Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004810_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:140744122:140749863:1 gene:Zm00001d004810 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 6 description:FHA domain-containing protein PS1
Sequence

ATGGCGGCGGCGGACGGGGACGCCTTGATCGCGGCGTTTGCGGTGTCCAAGGGCGGCATC
GTGCTCAAGCACATTTTCCTCAACGCACCACCGCCGGAGGCGATGTGCGGGTCCGGCGGA
AGAGAAGTGGAGAGTGATGAGGAGGACCCGCCGGTGATGGTGGGTCGGCACCCCGACTGC
CACGTGCTCGTCGACCACCCCAGCGTCAGCCGCTTCCACCTCGAGCTACGGTGCCGACGT
CGACAGAGTCTCATCACCGTCACCGACCTCCACTCCGTGCACGGGACATGGGTTTCGGGG
CGACGGATCCCACCCAACACGCCAGTGGATCTCGCTACCGGTGACACGCTGCGGCTCGGG
GCCTCTAAGAGGGAGTATAAGCTGCTCTGGCTGTCGCTTCGTGAGGCATTTGAGATGGAC
GATCTGATGTATATGCCATCGCTGCCTGAGGAGGACAAAGAGGAGCCATATGTTAAGGAA
CCAAGCAGCAAGTTATTGCCTGGGCACAGGGATTCAGTGAACATGGAGACCCATCAGGAT
ACAAGTGAACAAATTGTGTCTGAAGACATTGCATTTCCAGCCAAAGTGGCCCCCTCAGCA
CCTCCATTGTCTGAGTTCCTTCAACCTTTTTTTGTGGAAGAGCATTCACTTTCCCAATTT
CATGAGAAAAGAAACGGAGTGACAGAGGAAAAGTTGGTCGACAAGAATCAAATTTCAGAA
TCTTTTGGTTCGTTGATCATACAGGAAATGCCAGGCACACTGACAAATGCTGGAAAATCA
ATCCAGTCAGGCGAGCAGGAGGATGCCTCAAACAAAGTGTCCAAGAGGTCCAAGTTGAAG
TCAGTCAAATCACTTCGTGTTGACACAGGCAGGAGCAGCGAGAGAAGCAGCACTCTGAGC
CATAGCTTTCAGAAGGGAGACCAAAATGATATTGTTGTATGTTCTCAGAGCTGTGGGACA
GAATGTGCGGTATGTATAGCTTTATTTGGTATTTCTGAAATTGAAAAGGCTGAAGAAAAG
GAAGAGTTGATTGCTGAAGATAACGTTGACATGAATCCCCCGGCCAGCATGATCATGGAG
GGAAATATGAACGAGAGAAAACCTGATAATTATATCCCACAAGATCCAATTGGTGCAAAG
CTGCAGAAGAAACTAGGCTTATTAGATTCTGCTCTCCCTTTGCATTTCAAAGATGATGTG
TTCGCCGACAAGGAAATTCCACAATGGAATGTTGCTAGTGTTCATACAGAATCTGAGCTT
CTTTCAGAATATCTTATAATACCAGAAGTGAAGCACGATGACTTGAACCATCTTAACTTG
GAGGAAGGTCTCTCAAAAAGCGAGAATATAAACCCAAATAAGATTACTGAGGGCCCTGGG
AACTGTCAGCTCGAAGGGACCATTCGTGGGAATCTATTTGACAATTTGGATACTGATGGA
ATTGAAGAAGGTGAAGAGATCTGCCCACTGGACAAGGATGAAATCACCCCCAATGGATCA
GGTAACATAATAATGGAGAGGAGCAATATAGTTTTAAAGCCTACCATTTCCCAACAGTTG
ATGGATTCTATTTCCCCTCTCAATTTAGATCATGGCGACTTTTCTGAAAATGAGAACTCC
ATGCTGAACACTGGAGATCAGATGAAATTAAATGAACCTGTCTCTGAGAATCTTAACCCA
TTAATTCCAACTGATGAAAAATATCTGAAGAGCCAAACGGAGGAGTGTATGCCCATTTCA
TATCTGGAATTCAAAGATGATATCCTTCTGGATAGGGAAAACTCAGTGCTGGCTCCGAGA
AAGTACGAGGCTATGTCCCCTGTGAGGCAGGAAAATCTGTTCTCAGACAAAGAGAACGTG
ACTCCTGCCTCTAAGGTGAAGACCGTTGTTAGGGGAGTTCTTGGTACAAGGATGGATAAT
TCAGTGTCAGCAGCAAATGCTTCAAATAAGAATAAAGTTCTTGGGTCAAGGGTCGATAAT
TCAGTGTCAACAGAGAATAGCTCAAATAAGAAGCAATGTGAATTATCATCGAAGTCCAAA
AAAGTCCACACAGTAGATTTTGATGTTTTCTATTCGGATAAGGAGAACTTGACTCCTATA
TCTTCAGGAGGCATGAAAGCAAGGAAGTGTTTTCCCAAGGACCTCTCAGTCGACTTAGAC
CAAGATCAGGAAGCATTCTGCTCAGACAAGGAGAACTTGACACCACTATCTTCTGCAGCT
CGGAAAACAAGGGACATGTCTGGAAACCTTACACGAGTTGAAAGTGCGGTCACAAAGAAA
AGGGTTGTTGGTAGGCTCCCCTTCCAGACTCTTGTGTCAAATTCTCCTTTGAGACCTGCT
AGCTCGCATGATTGTACCTGTGCTGTTGCTAGACCAGCTGGCGTTGCTGCTGGTGACTTG
GCGATCAAGTTAGAAGATAAATTGAACGATCTCTCATGTAATGGCCACGAATCAGGTAGT
GCTGGAGAAGGCATGAAAACCTGGACCATGGTGGCTAATACAGACAGTCTTCTTGATGAC
GAGTCTAGGAAGGCTATTATGCTGCTAAAAGGCTTAAAAGGAACTCGCCTGTTCATACCA
AGGATTGTGATCAGGGAGTTGGATTCCATGAAGCAGCGGGAGGGCCTGTTCAGACGGTCA
ACGAAGGCGACCTCCATCCTGCAATGGATCGAGGAGTGCATGGCAAGGGAGAGCTGGTGG
ATCCACGTCCAGAGCTCGGCCGACATGTTCCCGGTAGCACCAACCCCGCCCGCGACCCCT
TCAGCGCAGCGCATCGACGAGGAGATCGAGATCAGCTCCGGCTCCTTCAACCCGATGATG
GCGTTGTTCGGCCCTCGAAGCTCCGCCGCGCTCGCGGATATGATATCTCCCAGACCCGAG
GACCGCGTCCTCGACTGCGCCCTCCTCGTCAGTAGGGTCCGGAGCAACGAGAAGGTCGTG
GTGCTGTCAAACAGCGTCACGCTCAAGATCAAAGCCATGGCAGAGGTTAGTACGGGCCTG
CCATGCGAGGGAGCCAAGGAGTTCCGCGAGTCCCTCGTGGACCCGTCCTCCAGGCGGTTC
ATGTGGGCGGCCAGCGCCCCACGGGGGTCGGCCTGGTCCTGCCTGGACGCGTCCGCGCTG
GCGGAGAACTACTACAACAGCCGCCACCACGCTATGAAGCGGAGGGTTCTGGTGGCGGCG
AGGCCCTCCGAGTCCGAGGCCGCCAAGGGCCTGAAGCTGATCCTGCGTCACAATTCCCTG
TACGCGCAGGCCACGGACGCCGTCAACAAGACGCCGCTGGTATCGCTGGCCGCGGTGTGA

