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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d005037_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:155349292:155350224:1 gene:Zm00001d005037 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase APK1B chloroplast
Sequence

ATGTCTGGGCCGCTTCTGCTTCTTCTTCCCTTATTCTTAAATATTAGTCGTCGTCGGCGT
CGTCGTCTTCCCTCTCCAGACCCTTCCACTAGTATATATAATATCAGCCGGCCACCACCA
AAGCAGACTCCTTATTCAGCCCCCATGACGATGGTCTCCCTCGCCGGCTTCACCGCTCTA
TCTGCCGGCCTCCTGCTCATCTCCTCGTTCCTGCGAGCTCAAGGAGCCAGCGGCGGCGAG
TCGTACGTGCCGGTGCGGAGGGTGGTGTACCGGTCCATGTCGCCGGCGGCGGGGGCGGCG
ATGACCACGGCAGAGGCGGCGGCGGCGGCGCCACCGTACCAGCCGTTCGAGGTGTGCGAG
GGGTGCCGGTGCTGCGCGTCGTCGTCGTCCAATAATGGCAGCAGCAGCAGCTGTGTGGAC
ACGAGCTGCTGCTACGCCATCGACTGCGACCTCCCCGGCAAGCCCTTCGGCACCTGCGCC
TTCACCCCGCAGACCTGCGGCTGCGGCGCCGCCAGCAACAACTGCAGCCAGCCGGCACCC
TGA

Peptide Sequence

PEP ID

Zm00001d005037_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:155349292:155350224:1 gene:Zm00001d005037 transcript:Zm00001d005037_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase APK1B chloroplast
Sequence

MSGPLLLLLPLFLNISRRRRRRLPSPDPSTSIYNISRPPPKQTPYSAPMTMVSLAGFTAL
SAGLLLISSFLRAQGASGGESYVPVRRVVYRSMSPAAGAAMTTAEAAAAAPPYQPFEVCE
GCRCCASSSSNNGSSSSCVDTSCCYAIDCDLPGKPFGTCAFTPQTCGCGAASNNCSQPAP

Transcript Sequence

Transcript ID

Zm00001d005037_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:155349292:155350224:1 gene:Zm00001d005037 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase APK1B chloroplast
Sequence

ATTTTATTAATCTTTTGAATTTTTGAATATCCAATATCAAATGTCTGGGCCGCTTCTGCT
TCTTCTTCCCTTATTCTTAAATATTAGTCGTCGTCGGCGTCGTCGTCTTCCCTCTCCAGA
CCCTTCCACTAGTATATATAATATCAGCCGGCCACCACCAAAGCAGACTCCTTATTCAGC
CCCCATGACGATGGTCTCCCTCGCCGGCTTCACCGCTCTATCTGCCGGCCTCCTGCTCAT
CTCCTCGTTCCTGCGAGCTCAAGGAGCCAGCGGCGGCGAGTCGTACGTGCCGGTGCGGAG
GGTGGTGTACCGGTCCATGTCGCCGGCGGCGGGGGCGGCGATGACCACGGCAGAGGCGGC
GGCGGCGGCGCCACCGTACCAGCCGTTCGAGGTGTGCGAGGGGTGCCGGTGCTGCGCGTC
GTCGTCGTCCAATAATGGCAGCAGCAGCAGCTGTGTGGACACGAGCTGCTGCTACGCCAT
CGACTGCGACCTCCCCGGCAAGCCCTTCGGCACCTGCGCCTTCACCCCGCAGACCTGCGG
CTGCGGCGCCGCCAGCAACAACTGCAGCCAGCCGGCACCCTGACCACGACCGGTGGTTTC
GATCAATTCAGAGTCGGCGGCTACCTGTTGGGTTTGGATGGGTTTGGCTTTGACTCTTGC
TACACAGCAGCACTAGTATGCTATTGTCCTGTCAGGGTGGCCGGCCTAACTTGTCGCCGT
GTTATATACATGCAAACACACGTACAATAGAGTACATGCATCCGGTTCCCTTTTTTATTT
AGTCCTTTGTTGGTTTACGTCGGATTGCACCCGA