Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005008_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:2:153458481:153461141:1 gene:Zm00001d005008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ulp1 protease family C-terminal catalytic domain containing protein expressed
Sequence	ATGCCAAGGAGTTCTTCTGCGAGCCCCGTTGTCCGCGCCGAGGAAACAACGTCCGGTACC ACCTTCTTCCATGAAGCCCACCGTGACGAGGGCAGTATCGTCGCATCTGTCTCTGCTGAC GACGCTCTTCGCCGCGCGGAAGTTGTTGTTGTGGAAAGAGAGGAGCAGCCGGCCACCAAG GAAATCTGCGAGAATGTTCAGCTGCGGCAGTTTCGGAGCAGCGCTGGTGAAGGTGTTCCG ATCGAAGTGGACAGCAAAGCTTCTGGAGCTGTTTCGCTTGATGCTCGGTGGGTGGCTATG GAGTCTTCTAGCTTTCACAGGGACAACGGTGCCATCGCTGAAGGAGAGGGAGAGGAGGAT GAGCATGTTAAGGAGATATGCCAGCAGGCTGAGAGCGCCGTCGCAGGGAGGTGTGGTGGC TATGGAGTTTGCAGCCAGTATCAGTTCGGTGAGCTCATGAGCTCGTGTTGGCAACCTGTT ACGCGGCAGGATCCTTGTTCCGAGTCCGAGTCGGATTCTAGTGAAAGCTCTTCGGATGCG TCGATCAGTGACATCATACCGATGCTCGACGAGCTGAACCCGCCTGTGGACTTGGGTGCT GGCCACCCTTCCTCAGCCTTCAGAGAGAAGTTGAGCGCCGGCTCATCGGATGATGAAGAT GGCTCGGAGGAGGACAATAACCTTAGCTCAGATGAAGATGGAGAAGAGGAAGAGGAGGAG GAAGAGAAAGGTGATGGAAACAACTGGAAGGGCTCTGTGGATCCAAACTCTCTGGAAGCT GAAGAAAAGAACGGGAGCTCGGAGAGTCTGATGGCGCGGCGAAGAGCAAAGAACGCTCTC GTGTTCGATCTCGACAGGAGGCTAATGGACCTGCAGGCAGCTGATGCAGTCTCGAAAATG GAGGCGGCGTCACGCTTCCGCGTCCAGGTGCCCTCCATCTCCACACCGAGGCGGCCTGGC CCTTCAGACGATCCAGCAGAGGGGGACACAGTGGAGCTGCCGCAGATCCCTGGCTCGGCG CCGCCGTCCGTTCTGCTTCCACGGAGGAAACCATCCGATGATGCTCCGTTCGACGACCAG ATCGTGGACCGCGACAGGCGTCTGCAGGAGACCTGGACTCCTCCTCGCTCAGGCTTTCCA TCATCAGCACAGGGTAGTAGGACACCTGACACTGGCAGCTTGTTCGTGAGGCCGTCTTCT TCTCCGCGACATGGCAGTGGCGTGGTAGAAGTAGAAGCAGAGGAGCCTGGATTGTCCGGT GCCAAAGATGCCGCTGACGACCACTCGGAGTCGGAGAGCGGTTCCGAGGAGGAACCGCCG CTTCCGCTTGGCAGCAATGGCAGGCTATTCGGCTCGCTGGAACCGCGTATTGGCGACGAG ATCAGAATTCTGGGCGCGGCGGTCTCAGACGTGTGCGTGCTAGAACTAGAAGCAAATCTG GGAAGAAGTAATGGAGGCAGCGCTGGTTCCATCGACGCCGCAGATTCCTCTCATGTCCAA AAGCCCGTGTCGAGCAGCGGGTCGGATGATGCGGACGATTCAGCTTCCGCAGCATGCAGA TGCAGGCAATGCGCGATCGGTAGTACTGCGTCCTCTATCTGA

Peptide Sequence

PEP ID	Zm00001d005008_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:2:153458481:153461141:1 gene:Zm00001d005008 transcript:Zm00001d005008_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ulp1 protease family C-terminal catalytic domain containing protein expressed
Sequence	MPRSSSASPVVRAEETTSGTTFFHEAHRDEGSIVASVSADDALRRAEVVVVEREEQPATK EICENVQLRQFRSSAGEGVPIEVDSKASGAVSLDARWVAMESSSFHRDNGAIAEGEGEED EHVKEICQQAESAVAGRCGGYGVCSQYQFGELMSSCWQPVTRQDPCSESESDSSESSSDA SISDIIPMLDELNPPVDLGAGHPSSAFREKLSAGSSDDEDGSEEDNNLSSDEDGEEEEEE EEKGDGNNWKGSVDPNSLEAEEKNGSSESLMARRRAKNALVFDLDRRLMDLQAADAVSKM EAASRFRVQVPSISTPRRPGPSDDPAEGDTVELPQIPGSAPPSVLLPRRKPSDDAPFDDQ IVDRDRRLQETWTPPRSGFPSSAQGSRTPDTGSLFVRPSSSPRHGSGVVEVEAEEPGLSG AKDAADDHSESESGSEEEPPLPLGSNGRLFGSLEPRIGDEIRILGAAVSDVCVLELEANL GRSNGGSAGSIDAADSSHVQKPVSSSGSDDADDSASAACRCRQCAIGSTASSI