Peptide Sequence

PEP ID

Zm00001d004810_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:140744122:140749863:1 gene:Zm00001d004810 transcript:Zm00001d004810_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 6 description:FHA domain-containing protein PS1
Sequence

MAAADGDALIAAFAVSKGGIVLKHIFLNAPPPEAMCGSGGREVESDEEDPPVMVGRHPDC
HVLVDHPSVSRFHLELRCRRRQSLITVTDLHSVHGTWVSGRRIPPNTPVDLATGDTLRLG
ASKREYKLLWLSLREAFEMDDLMYMPSLPEEDKEEPYVKEPSSKLLPGHRDSVNMETHQD
TSEQIVSEDIAFPAKVAPSAPPLSEFLQPFFVEEHSLSQFHEKRNGVTEEKLVDKNQISE
SFGSLIIQEMPGTLTNAGKSIQSGEQEDASNKVSKRSKLKSVKSLRVDTGRSSERSSTLS
HSFQKGDQNDIVVCSQSCGTECAVCIALFGISEIEKAEEKEELIAEDNVDMNPPASMIME
GNMNERKPDNYIPQDPIGAKLQKKLGLLDSALPLHFKDDVFADKEIPQWNVASVHTESEL
LSEYLIIPEVKHDDLNHLNLEEGLSKSENINPNKITEGPGNCQLEGTIRGNLFDNLDTDG
IEEGEEICPLDKDEITPNGSGNIIMERSNIVLKPTISQQLMDSISPLNLDHGDFSENENS
MLNTGDQMKLNEPVSENLNPLIPTDEKYLKSQTEECMPISYLEFKDDILLDRENSVLAPR
KYEAMSPVRQENLFSDKENVTPASKVKTVVRGVLGTRMDNSVSAANASNKNKVLGSRVDN
SVSTENSSNKKQCELSSKSKKVHTVDFDVFYSDKENLTPISSGGMKARKCFPKDLSVDLD
QDQEAFCSDKENLTPLSSAARKTRDMSGNLTRVESAVTKKRVVGRLPFQTLVSNSPLRPA
SSHDCTCAVARPAGVAAGDLAIKLEDKLNDLSCNGHESGSAGEGMKTWTMVANTDSLLDD
ESRKAIMLLKGLKGTRLFIPRIVIRELDSMKQREGLFRRSTKATSILQWIEECMARESWW
IHVQSSADMFPVAPTPPATPSAQRIDEEIEISSGSFNPMMALFGPRSSAALADMISPRPE
DRVLDCALLVSRVRSNEKVVVLSNSVTLKIKAMAEVSTGLPCEGAKEFRESLVDPSSRRF
MWAASAPRGSAWSCLDASALAENYYNSRHHAMKRRVLVAARPSESEAAKGLKLILRHNSL
YAQATDAVNKTPLVSLAAV

