Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005158_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:161666601:161668813:-1 gene:Zm00001d005158 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 3

Sequence

ATGGCCACCGTGAACGCCACGACGACGACGGCAGGGTCCGGCAAGCAGACCGACGCGGCG
CCGTCCCCTCCGGCGGCAGCGGCGGCGGCGTGCAGAAGCCTCTCCGGCGCCGACCTGGCC
CTCAGGGTGCTCCTGTTCGCGGTGACGCTGTCGGGGCTCGTCGTGCTGGCCACCGCCAAG
CAGACCGTGCGCGTCCCGGTCCCGCAGATTCCAGGGCTCGTCCTCTCGCTCCCGGCCAAG
TTCAAGGACTCGCCGGCGCTCATATATCTGCTCGTGGCGCTCTGCGTGACGTGCTTCTAC
AGCCTGCTGTCGACGGCCTTCACCTCGCTTAAGCTCCTCTCCGGCTCATCTCCCAGCAGG
ACTCTCTTCCTCCTTGTTCTGTTCGATGTGTTCTATGCAGCTATCATGGCTTCGGCGACC
GGCTCAGCGGGTGGTGTAGCGTGGATCGGGCTCAAGGGCAACTCACACACCAACTGGAAC
AAGATCTGCAACATCTACAGCAAGTTCTGCCGTCACATTGGCAGCTCTGTTTTCCTGGGC
CTCATCGCCTCCGTCGTCCTCGTCCTGCTTACCATCCTCAACGCCCACTCCTTATACCGC
CGCAGTCGCTAG

Peptide Sequence

PEP ID

Zm00001d005158_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:161666601:161668813:-1 gene:Zm00001d005158 transcript:Zm00001d005158_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 3

Sequence

MATVNATTTTAGSGKQTDAAPSPPAAAAAACRSLSGADLALRVLLFAVTLSGLVVLATAK
QTVRVPVPQIPGLVLSLPAKFKDSPALIYLLVALCVTCFYSLLSTAFTSLKLLSGSSPSR
TLFLLVLFDVFYAAIMASATGSAGGVAWIGLKGNSHTNWNKICNIYSKFCRHIGSSVFLG
LIASVVLVLLTILNAHSLYRRSR

Transcript Sequence

Transcript ID

Zm00001d005158_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:161666601:161668813:-1 gene:Zm00001d005158 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 3

Sequence

ACAAACACACAACAGCCGCCGCGCACGCGATCGACGACGACGGCCGCCGGATAGTTAGCT
CCTCCTTGCAGCTAGCTTCTCTAGCTAATAATTCTAGCTAGCCACCACCACCTGCTGCCT
TAGCCAGAGACAAAGAGAGAGCCATGGCCACCGTGAACGCCACGACGACGACGGCAGGGT
CCGGCAAGCAGACCGACGCGGCGCCGTCCCCTCCGGCGGCAGCGGCGGCGGCGTGCAGAA
GCCTCTCCGGCGCCGACCTGGCCCTCAGGGTGCTCCTGTTCGCGGTGACGCTGTCGGGGC
TCGTCGTGCTGGCCACCGCCAAGCAGACCGTGCGCGTCCCGGTCCCGCAGATTCCAGGGC
TCGTCCTCTCGCTCCCGGCCAAGTTCAAGGACTCGCCGGCGCTCATATATCTGCTCGTGG
CGCTCTGCGTGACGTGCTTCTACAGCCTGCTGTCGACGGCCTTCACCTCGCTTAAGCTCC
TCTCCGGCTCATCTCCCAGCAGGACTCTCTTCCTCCTTGTTCTGTTCGATGTGTTCTATG
CAGCTATCATGGCTTCGGCGACCGGCTCAGCGGGTGGTGTAGCGTGGATCGGGCTCAAGG
GCAACTCACACACCAACTGGAACAAGATCTGCAACATCTACAGCAAGTTCTGCCGTCACA
TTGGCAGCTCTGTTTTCCTGGGCCTCATCGCCTCCGTCGTCCTCGTCCTGCTTACCATCC
TCAACGCCCACTCCTTATACCGCCGCAGTCGCTAGTTAAGGAATTGATGAATATGCATAT
ATGCATGGGATGTGATGAGTGACATGGCATCTATTTTGTATTGCAGCAGTAGTCTCTGCA
ATCGAACAATGTAGAGCGTGAGCTGTATCTTGTACTGCATGTTAGAAAATTGTGTGCTTT
TAAGATTAGAAA