Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d004807_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:140587884:140592773:1 gene:Zm00001d004807 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta-1
Sequence	ATGGAGAAGGCGTGCACATTGCTAGTGTACTTCGATAAGGGCTCGCCGTCCATGGCGAAC GAGATCAAGGCGGAGCTCGAGTCCGGCGACGGACCCGCCAAGGCCGACGCCATGCGCCGC GCCATCTTGCTCCTCCTCAACGGCGAGTCCCTACCGCACCTCTTCATCACCGTCGTCCGC TACGTGCAGTCCTGCGACGACCACGCTGTCCAGAAGCTGCTCCTCCTCTACCTCGAGACC GTCGACAAGCGCAACGCTGCCACGGGAAAGATCCTCCCGGAGATGATCCTCATCTGCCAA AATCTCCGCAACAACCTGCAGAGCCCTAACGAGTACATCCGCGGCGTCACGCTGCGGTTC CTCTGCCGGCTCACCGAGCCCGAGCTGCTCGAGCCGCTCGTCCCCTCCATCCTCGCCAAC CTCGAGCACCGACACCACTTCGTGCGCCGCCACGCGCTCTCCGCTATCTCGGCCATCTAC AGCCTCCAGCAGGGGGACCAGCTCATCCCCGACGCGCCGGAGCTCGTCGAGCGCGCGCTT GCCTCCGAACAGGACCCCGCCGCGCGCAGGAACGCGTTCCTCATGCTCTTGGCTGCTGGG CAGGACCGCGCCGTGGGCTACCTCTTCAACAACGCCGACCGCGTCGCGGAGTGGCCCGAT CTGCTGCAGATGGCCGCCGTCGACCTCATCCGCAAGGTCTGCCGCTCCAAGGGCCGTGCC GACAAGGGCAGGTATATCAGGGTCATCATCTCCCTCCTCTCAGCGTCCAGCGCGGCTGTC GTGTACGAGGGCGCGGGGGCGCTCGTGTCCCTCTCCTCTGCGCCCACGGCTGTGCGGGCC GCCGCCAATACATACTGCCAGCTGCTATCCTCGCAGAGCGACAACAATGTGAAGCTCATC GTCCTGGACCGCCTGCACGAGCTATGCTCCTCTCACAGGGAGGTGATGGTGGATATGGTC ATGGATGTGCTGCGCGCGCTCGCTAGCCCCAATGTGGATGTCAGGAGAAAGGTTCTGGAT TTAGTCCTGGATCTACTCACCCTGAGAAATGTTGAGGAGGTGGTGCTCTACCTCAAGAAG GAGGTGGTTAAGACACAGGCTGCTGAGGTGAAGGGTGATGAATACCGCCAGATGCTAGTG CAGGCCATCCATAACTGTGCCAAGAAGTACCCAGAGGTGGCTGCATTGGTTGTACACCTT CTCATGGACTTCCTTGGGGATCCTAATGTTGCTGCAGCACTCGATGTTGTTCTATTTGTG CGCGAGATTATAGAGACTAATCCCAAGCTTCGTGTGTCCATGATCCAGAGGCTGATCGAC ATATTCTATCAGATCCGGGCATCTCATGTCTGCTCTTGTTCTCTCTGGATCCTTGGAGAG TATTCCCTCTCTCTGCCTGAGGTTGAGAGTGCCATTTCTACCATCAAGCAATGCCTTGGG GATCTTCCATTCTACACTGTCTCTGAGGAACGTGAGACAACTGATTCATCTAAGCCATCT CAGCCAGTGGTGAGCTCTGTCACCGTGTCTTCGAGGAGGCCTGCTGTTCTAGCAGATGGA ACTTATGCCACACAGAGTGCTGCCACTGAGATTGCTGTTTCAGCTCCTGCTTCAGCTCTT GGGTCCTTGGCTTCCACCCAGAATCTCAGATCTCTCATTCTGTCTGGTGATTTCTTCTTG GCTGCTGTTGTTGCCTGTAGCCTGACCAAGCTTGTGTTAAGGCTGGAGGAGATTCAGCCA GCAAAGGTTGAAGTAAACAAGGTTAGTACTGAAGCCCTGTTGATCATGGTGTCCATCTTG CAGTTGGGACAGTCATCTTATCTCCCACACCCTATTGACAATGACTCATATGATCGGATT GTTCTCTGTGTGAGGCTTCTTTGCAATACTGGTGATGATGTTAGGAAGGTCTGGTTACAG TCTTGCCGCCAGAGCTTTGTCAACATGCTTGCTGAGAAGCAATTTAGGGAGACTGAGGAG ATGAAGGCCAAGGCACAGATAACTTATGCCCAACCAGACGATCTTATTGATTTCTATCAC CTAAAGAGCAGGAAGGGAATGAGTCAGCTTGAGCTGGAAGATGCAGTTCAAGATGATTTG AAGGCTGCAACCGGCCAATTTACTAAGGATGCAGATGATACTGACAAGCTAAACCGTATT CTTCAGTTGACAGGATTCAGTGATCCTGTGTATGCCGAAGCATTTGTAACTGTTCATCAT TATGATATTGTACTTGATGTTACAGTCGTAAACCGAACGAAAGAAACACTCCAAAACTTA TGCTTGGAATTAGCAACAATGGGTGACCTAAAACTTGTTGACCGTCCTCAAAACTATACA TTGGCTCCTGAGTCAAGCAAGCAAATTCGAGCCAATATCAAGGTCTCATCAACGGAGACT GGAGTCATATTTGGTAACATAGTTTATGAAACATCGAACGTGATGGAACGATCTGTGGTT GTCCTAAATGACATTCACATTGATATTATGGATTACATCTCACCTGCTACATGTGCTGAT GTTGCATTCCGGAACATGTGGGCAGAATTTGAGTGGGAAAATAAGTAA

