Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005107_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:2:158547529:158561534:1 gene:Zm00001d005107 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 3
Sequence	ATGTCTGACATGGAGTCCGTCGCAGCTCTTATGAACTCGACAAGCTCCAAGATACAGCAG CTTCAGGAGGCATTTGCTGAGCTTGAGAGCCAGAGCACGGTTTCCATGAACCTCAAGTGG AAGCAGCTTGAAGACCACTTTCGTGGTCTTGAACAGTCCCTCAAGAAAAAGTTTGACGAG CTAAAAGAGCAGGAGAAGGAGTTCCAGGAGACTGTCGCAAAATCAGAGCAGATTCTGGAG CAGCGGGAGGCAGCTGTTGTGGCAAAGGAACTGACCTCTTTGGAGAAGTTGCAGGAGAAG AGGGAAGCTGCATTAGCTATGATCTTTAGCAAGTCCAGGCTTTCCTTACCTGTTCCTACC ATCAACCCAATGAACAAGGCGCTGAATAATCTTGGTGTCAAGTGGCCAAAACCGGCATCT GAGGAGAGTGTGCACTTGCAAGTTGATAATGCTGTAGTGACGCCTCGTTCTGAGCTTGTT GCACTCTGTGAGGAAATGAATGTGAAGGGGCTTCATAAGTTCATATCCGACAACAGGAAG AACTTGGCTGCCATCCGCGAGGAAATTCCCAGTGCACTGAAGAAAACATCTCATCCGTAT GGCTTGGTGTTGGATTCCCTGGAAGACTTCTATTCTGGAGATAATCTTGTATTAGATGGC AAAAAGGATGGGGACCTTCTGGGTGTTAGAAGGACGTGCCTGATGTTGTTGGAGTCACTC GGACAGTTGCACACTGCTGGTATAACTTGTTTCTCTTTGGAGGGTCACATGCTTACAACT AATATCATAGAGCGAGCAAAGAAGATTGCATTTGAGTGGAAGTCCAAGTTAGATAATCTT GAGATTGATGCTAGTAATGGGAACTGTCTTGAAGCTCATGCATTTCTTCAACTCCTGGCA ACCTTTGGTATTTCTGCTGAATATAATGAAGATGACCTGTGCAAATTGCTTCCATATGTC AGTCGTCGTCGTCAGACACCTGAACTTTGTCGATTGCTTGGGTTGTCACAGAAAATGCCA GGTGTCATTGAAGTTCTGGTGAAAAGTGGAAGAACTATTGATGCAATTAATTTAGCTTAC GTGTTTGAGCTTACTGAACAGTTTGAACCAGTGCAACTGCTTAAAGCATATCTGAGGGAT GTTAAGAAACTGTCACATGCCAGGAATGTCAAAATTTCTCCTGGAGCACAGAATGAGATG AATGAGCGTGAGTTGTGTGCACTGAAATCTGTCATTAAGTGCATTGAAGATCATAAACTT GAGGAGCAGTACCCTGTGGACCCACTTCAGAAAAGGGTTTTGCAGCTAGAGAAAGCAAAG GCAGACAAGAGGAGGGCTGTTGAAGCAGCCAAGCCACAGTCCAAGAGGCCTCGTGCCAAT GGATCGACCTTTGCACCCCGTGCTACAGGCTTTGCTGACAAGAGCTTCTACCCAGCAACC CCAGAGAGGCATCCCTCCAACCCTTACGAGAGGCAGTTTGTGTATGGTGCTGAGGCTCAT CTTCCTCCAATGATGAGTTCAGCGTCTTACCCGATGCAACCTGCCCATGGACCTTATTAC GGCAATGGCTACCCAGTACAGTACCAGGTCCCGTATATCCACTAA

Peptide Sequence

PEP ID	Zm00001d005107_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:2:158547529:158561534:1 gene:Zm00001d005107 transcript:Zm00001d005107_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 3
Sequence	MSDMESVAALMNSTSSKIQQLQEAFAELESQSTVSMNLKWKQLEDHFRGLEQSLKKKFDE LKEQEKEFQETVAKSEQILEQREAAVVAKELTSLEKLQEKREAALAMIFSKSRLSLPVPT INPMNKALNNLGVKWPKPASEESVHLQVDNAVVTPRSELVALCEEMNVKGLHKFISDNRK NLAAIREEIPSALKKTSHPYGLVLDSLEDFYSGDNLVLDGKKDGDLLGVRRTCLMLLESL GQLHTAGITCFSLEGHMLTTNIIERAKKIAFEWKSKLDNLEIDASNGNCLEAHAFLQLLA TFGISAEYNEDDLCKLLPYVSRRRQTPELCRLLGLSQKMPGVIEVLVKSGRTIDAINLAY VFELTEQFEPVQLLKAYLRDVKKLSHARNVKISPGAQNEMNERELCALKSVIKCIEDHKL EEQYPVDPLQKRVLQLEKAKADKRRAVEAAKPQSKRPRANGSTFAPRATGFADKSFYPAT PERHPSNPYERQFVYGAEAHLPPMMSSASYPMQPAHGPYYGNGYPVQYQVPYIH