Transcript Sequence

Transcript ID	Zm00001d005008_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:153458481:153461141:1 gene:Zm00001d005008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ulp1 protease family C-terminal catalytic domain containing protein expressed
Sequence	AGGTGACGGCGCTCCAGCGACCGGAGACGGAGAGGGCCCGTCCCCCCCTGATGCTGTGGC TGTGGCTGTGGCTGTGGCTGTGGCTGTATCCACACCATCCGTTGCTGAGTCTTGTCCAGC AGTTGCCGTGGAGGTTCAGCGTGTCGCCGCCGTCGCCCACATGCCAAGGAGTTCTTCTGC GAGCCCCGTTGTCCGCGCCGAGGAAACAACGTCCGGTACCACCTTCTTCCATGAAGCCCA CCGTGACGAGGGCAGTATCGTCGCATCTGTCTCTGCTGACGACGCTCTTCGCCGCGCGGA AGTTGTTGTTGTGGAAAGAGAGGAGCAGCCGGCCACCAAGGAAATCTGCGAGAATGTTCA GCTGCGGCAGTTTCGGAGCAGCGCTGGTGAAGGTGTTCCGATCGAAGTGGACAGCAAAGC TTCTGGAGCTGTTTCGCTTGATGCTCGGTGGGTGGCTATGGAGTCTTCTAGCTTTCACAG GGACAACGGTGCCATCGCTGAAGGAGAGGGAGAGGAGGATGAGCATGTTAAGGAGATATG CCAGCAGGCTGAGAGCGCCGTCGCAGGGAGGTGTGGTGGCTATGGAGTTTGCAGCCAGTA TCAGTTCGGTGAGCTCATGAGCTCGTGTTGGCAACCTGTTACGCGGCAGGATCCTTGTTC CGAGTCCGAGTCGGATTCTAGTGAAAGCTCTTCGGATGCGTCGATCAGTGACATCATACC GATGCTCGACGAGCTGAACCCGCCTGTGGACTTGGGTGCTGGCCACCCTTCCTCAGCCTT CAGAGAGAAGTTGAGCGCCGGCTCATCGGATGATGAAGATGGCTCGGAGGAGGACAATAA CCTTAGCTCAGATGAAGATGGAGAAGAGGAAGAGGAGGAGGAAGAGAAAGGTGATGGAAA CAACTGGAAGGGCTCTGTGGATCCAAACTCTCTGGAAGCTGAAGAAAAGAACGGGAGCTC GGAGAGTCTGATGGCGCGGCGAAGAGCAAAGAACGCTCTCGTGTTCGATCTCGACAGGAG GCTAATGGACCTGCAGGCAGCTGATGCAGTCTCGAAAATGGAGGCGGCGTCACGCTTCCG CGTCCAGGTGCCCTCCATCTCCACACCGAGGCGGCCTGGCCCTTCAGACGATCCAGCAGA GGGGGACACAGTGGAGCTGCCGCAGATCCCTGGCTCGGCGCCGCCGTCCGTTCTGCTTCC ACGGAGGAAACCATCCGATGATGCTCCGTTCGACGACCAGATCGTGGACCGCGACAGGCG TCTGCAGGAGACCTGGACTCCTCCTCGCTCAGGCTTTCCATCATCAGCACAGGGTAGTAG GACACCTGACACTGGCAGCTTGTTCGTGAGGCCGTCTTCTTCTCCGCGACATGGCAGTGG CGTGGTAGAAGTAGAAGCAGAGGAGCCTGGATTGTCCGGTGCCAAAGATGCCGCTGACGA CCACTCGGAGTCGGAGAGCGGTTCCGAGGAGGAACCGCCGCTTCCGCTTGGCAGCAATGG CAGGCTATTCGGCTCGCTGGAACCGCGTATTGGCGACGAGATCAGAATTCTGGGCGCGGC GGTCTCAGACGTGTGCGTGCTAGAACTAGAAGCAAATCTGGGAAGAAGTAATGGAGGCAG CGCTGGTTCCATCGACGCCGCAGATTCCTCTCATGTCCAAAAGCCCGTGTCGAGCAGCGG GTCGGATGATGCGGACGATTCAGCTTCCGCAGCATGCAGATGCAGGCAATGCGCGATCGG TAGTACTGCGTCCTCTATCTGAAGAAGAAGAAGAAGACGGCGGTGCTGAGGAACACGTCG TCGTTGATGAAGAAGGAGAAGAAGGCTCCATGAGCGAGGCCACCTCGCTGTTCAAGTGCC GCATGGAGCAAGTGCTGGTGCAGTCCGTTTCGGAGGCCGGCGTAGGGCAGCCCCTGGCGG TTGGACCCGGGCGTGAGCGGCTGAGCCTGAGCGATGCTCTGTTACCTCCTGCGACCCCTT TGGTTGTTACTGGTGAGGCGAGACCGTCGGCAAAGGAGCTGCTGAGCTCACGGCTTGCTC AGGTGGATGGAGAAGAAGCGCTGGCGCCGGTGATGCCTGCTGCTGCTGGTAGCCCAGAGT CGGAGCTCATGTGTGCTGTTGGTTGCGGTGTGCTGGGTCGTGACGCAGAACCTGCTTCGG AGGACGACGCCAACGACCCTACTACTACTACTCATGTGCCGTCAAGCATCGGCGGCCGCG GCGGCGGCGACATTGCTGGTGATGGCCAAGTATAACCCTGCTTGTGCTTGCTCAAGGTGG TGGTGGGAATGGGCGAGGGAGACGTCATCGTCTTCTCGGATGTGTGTTTTTTGATCTTCG GAGAGAATGGAGTGCGCATGTGTATGGTGGTCTGTTCTTTTTTTTTTCTTTTTTCTGTTT AGTTTAGTTCGTCTGTTCATACTTGTTCCTTTTCTTTTTTTTTTTATTGTCGAATTCGGA TGGACAAAGTAGGGCGACGCATGCAGTTTGGTAGCAGCGTGGATCGCTGGTTGTTTCGTG TAACGCGTGCCGAGTGCAGTTTTTTTT