Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005099_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:2:158134920:158139065:1 gene:Zm00001d005099 gene_biotype:protein_coding transcript_biotype:protein_coding description:mitochondrial substrate carrier family protein
Sequence

ATGTCCATGGCACCCGACCATCCCTTCGATGCCTTCGTCGCCGCAGCTCGTGGCGCCATA
ACCCACCTTCACCTTCCCGTCATCCACATCCCTGGATCCAATTCCAGTCCTAACCCCGAC
TCCAAGCAGCACCACGAACCCGAGGTCGACTGCCTGCTCCACCTCCACGTCGTCGTCACC
AACTTCTTCCACAAGCCCCTCAGATCATTCGCTAGGTGCTTCAGGCCCAAGCGACGGGCA
GGCAAACACTCCCCGCCGCTCTACCAGGAGCCCAGCAATGGCGCGACCCCGCAGCAGCAA
CTGGAGCTCCTGCTCTGCATTGCGTTCGATGCCTTCGCCCACAACCTCCACGCGCTGGAG
GACGCCTGCAAGCACAAAGGCGAGGAATTTGCTGTCGCTACCCGACAGTTGGAGCAATTT
GTGGTTTTCAGGAAGGTAATCGATGGGAAGAGGGCCGATTTCGATGGGTTCCTTTCAAAT
CTGGGCTTTGCAAAGGTTGGGCCACCGCCACCGCCAGCAAGCATCATGGGTGGTGCTTCC
CCTGTCCCAGCACCAGCACCAGTCAGCAATCAGGAGGATGGTGCTGTGATTGGGAACGGC
GAGAGGGTGGACATTGCTAGTGGTACACAACAGCAGGCACAAAAATTGCCTGCCCGGTTG
CTTAACATTCCTTTGTCGAATGTGGAGCGTCTGCGGTCTACGCTTTCTGCAGTTTCACTG
ACGGAGCTCATTGAATTAGTTCCGCAGCTGGTGAGCAGATCATCGACATCGGCAGATGCA
CATCCTGACAAGAAGAAGCTTTTCTCAGTGCAAGACTTCTTCAGATATGCGGAAATTGAA
GGAAAGCGATTCTTTGAAGAGTTAGACAGAGATGGTGATGGCCAAGTCACTCTAGAAGAT
CTCGAAATTGCAACGAGGAAGAGGCGGTTGCCAAGGAGGTATGCTCGAGAATTGTTCAGG
CGTACAAGAAGCAACTTCTTTTCGAAATCAATTGGGTGGAAGCAATTTTTATCCTTGATG
GAACAGAAGGAAGCAACCATTCTCCGAGCATATACCACGTTGTGTTTGAGCAAGTCTGGA
ACACTTCACAAGAATCAAATTTTGACTTCCTTGAAAGGTGCTGGACTTCCAGCCAATGAA
GATAATGCCGCTGCCATGCTACGGTATCTAAATGCTGATTCAGAAGGATCAATCTCATAT
GGCCATTTCCGCAACTTCATGCTTCTACTTCCTTCAGAACGCCTTGAGGATGATCCTCGG
AACATTTGGTTTGAAGCAGCCACCGTTGTTGCTGTATCCCCACCTATAGAAATATCTACA
GGAAGTGTTTTGAAGTCTGCTTTAGCTGGAGGTCTTGCAAGTGCTCTCTCTACCTCTCTG
CTGCATCCTATTGATTCAATGAAGACACGTGTCCAAGCATCTACACTCTCATTTCCCGAG
CTCATTTCAAAGCTTCCACAAATTGGACTTCGAGGATTGTATCGAGGTTCTATCCCAGCA
ATTCTCGGCCAGTTTTCAAGCCATGGTTTGAGGACAGGAATCTTTGAAGCAAGCAAGCTT
GTATTAATTAATGTCGCTCCAACACTTCCAGAGATTCAAGTGCAATCAATTGCATCCTTC
TGCAGCACAGTCTTAGGGACTGCAGTCCGTATCCCTTGTGAGGTTCTTAAGCAGCGATTG
CAGGCTGGAATATTCGACAATGTAGGGGAGGCGATTGTTGGCACCATGCGACGAGATGGC
CCAAAGGGATTTTTTCGTGGCACTGGGGCCACACTGTGTCGCGAGGTTCCTTTCTATGTT
GCTGGAATGTGCCTCTATGCAGAAGCTAAGAAGGCAGCACAGCATGTTTTGAGGAGAGAC
TTGGAAGCATGGGAAGTAGTGGCAGTTGGAGCATTGTCTGGAGGACTTGCGGCAATAGTG
ACCACTCCCTTTGACGTGATGAAGACTAGGATGATGACTGCCCCTCCAGGCACACCAGTG
TCTATGCAGATGATAATCTTGTCCATCCTTGGAAACGAGGGTCCACTTGGGCTCTTTAAG
GGCGCGATCCCCCGCTTCTTCTGGATTGCTCCTCTTGGAGCAATGAACTTTGCAGGCTAT
GAGCTTGCCAAGAAGGCAATGATAAAAGATGAGAAAAATTCCAGTGAGTCAACACGAGAG
ATCTTGCCAAGAAAGCAGTGA

