Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005149_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:161142292:161146791:-1 gene:Zm00001d005149 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGGCGGCAGCGATCATCATGCCTCCACATACAGACCCACCACGGCCAGCCACAGCGAGT AATCCCACCGCTCCCGCTTCCCATCCCCAACGCCAGCGAGACGCCCCGACACCGTCCCTA CGCGCGCTCTTCCTCCGCGCCGTGGACCCTTCCCGCCCCTCGTCATGGTCCACGGCCGTC GCTGATCTTCTCTCCTCCGGTGACCCCGTCGCCGCGCTGGCCGTGTTCGCTGCCGCCCTC CGAGCCAACCCCGCTGCGCTCCGGCCGGCCCTGCCCCCAGCCCTTCGCGCCGCCGCCGCC GCCACCTCCCTCTCCGCCGGTCGCCAGCTCCACCTCCTCGCGCTCCGCTCGGGCCTCTTC CCCTCCGACGCCTACTGCGCCTCCGCCCTCCTCCACATGTACCACCATTGCTTCCGTCCC CTCGATGCCCGCAGGGCGTTCGACGAAATCCCCACCCCCAACCCCGTCATTGTCACTGCC ATGGCGTCCGGTTGCATGCGCAACAACCTCGTATATACCACGCTCTCTATCTTCCGCTCC ATGGTGGCCTCTGGTTCTGCGGGAGTGGTCGACGAGGCGGCTGCACTGGTAGCGCTCTCT GCATCTGCTCGTGTCCCTGACCGTGGCATTACCGGTGGTATTCATGCACTTGTCTCCAAG ATTGGCTTGGACGGGCAGACAGGGGTAGCAAACACGATAATAGACGCGTATGCAAAGGGC GGTGGTCATGACCTGGGGGCTGCGAGGAAGCTCTTTGATATGATGGATAGGGATGTGGTG TCCTGGAACACGATGATTGCATTATACGCGCAGAATGGACTGTCAACTGAGGCACTTGGG TTGTATAGCAAGATGCTGATTGTGGGAGGTGATGTTAGATGCAATGCGGTAACCTTGTCA GCCGTGCTATTGGCCTGTGCGCATGCAGGGGCAATACAAACTGGAAAGCGCATCCATAAT CAGGTGGTAAGAATGGGGTTGGAGGACAATGTCTATGTTGGGACTTCTGTAGTTGATATG TACAGCAAGTGTGGAAAAGTTGAAATGGCATGGAAAGCCTTTCAAAAAATTAAGGGAAAG AATATCCTTTCATGGTCTGCCATGATTGCTGGCTATGGCATGCATGGATATGGCCAAGAA GCCCTTCATGTTTTCACTGACATGAGGAAGTCAGGGCTAAAGCCAAACTACATAACCTTT ATCACAGTTTTAGCTGCTTGCAGTCATGCTGGTCTTTTGAGTGAGGGCCGTTATTGGTAC AATACCATGAAAACTGAGTTCGGAATTGAACCTGGTGTCGAGCACTATGGATGCATGGTC GATCTTCTTGGCCGTGCTGGTTGTCTTGATGAAGCTTATGGCCTTATTAAAGAAATGAAA GTCAAACCTGATGCTGCTTTGTGGGGAGCTCTTCTTAGTGCATGCCGAATATACAAAAAT GTTGAGTTGGCAAAAATTTGTGCAGAAAGATTGTTTGAGTTGGATGCAACTAACTCTGGG TATTATGTTCTCTTGTCAAATATATATGCAGAAGCTGGAATGTGGAAAGAAGTGGAAAGA ATGAGAGTTCTGGTTAAAACCAGAGGAATAGAAAAACCTCCAGGGTATAGCTCGGTTGAG TTGAAAGGTAAAACCCATTTGTTTTATGTTGGGGACAAGAGTCATCCACAGTACAAGGAA ATCTATGCTTATTTGGAGAAATTGCTTGAGAGAATTCATGATGCAGGCTATGTACCAAAC ACAGGTTCTGTTCTTCATGATTTGGATGTAGAAGAGAGAGAATCCATGTTGCGCATCCAT AGTGAAAAGCTTGCTGTTGCCTTTGCCCTGATGAACTCTGTACAAGGGTCAGTAATCCAT GTCATAAAGAATCTCCGGGTCTGCACTGATTGCCATGCAGCAATAAAGATTATTACAAAG CTTACTGGACGAGAGATAATTATTAGAGACCTAAAGCGCTTTCATCATTTCAAGGATGGA TTATGCTCATGTGGGGATTATTGGTGA

Peptide Sequence

