Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005051_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:156270103:156272641:1 gene:Zm00001d005051 gene_biotype:protein_coding transcript_biotype:protein_coding description:Root phototropism protein 2
Sequence	ATGGCTGCTGCTTCTTCCTCCATGGACAGGATCGCCCAGTGGGTGTCGTCCCAGGAGGTC CCGACCGACCTCACCGTCCGCATCGCCGACTCCGTCTTCTCTCTCCACAAGGCGGTGATG GTGCCCAAGTGCGGCTACATCCGCCGGGCCGTGGCGGCGAGCCAGACGCAGGGCCCGGGG GGCGGCGCCGTCGAGCTGGACCTCTCCGCGCTGCCGGGCGGCGCTGACGCCTTCCAGAAG GCGGCGCGCTGCTGCTACGGCGACAGCCTCGAGATCACGGCGCGCGACGCGGCGGCACTC CGCTGCGCCGCGGAGTTCCTCGACGCGCCGGACCTGGCCCGCCGCGCCGACGACTTCCTC GCGCAGGCCGCGCTGCGCGCGCTCCCCGGCGCCGCCGCCGTCCTGCGGTCCTGCGAGGCG CTGCTCCCGGCCGCCGACGAGCTCGGCGTCGCGCGCCGCGCCGCGGACGCCGTCGCGCTC GGGGTCTGCAACGAGGCGCTGTTCCCGACGCCGCGGGCGCCGCCCGGGTGGTGGGCGGCC GAGCTGGCGGCGCTGTCGCCGGCGTCGTTCCGGAGGGTGGTCGCGGCGCTGCGGTGCCGC CGGGCCGGGCCCGAGGTGGTGGCCGCCGCGGCCGCCGCGTACGCGGAGCGCGTCCTGGCC GGGGTCCTCGCGGCGCCCGGCCGCCGGGACGCGGACCAGCGCGCGCTGCTGGAGGCCGTC GTGGACGCGCTGCCTCCCGCCGCCGACGCGCCCCTCCCGGCCGCCTTCCTCTGCCGCCTC CTCCGCGCCGCGGTCACCGCCGAGGCGTCCGCCAAGACGTGCCGCGACATGGAGCTCCGC GTCGCGGCCGTGCTGGACCAGGCCACCGCGGGGGACCTGCTGGGCGTCGCGCTCGACGGC GCCGGGGAGCGCGTCGTCAACGCGGACACCGTCCGCCGCGTCGTCGCCGCGTGCGTCGAG CGCCAGCAGACGCAGCAGGGCCGGCGGGCGTCCCTGGCCGGAGGTCCGGCAGGTGAGCTC AGCGCGCTGGAGAAGGTGGCGAAGACGGTGGATGAGGTGGCGGCGGAGATGGCGTCGCAC GAGTCGCTGCCTATCTCCAAGTTCGTGGGCGTGGCGGGCGCGGTGCCCAGGGACGCGCGC CCGTCGCACGACTGCCTGTACCGCGCCGTGGACATCTACCTCAAGACACACCCGGGGCTG GACGAGATCGAGCGGGAGAAGGTGTGCAGCGTCATGGACCCGCTCAGGCTGTCGTACCAG GCGCGGATGCACGCGTCGCAGAACAAGCGGCTGCCGCTGCAGGCCGTGCTCAGCGTGCTC TACTACGACCAGCTGAAGATCCGTAGCGCGGACGGCAGCGGCGGCACGGAGGAAGGGTGG GAGACACAGTCGGCCGCCGGGAAGGCCCGTGCGCAGGCGCGGGCGGACGTGTCGCTGGCA AGGGAGAACGAGGCGCTGCGGTTGGAGCTGGCGCGGATGCGAGCGTACGTGTCAGGGATG CAGCAGAGCAGCAAGGGGAGCGGGTCGAGGCCATCGTCGTCATCGCTGGTACCAGGCCCA GCGACGGCGACGGGGAAGAAGGCAAGCTTCTTAGGGTCGGTGTCGCGGACGTTGAGCCGG CTGAACCCGTTTAAGGGCGGGTGGGCCAAGGACACGACCAGCATTGCCGATGGGCGTGAC AGGACTTCCATGCATGTGGTGAAGCCCAAGAGGAGGAGGTTCTCCATCGGCTAA

Peptide Sequence

PEP ID	Zm00001d005051_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:156270103:156272641:1 gene:Zm00001d005051 transcript:Zm00001d005051_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Root phototropism protein 2
Sequence	MAAASSSMDRIAQWVSSQEVPTDLTVRIADSVFSLHKAVMVPKCGYIRRAVAASQTQGPG GGAVELDLSALPGGADAFQKAARCCYGDSLEITARDAAALRCAAEFLDAPDLARRADDFL AQAALRALPGAAAVLRSCEALLPAADELGVARRAADAVALGVCNEALFPTPRAPPGWWAA ELAALSPASFRRVVAALRCRRAGPEVVAAAAAAYAERVLAGVLAAPGRRDADQRALLEAV VDALPPAADAPLPAAFLCRLLRAAVTAEASAKTCRDMELRVAAVLDQATAGDLLGVALDG AGERVVNADTVRRVVAACVERQQTQQGRRASLAGGPAGELSALEKVAKTVDEVAAEMASH ESLPISKFVGVAGAVPRDARPSHDCLYRAVDIYLKTHPGLDEIEREKVCSVMDPLRLSYQ ARMHASQNKRLPLQAVLSVLYYDQLKIRSADGSGGTEEGWETQSAAGKARAQARADVSLA RENEALRLELARMRAYVSGMQQSSKGSGSRPSSSSLVPGPATATGKKASFLGSVSRTLSR LNPFKGGWAKDTTSIADGRDRTSMHVVKPKRRRFSIG