Transcript Sequence

Transcript ID	Zm00001d005107_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:158547529:158561534:1 gene:Zm00001d005107 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 3
Sequence	GATTTTGGGTGTTTTCTTCTGTTTGGATTTATACCCTCTTCCGGATGAGGATTCGCCATG TCTGACATGGAGTCCGTCGCAGCTCTTATGAACTCGACAAGCTCCAAGATACAGCAGCTT CAGGAGGCATTTGCTGAGCTTGAGAGCCAGAGCACGGTTTCCATGAACCTCAAGTGGAAG CAGCTTGAAGACCACTTTCGTGGTCTTGAACAGTCCCTCAAGAAAAAGTTTGACGAGCTA AAAGAGCAGGAGAAGGAGTTCCAGGAGACTGTCGCAAAATCAGAGCAGATTCTGGAGCAG CGGGAGGCAGCTGTTGTGGCAAAGGAACTGACCTCTTTGGAGAAGTTGCAGGAGAAGAGG GAAGCTGCATTAGCTATGATCTTTAGCAAGTCCAGGCTTTCCTTACCTGTTCCTACCATC AACCCAATGAACAAGGCGCTGAATAATCTTGGTGTCAAGTGGCCAAAACCGGCATCTGAG GAGAGTGTGCACTTGCAAGTTGATAATGCTGTAGTGACGCCTCGTTCTGAGCTTGTTGCA CTCTGTGAGGAAATGAATGTGAAGGGGCTTCATAAGTTCATATCCGACAACAGGAAGAAC TTGGCTGCCATCCGCGAGGAAATTCCCAGTGCACTGAAGAAAACATCTCATCCGTATGGC TTGGTGTTGGATTCCCTGGAAGACTTCTATTCTGGAGATAATCTTGTATTAGATGGCAAA AAGGATGGGGACCTTCTGGGTGTTAGAAGGACGTGCCTGATGTTGTTGGAGTCACTCGGA CAGTTGCACACTGCTGGTATAACTTGTTTCTCTTTGGAGGGTCACATGCTTACAACTAAT ATCATAGAGCGAGCAAAGAAGATTGCATTTGAGTGGAAGTCCAAGTTAGATAATCTTGAG ATTGATGCTAGTAATGGGAACTGTCTTGAAGCTCATGCATTTCTTCAACTCCTGGCAACC TTTGGTATTTCTGCTGAATATAATGAAGATGACCTGTGCAAATTGCTTCCATATGTCAGT CGTCGTCGTCAGACACCTGAACTTTGTCGATTGCTTGGGTTGTCACAGAAAATGCCAGGT GTCATTGAAGTTCTGGTGAAAAGTGGAAGAACTATTGATGCAATTAATTTAGCTTACGTG TTTGAGCTTACTGAACAGTTTGAACCAGTGCAACTGCTTAAAGCATATCTGAGGGATGTT AAGAAACTGTCACATGCCAGGAATGTCAAAATTTCTCCTGGAGCACAGAATGAGATGAAT GAGCGTGAGTTGTGTGCACTGAAATCTGTCATTAAGTGCATTGAAGATCATAAACTTGAG GAGCAGTACCCTGTGGACCCACTTCAGAAAAGGGTTTTGCAGCTAGAGAAAGCAAAGGCA GACAAGAGGAGGGCTGTTGAAGCAGCCAAGCCACAGTCCAAGAGGCCTCGTGCCAATGGA TCGACCTTTGCACCCCGTGCTACAGGCTTTGCTGACAAGAGCTTCTACCCAGCAACCCCA GAGAGGCATCCCTCCAACCCTTACGAGAGGCAGTTTGTGTATGGTGCTGAGGCTCATCTT CCTCCAATGATGAGTTCAGCGTCTTACCCGATGCAACCTGCCCATGGACCTTATTACGGC AATGGCTACCCAGTACAGTACCAGGTCCCGTATATCCACTAATGGAGACAGCCAGGTGCA GGTGCTCTTTCCTAACTATCTAGCTTAGCCTGCTGCCCCTTGTTGTAGTCCTATCAGTTA CTCTGCTAGTTTGCCTAGATGGAAATAGTTGGACCACTCAATGTGTGTGCTCTGAGTGGC TGTTGTGAAATCTGTTAATTTTATGCCCTAATGACATGACATAAATTACTCCTAATACTT AGCTATCGATGAATCTCCCTATGTACTTTCATTCGGCTTGTGAAATG