Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005135_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:160460364:160465842:1 gene:Zm00001d005135 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein kinase homolog4 description: protein kinase homolog4
Sequence	ATGGCTTCGACCTCCGTTCCTGAGTTAACCGCGGACAAGAAATGCGACAAAGCCATCGCG GATACGGCGGCACCACTTACTTCTCAGGGACACTCCGAAGAACCGACTGGGAAAGTCAGC ACACTAGTGCCTGCTTTGCCGGTTGTAATTGCAGCAGGCGATGGGGCTGCATCCAGTGGG GTGATAGAAAACAGAAATGGCATGGACAATTCTGCTGATGGTTCTTTGAAGCGGGATGAC AGTGAAGGTGCTGAGAAGAGCTCGCTGCGGGGGAGCGTCAAGGATAGCTCGGTGTCGGCT AAATGCAGTGACAGGGCGAGCAGCCTGTCGAAAGCCAGTGGGAGCGCCAAGATCAGCGGT CAACCTGCTGACATGATCGAGAGTGGCAAGAGTAGTCTCTATCGGGCCAGTGGTGGAAGT GATCTGAGTGATGAGAGCACCTGCAGTAGCATATGCAGCAGTGTCAGCAAGCCTCACAAG TCAAACGACTCAAAGTGGGAAGCGATTCAGGTTGTCCGAACCAAAGAAGGTTCTGTAGGT CTAGGTCATTTCAGGCTGCTCAAGAGGCTCGGTTGTGGTGATATTGGCAGTGTGTACTTA TCAGAACTTAGTGGCACTAAATGCTATTTTGCCATGAAGATCATGGACAAGGCGTCATTA GCAACCCGCAAAAAGCTGCTTAGAGCGCAGACTGAAAGGGAGATATTGCAATGCCTGGAT CATCCTTTTCTTCCAACATTGTACACTCACTTTGAGACGGATAAGTTCTCATGCTTGGTG ATGGAGTTCTGCCCTGGAGGTGACCTACATACCCTAAGGCAAAAGCAGCCTGGCAAGTAT TTCCCTGAACAAGCTGCCAAGTTTTATGTAGCAGAGGTGCTTCTTGCTCTGGAATACCTG CACATGCTTGGTATCATATACCGTGACTTAAAGCCAGAGAATGTTCTTGTGAGGGAAGAT GGACATATCATGCTGTCGGATTTCGATTTATCCCTCCGATGTGCTGTGAGCCCTACTCTT CTCAGATCTTCTAACCCCAGTGGGGATAACCAAAAGGGCAACCCAGCTTACTGTGTGCAG CCTGTGTGCATTGAGCCTGCCTGTATGCAGCCTTCTTGTGTCACGACAACCACATGCTTC TCTCCTCGCTTTTTCTCTTCCAAATCCAAGGAGAAAAAAGATAAAAAGGCAAAGGCAGAC TTGGCAAATCAGGTCAGACCACTTCCTGAGCTTGTTGCAGAGCCGACAGATGCAAGGTCT ATGTCTTTTGTTGGCACCCATGAGTACTTGGCACCTGAAATTATAAAGGGCGAGGGGCAT GGAAGTGCTGTAGACTGGTGGACATTTGGCATATTCTTGTATGAGCTTCTCTTCGGCAAG ACACCATTCAAAGGTTCTGGGAATAGGGCGACATTGTTCAACGTAGTTGGACAACCCTTA AGGTTCCCAGAATCACCTGTAGTGAGTTTTGCTGCAAGGGATCTTATTAGGGGATTGCTC ATCAAGGAACCTCAGCATCGATTAGCGTATAAGCGTGGAGCCACAGAAATAAAACAGCAC CCGTTCTTTGAAGGTGTTAATTGGGCATTAATCAGGTGTGCCACTCCACCTGATATCCCC AAGCCAGTTGAGATCCCTCGTTCTGTAGCTTCATCAAGCCAGAAGGCTACATCAGCCGCT GAGAAAGGCTCAGATTATCTTGAATTGGAGTTTTTTTAG

Peptide Sequence

PEP ID	Zm00001d005135_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:160460364:160465842:1 gene:Zm00001d005135 transcript:Zm00001d005135_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein kinase homolog4 description: protein kinase homolog4
Sequence	MASTSVPELTADKKCDKAIADTAAPLTSQGHSEEPTGKVSTLVPALPVVIAAGDGAASSG VIENRNGMDNSADGSLKRDDSEGAEKSSLRGSVKDSSVSAKCSDRASSLSKASGSAKISG QPADMIESGKSSLYRASGGSDLSDESTCSSICSSVSKPHKSNDSKWEAIQVVRTKEGSVG LGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKIMDKASLATRKKLLRAQTEREILQCLD HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAAKFYVAEVLLALEYL HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLLRSSNPSGDNQKGNPAYCVQ PVCIEPACMQPSCVTTTTCFSPRFFSSKSKEKKDKKAKADLANQVRPLPELVAEPTDARS MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL RFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIP KPVEIPRSVASSSQKATSAAEKGSDYLELEFF