Peptide Sequence

PEP ID

Zm00001d005099_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:2:158134920:158139065:1 gene:Zm00001d005099 transcript:Zm00001d005099_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:mitochondrial substrate carrier family protein
Sequence

MSMAPDHPFDAFVAAARGAITHLHLPVIHIPGSNSSPNPDSKQHHEPEVDCLLHLHVVVT
NFFHKPLRSFARCFRPKRRAGKHSPPLYQEPSNGATPQQQLELLLCIAFDAFAHNLHALE
DACKHKGEEFAVATRQLEQFVVFRKVIDGKRADFDGFLSNLGFAKVGPPPPPASIMGGAS
PVPAPAPVSNQEDGAVIGNGERVDIASGTQQQAQKLPARLLNIPLSNVERLRSTLSAVSL
TELIELVPQLVSRSSTSADAHPDKKKLFSVQDFFRYAEIEGKRFFEELDRDGDGQVTLED
LEIATRKRRLPRRYARELFRRTRSNFFSKSIGWKQFLSLMEQKEATILRAYTTLCLSKSG
TLHKNQILTSLKGAGLPANEDNAAAMLRYLNADSEGSISYGHFRNFMLLLPSERLEDDPR
NIWFEAATVVAVSPPIEISTGSVLKSALAGGLASALSTSLLHPIDSMKTRVQASTLSFPE
LISKLPQIGLRGLYRGSIPAILGQFSSHGLRTGIFEASKLVLINVAPTLPEIQVQSIASF
CSTVLGTAVRIPCEVLKQRLQAGIFDNVGEAIVGTMRRDGPKGFFRGTGATLCREVPFYV
AGMCLYAEAKKAAQHVLRRDLEAWEVVAVGALSGGLAAIVTTPFDVMKTRMMTAPPGTPV
SMQMIILSILGNEGPLGLFKGAIPRFFWIAPLGAMNFAGYELAKKAMIKDEKNSSESTRE
ILPRKQ

Transcript Sequence

Transcript ID

Zm00001d005099_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:158134920:158139065:1 gene:Zm00001d005099 gene_biotype:protein_coding transcript_biotype:protein_coding description:mitochondrial substrate carrier family protein
Sequence

