Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005089_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:2:157768479:157770347:1 gene:Zm00001d005089 gene_biotype:protein_coding transcript_biotype:protein_coding description:mRNA turnover protein 4

Sequence

ATGCCCAAGTCCAAGCGCAACCGCCCAGTGACCTTATCGAAGACCAAGAAGAAGCCAGGT
TTGGAGCGCAAGGGCAAAGTAGTCGCCGAGATAAAAGATGCCGTGGACAAGTACAGCAGC
GCCTATGTTTTTACCTACGATAACATGAGGAATCAGAAGCTCAAGGACCTCAGGGAGCAG
CTCAAGTCTTCTAGCAGGCACGGCGCCCACATTGCATGTCTGTTGATTCCGTCTTCTGCT
TTGGTCAAATCCATCTTACCCTTCCAAGCAATATTTTTCTGTTCCAGGATATTTCTCGCT
GGGAAGAAGTTCCTTCAAGGCAACTCTGGTCTGTTATTCACCAATCTTCCAAGGGATGAT
GTTGAGAGGATGTTTCGAGAATTTGAGGAGCATGATTTTGCAAGGACAGGAAGTACTGCG
GCAGATACGGTTGAGCTTAAGGAAGGCCCTCTGGAACAGTTCACACATGAGATGGAGCCA
TTTCTACGCAAGCAAGGACTTCCAGTTCGCTTGAACAAAGGTGTCGTAGAGTTAGTTGCA
GACCATGTAGTTTGTGAGGAAGGAAAGCCCCTTTCGCCAGAAGCAGCACAGATTCTGCGG
CTGCTTGGGATACAGATGGCGACATTCCGTCTATACCTTGTATGTCGCTGGTCGAGCGAT
GAATTTGAAGCTTACAAAGAAGGCTTGATGCACCTAGGAGCTGATGATTCCTCTTAA

Peptide Sequence

PEP ID

Zm00001d005089_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:2:157768479:157770347:1 gene:Zm00001d005089 transcript:Zm00001d005089_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:mRNA turnover protein 4

Sequence

MPKSKRNRPVTLSKTKKKPGLERKGKVVAEIKDAVDKYSSAYVFTYDNMRNQKLKDLREQ
LKSSSRHGAHIACLLIPSSALVKSILPFQAIFFCSRIFLAGKKFLQGNSGLLFTNLPRDD
VERMFREFEEHDFARTGSTAADTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVA
DHVVCEEGKPLSPEAAQILRLLGIQMATFRLYLVCRWSSDEFEAYKEGLMHLGADDSS

Transcript Sequence

Transcript ID

Zm00001d005089_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:157768479:157770347:1 gene:Zm00001d005089 gene_biotype:protein_coding transcript_biotype:protein_coding description:mRNA turnover protein 4

Sequence

ATGCCCAAGTCCAAGCGCAACCGCCCAGTGACCTTATCGAAGACCAAGAAGAAGCCAGGT
TTGGAGCGCAAGGGCAAAGTAGTCGCCGAGATAAAAGATGCCGTGGACAAGTACAGCAGC
GCCTATGTTTTTACCTACGATAACATGAGGAATCAGAAGCTCAAGGACCTCAGGGAGCAG
CTCAAGTCTTCTAGCAGGCACGGCGCCCACATTGCATGTCTGTTGATTCCGTCTTCTGCT
TTGGTCAAATCCATCTTACCCTTCCAAGCAATATTTTTCTGTTCCAGGATATTTCTCGCT
GGGAAGAAGTTCCTTCAAGGCAACTCTGGTCTGTTATTCACCAATCTTCCAAGGGATGAT
GTTGAGAGGATGTTTCGAGAATTTGAGGAGCATGATTTTGCAAGGACAGGAAGTACTGCG
GCAGATACGGTTGAGCTTAAGGAAGGCCCTCTGGAACAGTTCACACATGAGATGGAGCCA
TTTCTACGCAAGCAAGGACTTCCAGTTCGCTTGAACAAAGGTGTCGTAGAGTTAGTTGCA
GACCATGTAGTTTGTGAGGAAGGAAAGCCCCTTTCGCCAGAAGCAGCACAGATTCTGCGG
CTGCTTGGGATACAGATGGCGACATTCCGTCTATACCTTGTATGTCGCTGGTCGAGCGAT
GAATTTGAAGCTTACAAAGAAGGCTTGATGCACCTAGGAGCTGATGATTCCTCTTAAGCT
TGTGTTTCGTGTATACACAACACAAAGGGAGCACTTGCTGTCTTGGCTGGGTTGGAAACT
AGAAAGATGCTGTCTGCAGAAAAATTTTGCTAGTGTATTTCTGAGATTCAGTGGGGGGTT
TTGTATGTGCGACGCGGTGCTGAACCTAAAGAAACTGTTTGGATTCAGGTTTCTGAGTTG
GGTTTACTTGTTCAAAC