCACCTGCATGGTTTGGTTCATCGGGACATGAAA CCTGAGAACTTCCTATTCAAATCAAAAAAGGAGGACTCGCCCCTTAAGGCTACAGATTTT GGTCTTTCAGACTTCATAAAACCAGGGAGGCAATTCCGTGACATTGTTGGAAGTGCCTAC TACGTAGCACCAGAAGTACTCAAACGCAGGTCAGGGCCAGAATCCGATGTTTGGAGTATA GGTGTTATAACCTATATTTTGCTGTGTGGAAGACGACCATTCTGGGACAAAACAGAAGAT GGGATATTTAAAGAGGTCTTAAAAAAGAAGCCAGATTTCCGCCGCAAGCCTTGGTCAAAC ATTACTTCGAGTGCAAAAGATTTTGTACAAAAATTACTAGTTAAGGATCCCCGTGCAAGA CTAACTGCTGCACAGGCATTATCACATGATTGGGTGAGAGAAGGAGGAAAGGCATCTGAA ATACCCTTGGATATATCAGTATTACATAATATGCGTCAGTTTGTGAAATACAGTCGTTTC AAGCAATTTGCTTTAAGGGCATTAGCATCTACATTAAACTCAGAAGAGATGTCTGATCTT CGTGATCAATTCAATGCCATTGATGTTGACAAAAATGGAACGATTAGTCTTGAGGAACTG AAGCAGGCTCTTGCAAAGGATGTTCCATGGAGATTAAAGGGTCCACGTGTTTTAGAGATC ATTGAAGCGATTGACAGTAATACAGATGGGCTAGTTGATTTTGAGGAGTTTGTTGCTGCA ACACTACACGTGCATCAGCTGGTGGAACATGATACTGAGAAGTGGAAATCATTGTCTCAA GCTGCATTTGATAAATTTGATGTTGACAGAGATGGCTACATCACACCTGATGAACTTAGA ATGCATACAGGAATGAAGGGTTCTATTGATCCCCTCCTGGAGGAGGCTGACATTGACAAA GATGGCAAGATAAGCCTAGATGAATTTCGCCGGCTCTTGAAGACTGCAAGCATGAGCGCA CGCAATGTACAAACTCCTAGGGGTGTTCGCAAGTCATAGTTTTCTGTTTTTTGTAGTTCA CATAACTGAACTAGAGAGCAGCAGCACATGTGATTGGAGAAAGGCTTTTCCATGTAAATT AGACAATCAATAATACACATGAATGGAGGTAATCCGTAGTTGTTCCTTGAAAACGAGCAC TGTATTCTTGCTATTGCAATACTATGTTTGGTTTGTTCCCAG