Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005062_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:156883275:156887322:-1 gene:Zm00001d005062 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-sorting receptor 1
Sequence

ATGGGCTCCCGATTCGCCAGCGCGGCGCTGCGGCTGCTGGTGTGCGCAGCGCTCCTGCTG
GGTTGCTGCCACGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGGCGCCCGAC
GACCTCAAGGGCACCTACGAGTGCGCCATTGGTAACTTCGGGGTGCCCCAGTACGGCGGC
ACCATGGTCGGCTTCGTCGCCTACCCCAAGGCCAACAGGAAGGCCTGCAAGAGCTTCGAC
GACTTTGACATCTCCTACAAGGCCAAGCCGGGGGCGTTCCCCACCTTCTTGCTCGTCGAC
AGGGGAGATTGCTACTTTGCAAAGAAGGCATGGAATGCACAGAAAGCAGGAGCAGCAGCA
ATCCTTGTCGCTGATGACAAAGATGAACCTCTAATTACAATGGACAACCCTGAGGAGAGT
GGCAACACAGATTATCTAGAGAACATCACTATTCCTTCGGCATTAATAACCAAGAGTTTT
GGGGACAAGCTCAAGAAAGTAATTGACAACGGTGACATGGTTAGTGTGAATTTGGATTGG
AGAGAGGCCCTGCCCCATCCTGATGAGCGTGTTGAGTATGAATTTTGGACCAACAGCAAC
GATGAATGTGGCCTGAAGTGCGATAGCCAGATTGATTTTGTCAAGAGCTTCAAAGGAGCA
GCACAAGTACTTGAGAAGAAGGGCTATACAGAGTTCACTCCTCATTACATTACCTGGTAT
TGCCCAGAGGCCTTCATTCTGAGCAAGCAGTGCAAGTCTCAGTGCATCAATCATGGGAGA
TACTGTGCACCTGACCCGGAACAGGATTTTAGCAAAGGATATGATGGTAAAGATGTGGTG
GTCCAGAACTTGCGCCAAGTTTGTGTCTTTAAGGTTGCTAAGGAGCACAAGAAGCCTTGG
TTATGGTGGGACTATGTTACTGATTTTGCGATTCGGTGTCCAATGAAGGAAAAGAAGTAC
ACAAAGGAGTGTGCTGATGGTGTTATCAAGTCTCTTGGCCTTGATCATAAAGCAATAGAT
AAATGTATTGGTGATCCAGATGCTGATGAAGAAAACCCTGTTCTGAAAGCTGAACAGGAT
GCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCAACTCTGGTAATTAAC
AATAGACAATACAGAGGTAAGCTTGACAAAGGAGCAGTTCTTAAAGCACTTTGTGCTGGT
TTTAAGGAAACTACTGAGCCAGCCGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGC
CTAGAGAACAATGGTGGCTGTTGGCAAGATAAGGCTGCTAACATCACTGCATGCAAGGAT
ACTTTCCGTGGAAGAGTTTGCGAGTGTCCAATTGTGAAAGGAGTAAAATTTGTTGGTGAT
GGCTATAGTCATTGTGAAGCTTCCGGATCTGGGCGATGTGAAATTAACAATGGAGGATGC
TGGAAAGATACCAAGAATGGTCGGACATACTCTGCCTGTAATGATGATGGCTGCAAATGC
CCAGATGGATTCAAGGGTGACGGTAGGCACAAATGTGAAGATATTGATGAGTGTAAGGAA
AGGACTGTGTGTCAATGCAAAGAATGCAAATGCAAAAACACATGGGGAAGCTATGAGTGT
GGCTGCAGTGGAGGCTTGCTTTACATGAAGGAGCATGATACATGCATAAGCAAAAGTGGA
GCATCAGAAGCAGGTTGGGGCTTCTTGTGGGTCATCTTCTTTGGCCTTGTTGCAGCAGGA
GTTGCAGGATATGCTGTGTACAAGTACAGGATCCGGAGGTACATGGACTCAGAGATCCGT
GCCATCATGGCTCAGTACATGCCCCTGGACAACCAAGGAGACGTTCAGAGCCATTCTCAT
CACATTGAGATGTGA

Peptide Sequence

PEP ID

Zm00001d005062_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:156883275:156887322:-1 gene:Zm00001d005062 transcript:Zm00001d005062_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-sorting receptor 1
Sequence

MGSRFASAALRLLVCAALLLGCCHGRFVVEKNSLKVTAPDDLKGTYECAIGNFGVPQYGG
TMVGFVAYPKANRKACKSFDDFDISYKAKPGAFPTFLLVDRGDCYFAKKAWNAQKAGAAA
ILVADDKDEPLITMDNPEESGNTDYLENITIPSALITKSFGDKLKKVIDNGDMVSVNLDW
REALPHPDERVEYEFWTNSNDECGLKCDSQIDFVKSFKGAAQVLEKKGYTEFTPHYITWY
CPEAFILSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLRQVCVFKVAKEHKKPW
LWWDYVTDFAIRCPMKEKKYTKECADGVIKSLGLDHKAIDKCIGDPDADEENPVLKAEQD
AQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKALCAGFKETTEPAVCLSEDIQTNEC
LENNGGCWQDKAANITACKDTFRGRVCECPIVKGVKFVGDGYSHCEASGSGRCEINNGGC
WKDTKNGRTYSACNDDGCKCPDGFKGDGRHKCEDIDECKERTVCQCKECKCKNTWGSYEC
GCSGGLLYMKEHDTCISKSGASEAGWGFLWVIFFGLVAAGVAGYAVYKYRIRRYMDSEIR
AIMAQYMPLDNQGDVQSHSHHIEM