PEP ID	Zm00001d005149_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:161142292:161146791:-1 gene:Zm00001d005149 transcript:Zm00001d005149_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MAAAIIMPPHTDPPRPATASNPTAPASHPQRQRDAPTPSLRALFLRAVDPSRPSSWSTAV ADLLSSGDPVAALAVFAAALRANPAALRPALPPALRAAAAATSLSAGRQLHLLALRSGLF PSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRS MVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKG GGHDLGAARKLFDMMDRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLS AVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGK NILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWY NTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKN VELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVE LKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLRIH SEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFKDG LCSCGDYW

Transcript Sequence

Transcript ID	Zm00001d005149_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:161142292:161146791:-1 gene:Zm00001d005149 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	AAGGAATGGCGGCAGCGATCATCATGCCTCCACATACAGACCCACCACGGCCAGCCACAG CGAGTAATCCCACCGCTCCCGCTTCCCATCCCCAACGCCAGCGAGACGCCCCGACACCGT CCCTACGCGCGCTCTTCCTCCGCGCCGTGGACCCTTCCCGCCCCTCGTCATGGTCCACGG CCGTCGCTGATCTTCTCTCCTCCGGTGACCCCGTCGCCGCGCTGGCCGTGTTCGCTGCCG CCCTCCGAGCCAACCCCGCTGCGCTCCGGCCGGCCCTGCCCCCAGCCCTTCGCGCCGCCG CCGCCGCCACCTCCCTCTCCGCCGGTCGCCAGCTCCACCTCCTCGCGCTCCGCTCGGGCC TCTTCCCCTCCGACGCCTACTGCGCCTCCGCCCTCCTCCACATGTACCACCATTGCTTCC GTCCCCTCGATGCCCGCAGGGCGTTCGACGAAATCCCCACCCCCAACCCCGTCATTGTCA CTGCCATGGCGTCCGGTTGCATGCGCAACAACCTCGTATATACCACGCTCTCTATCTTCC GCTCCATGGTGGCCTCTGGTTCTGCGGGAGTGGTCGACGAGGCGGCTGCACTGGTAGCGC TCTCTGCATCTGCTCGTGTCCCTGACCGTGGCATTACCGGTGGTATTCATGCACTTGTCT CCAAGATTGGCTTGGACGGGCAGACAGGGGTAGCAAACACGATAATAGACGCGTATGCAA AGGGCGGTGGTCATGACCTGGGGGCTGCGAGGAAGCTCTTTGATATGATGGATAGGGATG TGGTGTCCTGGAACACGATGATTGCATTATACGCGCAGAATGGACTGTCAACTGAGGCAC TTGGGTTGTATAGCAAGATGCTGATTGTGGGAGGTGATGTTAGATGCAATGCGGTAACCT TGTCAGCCGTGCTATTGGCCTGTGCGCATGCAGGGGCAATACAAACTGGAAAGCGCATCC ATAATCAGGTGGTAAGAATGGGGTTGGAGGACAATGTCTATGTTGGGACTTCTGTAGTTG ATATGTACAGCAAGTGTGGAAAAGTTGAAATGGCATGGAAAGCCTTTCAAAAAATTAAGG GAAAGAATATCCTTTCATGGTCTGCCATGATTGCTGGCTATGGCATGCATGGATATGGCC AAGAAGCCCTTCATGTTTTCACTGACATGAGGAAGTCAGGGCTAAAGCCAAACTACATAA CCTTTATCACAGTTTTAGCTGCTTGCAGTCATGCTGGTCTTTTGAGTGAGGGCCGTTATT GGTACAATACCATGAAAACTGAGTTCGGAATTGAACCTGGTGTCGAGCACTATGGATGCA