Transcript Sequence

Transcript ID

Zm00001d004810_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:140744122:140749863:1 gene:Zm00001d004810 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 6 description:FHA domain-containing protein PS1
Sequence

CAGCCACGCGCACCGAGAGAAGAGAGATTCCCCACGGCATGGCGGCGGCGGACGGGGACG
CCTTGATCGCGGCGTTTGCGGTGTCCAAGGGCGGCATCGTGCTCAAGCACATTTTCCTCA
ACGCACCACCGCCGGAGGCGATGTGCGGGTCCGGCGGAAGAGAAGTGGAGAGTGATGAGG
AGGACCCGCCGGTGATGGTGGGTCGGCACCCCGACTGCCACGTGCTCGTCGACCACCCCA
GCGTCAGCCGCTTCCACCTCGAGCTACGGTGCCGACGTCGACAGAGTCTCATCACCGTCA
CCGACCTCCACTCCGTGCACGGGACATGGGTTTCGGGGCGACGGATCCCACCCAACACGC
CAGTGGATCTCGCTACCGGTGACACGCTGCGGCTCGGGGCCTCTAAGAGGGAGTATAAGC
TGCTCTGGCTGTCGCTTCGTGAGGCATTTGAGATGGACGATCTGATGTATATGCCATCGC
TGCCTGAGGAGGACAAAGAGGAGCCATATGTTAAGGAACCAAGCAGCAAGTTATTGCCTG
GGCACAGGGATTCAGTGAACATGGAGACCCATCAGGATACAAGTGAACAAATTGTGTCTG
AAGACATTGCATTTCCAGCCAAAGTGGCCCCCTCAGCACCTCCATTGTCTGAGTTCCTTC
AACCTTTTTTTGTGGAAGAGCATTCACTTTCCCAATTTCATGAGAAAAGAAACGGAGTGA
CAGAGGAAAAGTTGGTCGACAAGAATCAAATTTCAGAATCTTTTGGTTCGTTGATCATAC
AGGAAATGCCAGGCACACTGACAAATGCTGGAAAATCAATCCAGTCAGGCGAGCAGGAGG
ATGCCTCAAACAAAGTGTCCAAGAGGTCCAAGTTGAAGTCAGTCAAATCACTTCGTGTTG
ACACAGGCAGGAGCAGCGAGAGAAGCAGCACTCTGAGCCATAGCTTTCAGAAGGGAGACC
AAAATGATATTGTTGTATGTTCTCAGAGCTGTGGGACAGAATGTGCGGTATGTATAGCTT
TATTTGGTATTTCTGAAATTGAAAAGGCTGAAGAAAAGGAAGAGTTGATTGCTGAAGATA
ACGTTGACATGAATCCCCCGGCCAGCATGATCATGGAGGGAAATATGAACGAGAGAAAAC
CTGATAATTATATCCCACAAGATCCAATTGGTGCAAAGCTGCAGAAGAAACTAGGCTTAT
TAGATTCTGCTCTCCCTTTGCATTTCAAAGATGATGTGTTCGCCGACAAGGAAATTCCAC
AATGGAATGTTGCTAGTGTTCATACAGAATCTGAGCTTCTTTCAGAATATCTTATAATAC
CAGAAGTGAAGCACGATGACTTGAACCATCTTAACTTGGAGGAAGGTCTCTCAAAAAGCG
AGAATATAAACCCAAATAAGATTACTGAGGGCCCTGGGAACTGTCAGCTCGAAGGGACCA
TTCGTGGGAATCTATTTGACAATTTGGATACTGATGGAATTGAAGAAGGTGAAGAGATCT
GCCCACTGGACAAGGATGAAATCACCCCCAATGGATCAGGTAACATAATAATGGAGAGGA
GCAATATAGTTTTAAAGCCTACCATTTCCCAACAGTTGATGGATTCTATTTCCCCTCTCA
