Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d004772_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:2:138162888:138168957:-1 gene:Zm00001d004772 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGGAGTTTGCTACGGGTGCCATGGGTACCCTCCTCCCCAAGCTGGGCATGCTGCTGCAG GAAGAACTCCACCTGAAGAATAATGTGAAGGAGGGGATCAAGAGCCTCACTGCCGAGCTT GAGAGCATGCAAGCTGCACTTGTGAAGGTGTCTGACGTGCCATTAGACCAGCTTGACCCA AACGTCAAGATTTGGGCTAATGAAGTCAGGGGGCTGTCCTATGATATTGAGGACAGACTC GACTCCTTCAAGGTGCGCATGGAGGGTCTTGATTCAACCAAGCGCAAAACCATCATGGGA TTCATCCAACAAACCCGTGGCTTGGTCACCAAGTTCAAGATTCGCCATGTAATATTTGAT GACATTAAAGACTTCGGGAGCCAAGTAAAGGAGGTGAAGGAGCGGTATGACAGGTACAAG GTGCATGATGTTGTAGCTAATCCTATCGCAACCACAGTTGACCCTCGTCTCTTGGCTATG TATAACAAGGTTTCCGACCTTGTTGGCATTGACGAAGAAGCTAAGGAGCTAATGAATAAT TTGTTTGAAGATGGTGACGAGCCAGCGAAAAAGATCAAGACAGTCTCTGTTGTTGGATTT GGAGGACTCGGCAAGACTACTCTTGTTAAAGCAGTCTATGACAAGGTTAAGAAGGAGTTT GATTGCAGTGCTTTTGTATCAATAGGTCAGAAATGTGATCTCAAGAAAGTTTTCAAGGAC GTTCTTTATGATCTTGACAAGCAAAATCATGAAAATATCATTGCATCAGAAATGGATGAA AAACAACTCATTGATAAGCTACAGGAATTCCTTGCAGACAAGAGGTACTTGGTTGTTATT GATGACATATGGGATATATCAACATGGAAGCTGATTAGATGTGCTTTGGTGGAAAGTAAC CCTGGAAGTAGAATAATCATAACTACTCGCATTTGTGAAGTTGCCAAAAAGGTTGGTGGT GTTTACAACAAGAAACCACTCTCTCTTGATGACTCCAAGACATTATTCTATACTAGAGTA TTTGCTGGTGAAAGCATGAGTCTTGATAACATATCTGGTGAAGTGTGCAACAAAATCCTA AGAAAATGTGGTGGTGTGCCATTGTCCATCATTACGATAGCTAGTCTGCTTGTTGGTAAA CAGAGGGAGGACTGGTCTAAGGTGTATGATTATATTGGTTTTGGGCATGAAGATAACGAG GTTATTGGGAACATGAGAAAGATATTAGCTTTCAGCTATTACAATCTACCTCCTTATCTA AAGACATGCTTATTGCACCTAAGCATATTTCCAGAAGATCACAAGATTGAGAAAAATTCA TTGATATGGAGGTGGATAGCTGAAGGTTTTGTTATTGGCAGAGAAGAACTAGGGTTATTT GAGGTTGGAGAGAGCTATTTCAATGAGCTCATAAATAGAAGCATGATCCGGTGGATAGAG CTCTCTAGTAGAAGCAAGATTCGAGATGGTTGTGGTATTCATGATATGGTGCTTGATCTT ATCCGCACTTTGTCAGGTGAAGTAAACTTGGTCACGGTATCAGATGTGGAGCAGCAGTGT ACCACATCATCATCATATTCACCAGTCAGAAGCATTAGCGCTCGAAGATTAGCCTTCCAC AAAAAAAGAAGCATTGAACACAACCCTGGCACAGAAATAGGACAGGTGAGATCATTCAAT GCTTTCAACTGCTCTGGTAGTAGGATGCCCCGACTTTTAAGCTTCAGGGTCTTACGTGTA CTAGCTCTGGAGAACTGTAATTTCTCAGCAGGAAACTGTTGCCTTGGAAATATTGGCAAA TTGCATCAGCTGAGGTACCTAGGGCTAGTGGAGACATCCATTCGTGACGACTTGCTGCCT GGAGAAACAGGACACCTCAAGTTTCTGCAGACACTAGATGTAAGACGAAGTGGCATAAAA