Peptide Sequence

PEP ID	Zm00001d004807_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:140587884:140592773:1 gene:Zm00001d004807 transcript:Zm00001d004807_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta-1
Sequence	MEKACTLLVYFDKGSPSMANEIKAELESGDGPAKADAMRRAILLLLNGESLPHLFITVVR YVQSCDDHAVQKLLLLYLETVDKRNAATGKILPEMILICQNLRNNLQSPNEYIRGVTLRF LCRLTEPELLEPLVPSILANLEHRHHFVRRHALSAISAIYSLQQGDQLIPDAPELVERAL ASEQDPAARRNAFLMLLAAGQDRAVGYLFNNADRVAEWPDLLQMAAVDLIRKVCRSKGRA DKGRYIRVIISLLSASSAAVVYEGAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLI VLDRLHELCSSHREVMVDMVMDVLRALASPNVDVRRKVLDLVLDLLTLRNVEEVVLYLKK EVVKTQAAEVKGDEYRQMLVQAIHNCAKKYPEVAALVVHLLMDFLGDPNVAAALDVVLFV REIIETNPKLRVSMIQRLIDIFYQIRASHVCSCSLWILGEYSLSLPEVESAISTIKQCLG DLPFYTVSEERETTDSSKPSQPVVSSVTVSSRRPAVLADGTYATQSAATEIAVSAPASAL GSLASTQNLRSLILSGDFFLAAVVACSLTKLVLRLEEIQPAKVEVNKVSTEALLIMVSIL QLGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKVWLQSCRQSFVNMLAEKQFRETEE MKAKAQITYAQPDDLIDFYHLKSRKGMSQLELEDAVQDDLKAATGQFTKDADDTDKLNRI LQLTGFSDPVYAEAFVTVHHYDIVLDVTVVNRTKETLQNLCLELATMGDLKLVDRPQNYT LAPESSKQIRANIKVSSTETGVIFGNIVYETSNVMERSVVVLNDIHIDIMDYISPATCAD VAFRNMWAEFEWENK

Transcript Sequence

Transcript ID	Zm00001d004807_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:140587884:140592773:1 gene:Zm00001d004807 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta-1
Sequence	ATGGAGAAGGCGTGCACATTGCTAGTGTACTTCGATAAGGGCTCGCCGTCCATGGCGAAC GAGATCAAGGCGGAGCTCGAGTCCGGCGACGGACCCGCCAAGGCCGACGCCATGCGCCGC GCCATCTTGCTCCTCCTCAACGGCGAGTCCCTACCGCACCTCTTCATCACCGTCGTCCGC TACGTGCAGTCCTGCGACGACCACGCTGTCCAGAAGCTGCTCCTCCTCTACCTCGAGACC GTCGACAAGCGCAACGCTGCCACGGGAAAGATCCTCCCGGAGATGATCCTCATCTGCCAA AATCTCCGCAACAACCTGCAGAGCCCTAACGAGTACATCCGCGGCGTCACGCTGCGGTTC CTCTGCCGGCTCACCGAGCCCGAGCTGCTCGAGCCGCTCGTCCCCTCCATCCTCGCCAAC CTCGAGCACCGACACCACTTCGTGCGCCGCCACGCGCTCTCCGCTATCTCGGCCATCTAC AGCCTCCAGCAGGGGGACCAGCTCATCCCCGACGCGCCGGAGCTCGTCGAGCGCGCGCTT GCCTCCGAACAGGACCCCGCCGCGCGCAGGAACGCGTTCCTCATGCTCTTGGCTGCTGGG CAGGACCGCGCCGTGGGCTACCTCTTCAACAACGCCGACCGCGTCGCGGAGTGGCCCGAT CTGCTGCAGATGGCCGCCGTCGACCTCATCCGCAAGGTCTGCCGCTCCAAGGGCCGTGCC GACAAGGGCAGGTATATCAGGGTCATCATCTCCCTCCTCTCAGCGTCCAGCGCGGCTGTC