AACTCCACCTCGGCCCTCTCATCCTCGTCACCACCGGCCACGGCCGGCCTCCACCGCTGC
CTGCCCACCGCTCGCTACACTCATCTCCCCAAAGTGGAAGAAGAATCGGGCTGTTGCTCA
CTCGTACCCTCTAAGTGAGGCGGGCCTCACCAACCTTGCTGCTATGCCTTCCACGACGCT
CGCTGCAGTCCACCACCACCGGACAGGAAGCACCACCTAGTTCCTGACCCTGATGTCCAT
GGCACCCGACCATCCCTTCGATGCCTTCGTCGCCGCAGCTCGTGGCGCCATAACCCACCT
TCACCTTCCCGTCATCCACATCCCTGGATCCAATTCCAGTCCTAACCCCGACTCCAAGCA
GCACCACGAACCCGAGGTCGACTGCCTGCTCCACCTCCACGTCGTCGTCACCAACTTCTT
CCACAAGCCCCTCAGATCATTCGCTAGGTGCTTCAGGCCCAAGCGACGGGCAGGCAAACA
CTCCCCGCCGCTCTACCAGGAGCCCAGCAATGGCGCGACCCCGCAGCAGCAACTGGAGCT
CCTGCTCTGCATTGCGTTCGATGCCTTCGCCCACAACCTCCACGCGCTGGAGGACGCCTG
CAAGCACAAAGGCGAGGAATTTGCTGTCGCTACCCGACAGTTGGAGCAATTTGTGGTTTT
CAGGAAGGTAATCGATGGGAAGAGGGCCGATTTCGATGGGTTCCTTTCAAATCTGGGCTT
TGCAAAGGTTGGGCCACCGCCACCGCCAGCAAGCATCATGGGTGGTGCTTCCCCTGTCCC
AGCACCAGCACCAGTCAGCAATCAGGAGGATGGTGCTGTGATTGGGAACGGCGAGAGGGT
GGACATTGCTAGTGGTACACAACAGCAGGCACAAAAATTGCCTGCCCGGTTGCTTAACAT
TCCTTTGTCGAATGTGGAGCGTCTGCGGTCTACGCTTTCTGCAGTTTCACTGACGGAGCT
CATTGAATTAGTTCCGCAGCTGGTGAGCAGATCATCGACATCGGCAGATGCACATCCTGA
CAAGAAGAAGCTTTTCTCAGTGCAAGACTTCTTCAGATATGCGGAAATTGAAGGAAAGCG
ATTCTTTGAAGAGTTAGACAGAGATGGTGATGGCCAAGTCACTCTAGAAGATCTCGAAAT
TGCAACGAGGAAGAGGCGGTTGCCAAGGAGGTATGCTCGAGAATTGTTCAGGCGTACAAG
AAGCAACTTCTTTTCGAAATCAATTGGGTGGAAGCAATTTTTATCCTTGATGGAACAGAA
GGAAGCAACCATTCTCCGAGCATATACCACGTTGTGTTTGAGCAAGTCTGGAACACTTCA
CAAGAATCAAATTTTGACTTCCTTGAAAGGTGCTGGACTTCCAGCCAATGAAGATAATGC
CGCTGCCATGCTACGGTATCTAAATGCTGATTCAGAAGGATCAATCTCATATGGCCATTT
CCGCAACTTCATGCTTCTACTTCCTTCAGAACGCCTTGAGGATGATCCTCGGAACATTTG
GTTTGAAGCAGCCACCGTTGTTGCTGTATCCCCACCTATAGAAATATCTACAGGAAGTGT
TTTGAAGTCTGCTTTAGCTGGAGGTCTTGCAAGTGCTCTCTCTACCTCTCTGCTGCATCC
TATTGATTCAATGAAGACACGTGTCCAAGCATCTACACTCTCATTTCCCGAGCTCATTTC
AAAGCTTCCACAAATTGGACTTCGAGGATTGTATCGAGGTTCTATCCCAGCAATTCTCGG
CCAGTTTTCAAGCCATGGTTTGAGGACAGGAATCTTTGAAGCAAGCAAGCTTGTATTAAT
TAATGTCGCTCCAACACTTCCAGAGATTCAAGTGCAATCAATTGCATCCTTCTGCAGCAC
AGTCTTAGGGACTGCAGTCCGTATCCCTTGTGAGGTTCTTAAGCAGCGATTGCAGGCTGG
AATATTCGACAATGTAGGGGAGGCGATTGTTGGCACCATGCGACGAGATGGCCCAAAGGG
ATTTTTTCGTGGCACTGGGGCCACACTGTGTCGCGAGGTTCCTTTCTATGTTGCTGGAAT
GTGCCTCTATGCAGAAGCTAAGAAGGCAGCACAGCATGTTTTGAGGAGAGACTTGGAAGC
ATGGGAAGTAGTGGCAGTTGGAGCATTGTCTGGAGGACTTGCGGCAATAGTGACCACTCC
CTTTGACGTGATGAAGACTAGGATGATGACTGCCCCTCCAGGCACACCAGTGTCTATGCA
GATGATAATCTTGTCCATCCTTGGAAACGAGGGTCCACTTGGGCTCTTTAAGGGCGCGAT
CCCCCGCTTCTTCTGGATTGCTCCTCTTGGAGCAATGAACTTTGCAGGCTATGAGCTTGC
CAAGAAGGCAATGATAAAAGATGAGAAAAATTCCAGTGAGTCAACACGAGAGATCTTGCC
AAGAAAGCAGTGATCAACCATG