TGGTCGATCTTCTTGGCCGTGCTGGTTGTCTTGATGAAGCTTATGGCCTTATTAAAGAAA TGAAAGTCAAACCTGATGCTGCTTTGTGGGGAGCTCTTCTTAGTGCATGCCGAATATACA AAAATGTTGAGTTGGCAAAAATTTGTGCAGAAAGATTGTTTGAGTTGGATGCAACTAACT CTGGGTATTATGTTCTCTTGTCAAATATATATGCAGAAGCTGGAATGTGGAAAGAAGTGG AAAGAATGAGAGTTCTGGTTAAAACCAGAGGAATAGAAAAACCTCCAGGGTATAGCTCGG TTGAGTTGAAAGGTAAAACCCATTTGTTTTATGTTGGGGACAAGAGTCATCCACAGTACA AGGAAATCTATGCTTATTTGGAGAAATTGCTTGAGAGAATTCATGATGCAGGCTATGTAC CAAACACAGGTTCTGTTCTTCATGATTTGGATGTAGAAGAGAGAGAATCCATGTTGCGCA TCCATAGTGAAAAGCTTGCTGTTGCCTTTGCCCTGATGAACTCTGTACAAGGGTCAGTAA TCCATGTCATAAAGAATCTCCGGGTCTGCACTGATTGCCATGCAGCAATAAAGATTATTA CAAAGCTTACTGGACGAGAGATAATTATTAGAGACCTAAAGCGCTTTCATCATTTCAAGG ATGGATTATGCTCATGTGGGGATTATTGGTGACATTATGCAAAGAAGCTTAGTTTGTGAT GCCATATTGGTAGTATCAGAATATCACAAATTGAGATAACTGTTTACGATACTCTCAGTG CATCTGTCCATCCAGGACACAAAGGCCAATACATCAGTGAGATAGTTTATAACTTCTCAA CCTGATTAGGATAAAATGGTCTGAACTACATAGCTAGCTGACGCAGTTGGTCAACTTATC TGTGGTGAAGATGAAGGACATTAGGGCTTTCAATAGTCCTGCACAATACACTTGCACTTT CATGTGCAAGACATGGATTTTTATCATGATATGAAGGGCTTGTAACATAATGGCTCAGCC TTGACCATTTGTAGAAGCAGCACAAAGTCATTTTGAAGTACATGGATTTCTGTGAGGATT AATTTTTTTAATATTTACTTGTGTTGAGAAATAGAAGGGAGTGGTGAGAGCTATCTCGTT GAAACACCAGGTTACGTGTTAGAAGCAGCATCTCCGCATTTGCAGTGGGAGGCTTGCCTC GGTTTATCCCTTCCCCTATCCTACTCATGTAGGAGCCTCCGACAGCAGGTCTGTCCCCTT TTTACATGTGATGACAAACACTGCACACTTCAGAAGCATGGATTTGTCAATCCCAGAAAT GTGCCCCAGAGAGTAAAATTGGGACATGACCATTTCTCAATATCAACTCTGTTCCATAAC ATCATAGAAGGTTTGTATGTTATTCTCATTTAAATGTACATTAATTAGTAACTAAAATTT TGATACTGTGGAGGAGTAAGGACTTAGATACCATTCCCCCCTGAAAACCATTTCAAACTG AGTTCATGCTTTAGAAATGAGGTTTTTAATTACTAATTGTTTTTTATAAAAGTAGTATGT GGTATCCAAGCCATCAACTAACTGAATAGTGGTCTTGTGGAAAGTGAGTGCTTATACATC CTTTTAAAGTGGATTGCATAGTTGTCATAATAAGGACAGTAGAATATAGCTAACCACATT GTATGCAATTTGACAAAAAAAAACTGTCTTCAATGGTCTTACATAACTGCATGTACTATA CCTATTTTTTCTGTAGCCACAATCCCATTGCTTAGCCCATGCCCTGTCAAACATGGCATG CCTGGAGGCGACAGGGATGTGCATACGAGGTGAACAGATCTGCTGGATGGTGCATCACAT GGAAGGCATGATTTCGACGTGGTCTCCCATTTACCAAATCAGCTGTCGACAGTTGGCACC ACTGTTCCTCCTCTTCCTCAAATTATCTGACCGAAGTAATCCAACAAAGAAGACAAGGGG TGTAGCAGAAACGGAGGGAGCACAGAGTACACGCTTGTGTTCAAGTGTTTGTCTCGGTGA TTTTGGTTAGGAGAAATGAAGAATAGGGGTGAAGGGTTTGATTTTGTGTTGTAGGGTTTT ATTTTTTTTCGGTTGCAAGGATCCAAGTTGAATTGTTAGAATTTGTACCGAGTTTCCTAT ATCTGTTGAATTAATAGGTGTATGTGGTATTCAATTAGGTCCCGTTTGTTCCTTTCATTT TGAGGAATTGAAATCTTACTAATAGAATAAGCTATTTTTTT