Transcript Sequence

Transcript ID

Zm00001d005062_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:156883275:156887322:-1 gene:Zm00001d005062 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-sorting receptor 1
Sequence

ATCTCGTCTAGCCCCGGAAAATCTCTCCCACTCCAACTGGTCCATCCGAGCATTGTAGAA
CTCTCTCCAACTCCAACGCCCTACCCCGGCCGTCAAAATTCCATCTTTCCGCCGTTTTCG
GGGCCGCACGGCTGCAAGATCGATCAATCTTGCGCCGATCGAGCCGCAGACACAACCAGT
TCCGATCCCCAGCCGGTGCTCGCGGACCGCAGGCGGAGCCCGGACGGAGCATGGGCTCCC
GATTCGCCAGCGCGGCGCTGCGGCTGCTGGTGTGCGCAGCGCTCCTGCTGGGTTGCTGCC
ACGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGGCGCCCGACGACCTCAAGG
GCACCTACGAGTGCGCCATTGGTAACTTCGGGGTGCCCCAGTACGGCGGCACCATGGTCG
GCTTCGTCGCCTACCCCAAGGCCAACAGGAAGGCCTGCAAGAGCTTCGACGACTTTGACA
TCTCCTACAAGGCCAAGCCGGGGGCGTTCCCCACCTTCTTGCTCGTCGACAGGGGAGATT
GCTACTTTGCAAAGAAGGCATGGAATGCACAGAAAGCAGGAGCAGCAGCAATCCTTGTCG
CTGATGACAAAGATGAACCTCTAATTACAATGGACAACCCTGAGGAGAGTGGCAACACAG
ATTATCTAGAGAACATCACTATTCCTTCGGCATTAATAACCAAGAGTTTTGGGGACAAGC
TCAAGAAAGTAATTGACAACGGTGACATGGTTAGTGTGAATTTGGATTGGAGAGAGGCCC
TGCCCCATCCTGATGAGCGTGTTGAGTATGAATTTTGGACCAACAGCAACGATGAATGTG
GCCTGAAGTGCGATAGCCAGATTGATTTTGTCAAGAGCTTCAAAGGAGCAGCACAAGTAC
TTGAGAAGAAGGGCTATACAGAGTTCACTCCTCATTACATTACCTGGTATTGCCCAGAGG
CCTTCATTCTGAGCAAGCAGTGCAAGTCTCAGTGCATCAATCATGGGAGATACTGTGCAC
CTGACCCGGAACAGGATTTTAGCAAAGGATATGATGGTAAAGATGTGGTGGTCCAGAACT
TGCGCCAAGTTTGTGTCTTTAAGGTTGCTAAGGAGCACAAGAAGCCTTGGTTATGGTGGG
ACTATGTTACTGATTTTGCGATTCGGTGTCCAATGAAGGAAAAGAAGTACACAAAGGAGT
GTGCTGATGGTGTTATCAAGTCTCTTGGCCTTGATCATAAAGCAATAGATAAATGTATTG
GTGATCCAGATGCTGATGAAGAAAACCCTGTTCTGAAAGCTGAACAGGATGCACAGATTG
GCAAGGGCTCTCGTGGTGATGTTACCATCTTACCAACTCTGGTAATTAACAATAGACAAT
ACAGAGGTAAGCTTGACAAAGGAGCAGTTCTTAAAGCACTTTGTGCTGGTTTTAAGGAAA
CTACTGAGCCAGCCGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCCTAGAGAACA
ATGGTGGCTGTTGGCAAGATAAGGCTGCTAACATCACTGCATGCAAGGATACTTTCCGTG
GAAGAGTTTGCGAGTGTCCAATTGTGAAAGGAGTAAAATTTGTTGGTGATGGCTATAGTC
ATTGTGAAGCTTCCGGATCTGGGCGATGTGAAATTAACAATGGAGGATGCTGGAAAGATA
CCAAGAATGGTCGGACATACTCTGCCTGTAATGATGATGGCTGCAAATGCCCAGATGGAT
TCAAGGGTGACGGTAGGCACAAATGTGAAGATATTGATGAGTGTAAGGAAAGGACTGTGT
GTCAATGCAAAGAATGCAAATGCAAAAACACATGGGGAAGCTATGAGTGTGGCTGCAGTG
GAGGCTTGCTTTACATGAAGGAGCATGATACATGCATAAGCAAAAGTGGAGCATCAGAAG
CAGGTTGGGGCTTCTTGTGGGTCATCTTCTTTGGCCTTGTTGCAGCAGGAGTTGCAGGAT
ATGCTGTGTACAAGTACAGGATCCGGAGGTACATGGACTCAGAGATCCGTGCCATCATGG
CTCAGTACATGCCCCTGGACAACCAAGGAGACGTTCAGAGCCATTCTCATCACATTGAGA
TGTGAGGACAGGAGGATGCAGACTTGACGAAGGGGGGGGGGGGGGGGGGGGGGGGGCGAC
TTGATGTAGCCTATATATACACTTGAATTAGATGTTCATAACTGTAACGATCTTATGTTT
AGCATGCTTAGTCCTTGAACAATCTGTATCCCTGTGGTTTCTGTGTTAAGGCTGACACGG
TCTTGTTTAGTAATAATTGCCATCTTTTCTTTCGGTGCCAATAAAGTAGGTGGCAAGACG
GGGATGAGTGGTGTTGAGTTATGTTTGTGGTC