Transcript Sequence

Transcript ID	Zm00001d005051_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:156270103:156272641:1 gene:Zm00001d005051 gene_biotype:protein_coding transcript_biotype:protein_coding description:Root phototropism protein 2
Sequence	CTCAGCTAGTCGTCGTCGACCCCCCCGAAATCAGATAAACACCAGCCACGCAAAAAATCG CCGTATCCAGTCAGATCTTCCTCCTCCCAAATCCATCGCTAGCCAGCCTGCTGCTAGCAC GCACAGTACCACACAGTACGTGCTCAAATAATGCTCGCTCCTGGCCTCCTGCTACCAAGG ACCAAGAAAAGGAGGGCCGGCGAGGACGTCTGGCCGTCTGGGTCCCTATATATGAGACAG CGAGGAGGTGGGTGTGAAGGCTGTGCCCAGTGAGCTCAGCTCGATCCATCGATCGGAGAG CTTTTGCACTGCACCAGCTCTGAAGCCATGGCTGCTGCTTCTTCCTCCATGGACAGGATC GCCCAGTGGGTGTCGTCCCAGGAGGTCCCGACCGACCTCACCGTCCGCATCGCCGACTCC GTCTTCTCTCTCCACAAGGCGGTGATGGTGCCCAAGTGCGGCTACATCCGCCGGGCCGTG GCGGCGAGCCAGACGCAGGGCCCGGGGGGCGGCGCCGTCGAGCTGGACCTCTCCGCGCTG CCGGGCGGCGCTGACGCCTTCCAGAAGGCGGCGCGCTGCTGCTACGGCGACAGCCTCGAG ATCACGGCGCGCGACGCGGCGGCACTCCGCTGCGCCGCGGAGTTCCTCGACGCGCCGGAC CTGGCCCGCCGCGCCGACGACTTCCTCGCGCAGGCCGCGCTGCGCGCGCTCCCCGGCGCC GCCGCCGTCCTGCGGTCCTGCGAGGCGCTGCTCCCGGCCGCCGACGAGCTCGGCGTCGCG CGCCGCGCCGCGGACGCCGTCGCGCTCGGGGTCTGCAACGAGGCGCTGTTCCCGACGCCG CGGGCGCCGCCCGGGTGGTGGGCGGCCGAGCTGGCGGCGCTGTCGCCGGCGTCGTTCCGG AGGGTGGTCGCGGCGCTGCGGTGCCGCCGGGCCGGGCCCGAGGTGGTGGCCGCCGCGGCC GCCGCGTACGCGGAGCGCGTCCTGGCCGGGGTCCTCGCGGCGCCCGGCCGCCGGGACGCG GACCAGCGCGCGCTGCTGGAGGCCGTCGTGGACGCGCTGCCTCCCGCCGCCGACGCGCCC CTCCCGGCCGCCTTCCTCTGCCGCCTCCTCCGCGCCGCGGTCACCGCCGAGGCGTCCGCC AAGACGTGCCGCGACATGGAGCTCCGCGTCGCGGCCGTGCTGGACCAGGCCACCGCGGGG GACCTGCTGGGCGTCGCGCTCGACGGCGCCGGGGAGCGCGTCGTCAACGCGGACACCGTC CGCCGCGTCGTCGCCGCGTGCGTCGAGCGCCAGCAGACGCAGCAGGGCCGGCGGGCGTCC CTGGCCGGAGGTCCGGCAGGTGAGCTCAGCGCGCTGGAGAAGGTGGCGAAGACGGTGGAT GAGGTGGCGGCGGAGATGGCGTCGCACGAGTCGCTGCCTATCTCCAAGTTCGTGGGCGTG GCGGGCGCGGTGCCCAGGGACGCGCGCCCGTCGCACGACTGCCTGTACCGCGCCGTGGAC ATCTACCTCAAGACACACCCGGGGCTGGACGAGATCGAGCGGGAGAAGGTGTGCAGCGTC ATGGACCCGCTCAGGCTGTCGTACCAGGCGCGGATGCACGCGTCGCAGAACAAGCGGCTG CCGCTGCAGGCCGTGCTCAGCGTGCTCTACTACGACCAGCTGAAGATCCGTAGCGCGGAC GGCAGCGGCGGCACGGAGGAAGGGTGGGAGACACAGTCGGCCGCCGGGAAGGCCCGTGCG CAGGCGCGGGCGGACGTGTCGCTGGCAAGGGAGAACGAGGCGCTGCGGTTGGAGCTGGCG CGGATGCGAGCGTACGTGTCAGGGATGCAGCAGAGCAGCAAGGGGAGCGGGTCGAGGCCA TCGTCGTCATCGCTGGTACCAGGCCCAGCGACGGCGACGGGGAAGAAGGCAAGCTTCTTA GGGTCGGTGTCGCGGACGTTGAGCCGGCTGAACCCGTTTAAGGGCGGGTGGGCCAAGGAC ACGACCAGCATTGCCGATGGGCGTGACAGGACTTCCATGCATGTGGTGAAGCCCAAGAGG AGGAGGTTCTCCATCGGCTAATTCTTTTGTGATATATCGATATGATCGTGTCATCGTGTG TGTGACTTATATTAAATCACTGTGATTAGAGGCTAGAACAAGGGGTGTGGATGTTTGTAC TTTCTCTGTCAATGAAAAAACAATATGCACTACAAAGGCAAAAGTGTAGGTTAAAATAGT GGACTAAGGAGTAAATATTAATAGTACTGT