Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004930_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:149275452:149278598:-1 gene:Zm00001d004930 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase FKBP42
Sequence

ATGGCTGTCGTCGAAGAAGACGCTGCGGCGTCTGCAGATCCCGCCGCCGCGTCCGATCCC
GCCGCTGGCTCCAGCGAAAACGAGATCACAGTAGAAGAGGCTTCTTTCGTGCATTCTGAA
CCTCCCCAGGATGGCAGCGCCCCACCCGTGGTTTCCTCTGACATGGAGGCCCTTCACGAC
AAGGTTAAGAAGCAAATCATCAAAGAAGGCCATGGCAGGAAACCGCTGAAGTTCGCGACG
TGCTTTGTGCACTATAGAGCATGGGTTCAAGGATCATCGCATAAATTTGAGGATACCTGG
CAAGAGCAACATCCAATTGAACTAGTACTTGGAAAAGAGAAAAAACAAATGTCTGGTTTA
GGCATCGGTGTTGGCAGCATGAAAAGCGGGGAGCGTGCATTGTTGCATGTTGGTTGGGAG
CTAGGCTATGGCAAAGAAGGAAGTTTTTCATTCCCAAATGTCCCTCCAATGGCAGACCTT
GTTTATGAAGTTGAACTCATTGGATTTGATGATGTTAAAGAGGGTAAATCCCGAAGTGAC
ATGACAGTTGAAGAGAGGATTGCAGCTGCAGACAGGAGAAAGATTGAGGGCAATGCATAT
TTCAAAGAAAAGAAGCTTGAGGAGGCCATGCAGCAATATGAAATGGCGATTGCATACATG
GGAGATGATTTCATGTTTCAATTATTTGGAAAGTACAGAGACATGGCCTTGGCTGTGAAA
AATCCATGCCATCTCAATATGGCTGCATGCCTGATCAAACTAAAGAGATTCGATGAAGCT
ATTGCGCAGTGTAGCATTGTTTTGACAGAAGATGAAAGTAATGTCAAAGCGCTGTTCAGG
CGAGGAAAAGCTAAATCTGAACTTGGCCAGACAGAATCAGCGAGGGAAGATTTCCTCAAA
GCGAAGAAGTACTCCCCAGAAGACAAGGAGATCATTCGGGAGCTCCGTTTGCTCGCGGAA
CAAGACAAGGCACTATACCAGAAGCAGAAGGAGCTCTACAAAGGTCTCTTTGGGCCAAGT
CCTGAAGCGAAACCGAAGAAGGCAAAGTACCTCGTTGTGTTTTGGCAGTGCCTGGTGTCA
TTTATCCTTTATCTGGCTGGGATGTTCAAACGGAAGAACGAGTAG

Peptide Sequence

PEP ID

Zm00001d004930_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:149275452:149278598:-1 gene:Zm00001d004930 transcript:Zm00001d004930_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase FKBP42
Sequence

MAVVEEDAAASADPAAASDPAAGSSENEITVEEASFVHSEPPQDGSAPPVVSSDMEALHD
KVKKQIIKEGHGRKPLKFATCFVHYRAWVQGSSHKFEDTWQEQHPIELVLGKEKKQMSGL
GIGVGSMKSGERALLHVGWELGYGKEGSFSFPNVPPMADLVYEVELIGFDDVKEGKSRSD
MTVEERIAAADRRKIEGNAYFKEKKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVK
NPCHLNMAACLIKLKRFDEAIAQCSIVLTEDESNVKALFRRGKAKSELGQTESAREDFLK
AKKYSPEDKEIIRELRLLAEQDKALYQKQKELYKGLFGPSPEAKPKKAKYLVVFWQCLVS
FILYLAGMFKRKNE

Transcript Sequence

Transcript ID

Zm00001d004930_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:149275452:149278598:-1 gene:Zm00001d004930 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase FKBP42
Sequence

ACAAACTACCGCAGCTTATCAAGCAAGCGCTACGGAGCGCAGGTCACCGAGCTCTGGCCC
GCCCAAGTTCACTACCCGACCCGCCGCGCCGCAGTCTAGAAGCTTCTGCCGGCCGTCTGC
GGCCCGCCCATCCGCAACCCATGGCTGTCGTCGAAGAAGACGCTGCGGCGTCTGCAGATC
CCGCCGCCGCGTCCGATCCCGCCGCTGGCTCCAGCGAAAACGAGATCACAGTAGAAGAGG
CTTCTTTCGTGCATTCTGAACCTCCCCAGGATGGCAGCGCCCCACCCGTGGTTTCCTCTG
ACATGGAGGCCCTTCACGACAAGGTTAAGAAGCAAATCATCAAAGAAGGCCATGGCAGGA
AACCGCTGAAGTTCGCGACGTGCTTTGTGCACTATAGAGCATGGGTTCAAGGATCATCGC
ATAAATTTGAGGATACCTGGCAAGAGCAACATCCAATTGAACTAGTACTTGGAAAAGAGA
AAAAACAAATGTCTGGTTTAGGCATCGGTGTTGGCAGCATGAAAAGCGGGGAGCGTGCAT
TGTTGCATGTTGGTTGGGAGCTAGGCTATGGCAAAGAAGGAAGTTTTTCATTCCCAAATG
TCCCTCCAATGGCAGACCTTGTTTATGAAGTTGAACTCATTGGATTTGATGATGTTAAAG
AGGGTAAATCCCGAAGTGACATGACAGTTGAAGAGAGGATTGCAGCTGCAGACAGGAGAA
AGATTGAGGGCAATGCATATTTCAAAGAAAAGAAGCTTGAGGAGGCCATGCAGCAATATG
AAATGGCGATTGCATACATGGGAGATGATTTCATGTTTCAATTATTTGGAAAGTACAGAG
ACATGGCCTTGGCTGTGAAAAATCCATGCCATCTCAATATGGCTGCATGCCTGATCAAAC
TAAAGAGATTCGATGAAGCTATTGCGCAGTGTAGCATTGTTTTGACAGAAGATGAAAGTA
ATGTCAAAGCGCTGTTCAGGCGAGGAAAAGCTAAATCTGAACTTGGCCAGACAGAATCAG
CGAGGGAAGATTTCCTCAAAGCGAAGAAGTACTCCCCAGAAGACAAGGAGATCATTCGGG
AGCTCCGTTTGCTCGCGGAACAAGACAAGGCACTATACCAGAAGCAGAAGGAGCTCTACA
AAGGTCTCTTTGGGCCAAGTCCTGAAGCGAAACCGAAGAAGGCAAAGTACCTCGTTGTGT
TTTGGCAGTGCCTGGTGTCATTTATCCTTTATCTGGCTGGGATGTTCAAACGGAAGAACG
AGTAGGATAATTTACCAGAAAATTGTGTAGAACTGGTGGCCTAATTGACCAACCTTGTAT
TATAAGGAGTGTTGAATTTTCTGTAGAACTGTCGGCCGGTCCGGATCAATTAGTTGTTAT
GAACTCTATACGATGTTGTTCACTATTATGCCATAGTTTCATACAGTCTTTCAACTGGAG
CTCAAAGGGCCTTT