Transcript Sequence

Transcript ID	Zm00001d005135_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:160460364:160465842:1 gene:Zm00001d005135 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein kinase homolog4 description: protein kinase homolog4
Sequence	CGCGTTCATTTCGCCCTTCCCATTCCTCTCCACTGCGCTGCCATCGTCTCGCGCCGGCCC CCCGTGGGGAACTAGAACTGACTCCCTCGATCCCAGCGGCAGCGGCGGAAGCGAACGGTG ACCGCGACCTCCCCTGAGGCTGCATATACTCGGATCGGGTTTCACATCTCCGGTTTTGGA TTGGTTGGTTGCCCGCGGCGATGGGAGGAGAGCTGTGGTGGTATCCATAGGGGATCCTCG GTTGCGTCCTTGTGCGATGGCTTCGACCTCCGTTCCTGAGTTAACCGCGGACAAGAAATG CGACAAAGCCATCGCGGATACGGCGGCACCACTTACTTCTCAGGGACACTCCGAAGAACC GACTGGGAAAGTCAGCACACTAGTGCCTGCTTTGCCGGTTGTAATTGCAGCAGGCGATGG GGCTGCATCCAGTGGGGTGATAGAAAACAGAAATGGCATGGACAATTCTGCTGATGGTTC TTTGAAGCGGGATGACAGTGAAGGTGCTGAGAAGAGCTCGCTGCGGGGGAGCGTCAAGGA TAGCTCGGTGTCGGCTAAATGCAGTGACAGGGCGAGCAGCCTGTCGAAAGCCAGTGGGAG CGCCAAGATCAGCGGTCAACCTGCTGACATGATCGAGAGTGGCAAGAGTAGTCTCTATCG GGCCAGTGGTGGAAGTGATCTGAGTGATGAGAGCACCTGCAGTAGCATATGCAGCAGTGT CAGCAAGCCTCACAAGTCAAACGACTCAAAGTGGGAAGCGATTCAGGTTGTCCGAACCAA AGAAGGTTCTGTAGGTCTAGGTCATTTCAGGCTGCTCAAGAGGCTCGGTTGTGGTGATAT TGGCAGTGTGTACTTATCAGAACTTAGTGGCACTAAATGCTATTTTGCCATGAAGATCAT GGACAAGGCGTCATTAGCAACCCGCAAAAAGCTGCTTAGAGCGCAGACTGAAAGGGAGAT ATTGCAATGCCTGGATCATCCTTTTCTTCCAACATTGTACACTCACTTTGAGACGGATAA GTTCTCATGCTTGGTGATGGAGTTCTGCCCTGGAGGTGACCTACATACCCTAAGGCAAAA GCAGCCTGGCAAGTATTTCCCTGAACAAGCTGCCAAGTTTTATGTAGCAGAGGTGCTTCT TGCTCTGGAATACCTGCACATGCTTGGTATCATATACCGTGACTTAAAGCCAGAGAATGT TCTTGTGAGGGAAGATGGACATATCATGCTGTCGGATTTCGATTTATCCCTCCGATGTGC TGTGAGCCCTACTCTTCTCAGATCTTCTAACCCCAGTGGGGATAACCAAAAGGGCAACCC AGCTTACTGTGTGCAGCCTGTGTGCATTGAGCCTGCCTGTATGCAGCCTTCTTGTGTCAC GACAACCACATGCTTCTCTCCTCGCTTTTTCTCTTCCAAATCCAAGGAGAAAAAAGATAA AAAGGCAAAGGCAGACTTGGCAAATCAGGTCAGACCACTTCCTGAGCTTGTTGCAGAGCC GACAGATGCAAGGTCTATGTCTTTTGTTGGCACCCATGAGTACTTGGCACCTGAAATTAT AAAGGGCGAGGGGCATGGAAGTGCTGTAGACTGGTGGACATTTGGCATATTCTTGTATGA GCTTCTCTTCGGCAAGACACCATTCAAAGGTTCTGGGAATAGGGCGACATTGTTCAACGT AGTTGGACAACCCTTAAGGTTCCCAGAATCACCTGTAGTGAGTTTTGCTGCAAGGGATCT TATTAGGGGATTGCTCATCAAGGAACCTCAGCATCGATTAGCGTATAAGCGTGGAGCCAC AGAAATAAAACAGCACCCGTTCTTTGAAGGTGTTAATTGGGCATTAATCAGGTGTGCCAC TCCACCTGATATCCCCAAGCCAGTTGAGATCCCTCGTTCTGTAGCTTCATCAAGCCAGAA GGCTACATCAGCCGCTGAGAAAGGCTCAGATTATCTTGAATTGGAGTTTTTTTAGTGGTC ACGCATGATCTCCCATGTGCAAGTTGTAAAGCTCTACCTTTTCCACTTAGACTTCTTTTT TTTATGGGTTTTAATAACTTTATATGTAGATGCATATTGTCGTACGTAGTGCTGTTCTCT TCAGTTGATTTCTCAGTTCATTCCTTTAGATGGGATCCTCAATCTGGTGGAGTCTGTAAT CCTTTATTGGCTGCCGTTCACTAGATTCTCTCAATAACATGGAAACATTTTCGTTCAATC GGTTTTGCAATTTGTATGGTGCACTGCATAGCTGAACACACCTTGATAGCATGGTAAATG CTACTTGTGGCAGTCGCATGTCACCTCAAGTCATTTATCCAACTGTCTTGTGTGGGAGGT ACGTTATGCAGCATGCAGTTTGAGCTTGCGCAGAAGTGCTAACAGT