GTGTACGAGGGCGCGGGGGCGCTCGTGTCCCTCTCCTCTGCGCCCACGGCTGTGCGGGCC GCCGCCAATACATACTGCCAGCTGCTATCCTCGCAGAGCGACAACAATGTGAAGCTCATC GTCCTGGACCGCCTGCACGAGCTATGCTCCTCTCACAGGGAGGTGATGGTGGATATGGTC ATGGATGTGCTGCGCGCGCTCGCTAGCCCCAATGTGGATGTCAGGAGAAAGGTTCTGGAT TTAGTCCTGGATCTACTCACCCTGAGAAATGTTGAGGAGGTGGTGCTCTACCTCAAGAAG GAGGTGGTTAAGACACAGGCTGCTGAGGTGAAGGGTGATGAATACCGCCAGATGCTAGTG CAGGCCATCCATAACTGTGCCAAGAAGTACCCAGAGGTGGCTGCATTGGTTGTACACCTT CTCATGGACTTCCTTGGGGATCCTAATGTTGCTGCAGCACTCGATGTTGTTCTATTTGTG CGCGAGATTATAGAGACTAATCCCAAGCTTCGTGTGTCCATGATCCAGAGGCTGATCGAC ATATTCTATCAGATCCGGGCATCTCATGTCTGCTCTTGTTCTCTCTGGATCCTTGGAGAG TATTCCCTCTCTCTGCCTGAGGTTGAGAGTGCCATTTCTACCATCAAGCAATGCCTTGGG GATCTTCCATTCTACACTGTCTCTGAGGAACGTGAGACAACTGATTCATCTAAGCCATCT CAGCCAGTGGTGAGCTCTGTCACCGTGTCTTCGAGGAGGCCTGCTGTTCTAGCAGATGGA ACTTATGCCACACAGAGTGCTGCCACTGAGATTGCTGTTTCAGCTCCTGCTTCAGCTCTT GGGTCCTTGGCTTCCACCCAGAATCTCAGATCTCTCATTCTGTCTGGTGATTTCTTCTTG GCTGCTGTTGTTGCCTGTAGCCTGACCAAGCTTGTGTTAAGGCTGGAGGAGATTCAGCCA GCAAAGGTTGAAGTAAACAAGGTTAGTACTGAAGCCCTGTTGATCATGGTGTCCATCTTG CAGTTGGGACAGTCATCTTATCTCCCACACCCTATTGACAATGACTCATATGATCGGATT GTTCTCTGTGTGAGGCTTCTTTGCAATACTGGTGATGATGTTAGGAAGGTCTGGTTACAG TCTTGCCGCCAGAGCTTTGTCAACATGCTTGCTGAGAAGCAATTTAGGGAGACTGAGGAG ATGAAGGCCAAGGCACAGATAACTTATGCCCAACCAGACGATCTTATTGATTTCTATCAC CTAAAGAGCAGGAAGGGAATGAGTCAGCTTGAGCTGGAAGATGCAGTTCAAGATGATTTG AAGGCTGCAACCGGCCAATTTACTAAGGATGCAGATGATACTGACAAGCTAAACCGTATT CTTCAGTTGACAGGATTCAGTGATCCTGTGTATGCCGAAGCATTTGTAACTGTTCATCAT TATGATATTGTACTTGATGTTACAGTCGTAAACCGAACGAAAGAAACACTCCAAAACTTA TGCTTGGAATTAGCAACAATGGGTGACCTAAAACTTGTTGACCGTCCTCAAAACTATACA TTGGCTCCTGAGTCAAGCAAGCAAATTCGAGCCAATATCAAGGTCTCATCAACGGAGACT GGAGTCATATTTGGTAACATAGTTTATGAAACATCGAACGTGATGGAACGATCTGTGGTT GTCCTAAATGACATTCACATTGATATTATGGATTACATCTCACCTGCTACATGTGCTGAT GTTGCATTCCGGAACATGTGGGCAGAATTTGAGTGGGAAAATAAGTAATTATTCTTATGA CTATTGTTTTCAATGTTTATCAGGTGGCGGTGAATACTGTGATCCAGGATGAGAAGGAAT TCTTGAATCATATTATTAAGTCCACAAACATGAAGTGTCTAACACCACCGTAAGTTCCAA CAAATCCAGACCATCAGATCTGCGCTCGATGGAGAATGTGGGTTCCTTGCTGCAAATCTC TATGCCAAGAGTGTGTTTGGCGAGGACGCTCTGGTGAATATCAGTGTTGAGAAGCAGGCC GATGGCAAGTTGACTGGCTACATCAGGATAAGAAGCAAGACCCAAGGAATTGCGCTCAGC TTAGGAGACAAGATCACCCTAAAACAGAAGGGAGGCAACAGCTAGCTCAGCTACGAGTCG TTGATCACTGTGGTCTGTGGCAGGCACATATCACCCCCGTTAACTCACCTGAACACAAAA TTTGCTAGTTAGCCACCAATTTTCAGGGTTGCCTCACCTGACAATTTGCTGGTTGCCCAC CAATTTTTAGGATAGCCAATTATTTTGGATGCGCTGTTGATAATAGAAAATAAGGATAGG GCACTAGTCTAAGTTGTAGTATTTTTGGGTCATTTCATGTGCCCTACACCTTTTTGACAA AATATTATAAAATAGAACACTATTAAAGCTGTTTT