ATTTAGATCATGGCGACTTTTCTGAAAATGAGAACTCCATGCTGAACACTGGAGATCAGA
TGAAATTAAATGAACCTGTCTCTGAGAATCTTAACCCATTAATTCCAACTGATGAAAAAT
ATCTGAAGAGCCAAACGGAGGAGTGTATGCCCATTTCATATCTGGAATTCAAAGATGATA
TCCTTCTGGATAGGGAAAACTCAGTGCTGGCTCCGAGAAAGTACGAGGCTATGTCCCCTG
TGAGGCAGGAAAATCTGTTCTCAGACAAAGAGAACGTGACTCCTGCCTCTAAGGTGAAGA
CCGTTGTTAGGGGAGTTCTTGGTACAAGGATGGATAATTCAGTGTCAGCAGCAAATGCTT
CAAATAAGAATAAAGTTCTTGGGTCAAGGGTCGATAATTCAGTGTCAACAGAGAATAGCT
CAAATAAGAAGCAATGTGAATTATCATCGAAGTCCAAAAAAGTCCACACAGTAGATTTTG
ATGTTTTCTATTCGGATAAGGAGAACTTGACTCCTATATCTTCAGGAGGCATGAAAGCAA
GGAAGTGTTTTCCCAAGGACCTCTCAGTCGACTTAGACCAAGATCAGGAAGCATTCTGCT
CAGACAAGGAGAACTTGACACCACTATCTTCTGCAGCTCGGAAAACAAGGGACATGTCTG
GAAACCTTACACGAGTTGAAAGTGCGGTCACAAAGAAAAGGGTTGTTGGTAGGCTCCCCT
TCCAGACTCTTGTGTCAAATTCTCCTTTGAGACCTGCTAGCTCGCATGATTGTACCTGTG
CTGTTGCTAGACCAGCTGGCGTTGCTGCTGGTGACTTGGCGATCAAGTTAGAAGATAAAT
TGAACGATCTCTCATGTAATGGCCACGAATCAGGTAGTGCTGGAGAAGGCATGAAAACCT
GGACCATGGTGGCTAATACAGACAGTCTTCTTGATGACGAGTCTAGGAAGGCTATTATGC
TGCTAAAAGGCTTAAAAGGAACTCGCCTGTTCATACCAAGGATTGTGATCAGGGAGTTGG
ATTCCATGAAGCAGCGGGAGGGCCTGTTCAGACGGTCAACGAAGGCGACCTCCATCCTGC
AATGGATCGAGGAGTGCATGGCAAGGGAGAGCTGGTGGATCCACGTCCAGAGCTCGGCCG
ACATGTTCCCGGTAGCACCAACCCCGCCCGCGACCCCTTCAGCGCAGCGCATCGACGAGG
AGATCGAGATCAGCTCCGGCTCCTTCAACCCGATGATGGCGTTGTTCGGCCCTCGAAGCT
CCGCCGCGCTCGCGGATATGATATCTCCCAGACCCGAGGACCGCGTCCTCGACTGCGCCC
TCCTCGTCAGTAGGGTCCGGAGCAACGAGAAGGTCGTGGTGCTGTCAAACAGCGTCACGC
TCAAGATCAAAGCCATGGCAGAGGTTAGTACGGGCCTGCCATGCGAGGGAGCCAAGGAGT
TCCGCGAGTCCCTCGTGGACCCGTCCTCCAGGCGGTTCATGTGGGCGGCCAGCGCCCCAC
GGGGGTCGGCCTGGTCCTGCCTGGACGCGTCCGCGCTGGCGGAGAACTACTACAACAGCC
GCCACCACGCTATGAAGCGGAGGGTTCTGGTGGCGGCGAGGCCCTCCGAGTCCGAGGCCG
CCAAGGGCCTGAAGCTGATCCTGCGTCACAATTCCCTGTACGCGCAGGCCACGGACGCCG
TCAACAAGACGCCGCTGGTATCGCTGGCCGCGGTGTGAGATCCCCCGCCCTCGGTTCTTG
TTTTGGCGTGTTGTTGTCATGATTTCCATGCCGAGCGAAACTGTGGGCCGTGTGCAGACT
TTGAACAGGACACCGTCAGTGGTTTCGTTTTGGGCCATCATGAGTTTTTGAGTTTGTGCC
T