ATATTGCCAGCGTCTGTTGGTGAGCTAATGAAACTGATGTGCCTGCGTGCTACCGAGGGC ACAAGGATGATGGCCGAGATTGGGAAGCTGGCGTCACTGGAAGAGCTTGAGGTACACTCT GTGGACAAGTCGCCAAACTTCGCCACGGGGCTGGGGCAGCTAACCAAGGTGAGGGTGCTT GAGATCCATTTCGACGAAATGGACGAGAGCACAGAGAAGGCTCTCATGGAGTCCCTGCGC AACCTGCGGAAAATCCAGAGTCTGCAGATATGGTCCAAGAAGGAGAGGACAATTGACCTT GGCGGCTTGTTGGAAGACTGGACGCCAACCCCTTCAGATCTCCGTCAACTGATGCTGTGT GGCATCCATTTGCCCAGGCGTCCGTCATGGATTGATCCCTCATGTGTCCCGCTCCTCTCG TACTTGTCGCTCACGGTCCAGGCCGTGCAAGTGCAGGATCTAGAAATCCTCGGGAGGCTG CCGTTGCTCAGCTACCTCTACATCTGGAGTGAGGGCATCAACTGCTTATCCTATACTGCT ACCAGCAGAGACGAGTTTCAGAATCTGAGACATCTGGACACAAACCTGGAGATCATGTGT GGACAGCAGGGAGCACTGCCTATGGTTGAGAAGTTGACATGCCGTGCCAGCATGGGGAAG TATGTTGCCTTTGCCAGGAGCAGCATGCCTTTCGACGATGGCAGCGTGGTGAATCCTGCT ACTGTTGCTGAGGCAGAATTGCCAGTAATTCTACCTTTGGACATTGGCTGGCCCGTGAAC ATGCCTTGCCTCCGGGGCATCACCTATTTGCTGGATTACCAGGACTGCAGTGCCAAGGAG TGGGCTCATGTGGAGACATTGCTCTTGCACGTGAGAAAAATCCACCCCAACTGTCCACCC TTCCGAATCAAAAAGAACTGCAGAGACAAGAAGATTACCTTGATCGACGCATTCAGCTAC CTTGAAGCTGTCAAGGATGTGTTCAAGGGCAACCCCTCCAAATACTCGGAGTTTTTTGAT CTCATGATTGATTACAAGAGAGACAGAATCAAAATCAAAGATGTGATCATCCGTCTCAAG ACCCTATTTACTGGACATGATCCTAATCTCATCCTTGACTTCAGCGTCTTCCTGCCCAGG GAGTGGGCCATCACTCTCGGGGACCTGTAG

Peptide Sequence

PEP ID	Zm00001d004772_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:2:138162888:138168957:-1 gene:Zm00001d004772 transcript:Zm00001d004772_T006 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MEFATGAMGTLLPKLGMLLQEELHLKNNVKEGIKSLTAELESMQAALVKVSDVPLDQLDP NVKIWANEVRGLSYDIEDRLDSFKVRMEGLDSTKRKTIMGFIQQTRGLVTKFKIRHVIFD DIKDFGSQVKEVKERYDRYKVHDVVANPIATTVDPRLLAMYNKVSDLVGIDEEAKELMNN LFEDGDEPAKKIKTVSVVGFGGLGKTTLVKAVYDKVKKEFDCSAFVSIGQKCDLKKVFKD VLYDLDKQNHENIIASEMDEKQLIDKLQEFLADKRYLVVIDDIWDISTWKLIRCALVESN PGSRIIITTRICEVAKKVGGVYNKKPLSLDDSKTLFYTRVFAGESMSLDNISGEVCNKIL RKCGGVPLSIITIASLLVGKQREDWSKVYDYIGFGHEDNEVIGNMRKILAFSYYNLPPYL KTCLLHLSIFPEDHKIEKNSLIWRWIAEGFVIGREELGLFEVGESYFNELINRSMIRWIE LSSRSKIRDGCGIHDMVLDLIRTLSGEVNLVTVSDVEQQCTTSSSYSPVRSISARRLAFH KKRSIEHNPGTEIGQVRSFNAFNCSGSRMPRLLSFRVLRVLALENCNFSAGNCCLGNIGK LHQLRYLGLVETSIRDDLLPGETGHLKFLQTLDVRRSGIKILPASVGELMKLMCLRATEG TRMMAEIGKLASLEELEVHSVDKSPNFATGLGQLTKVRVLEIHFDEMDESTEKALMESLR NLRKIQSLQIWSKKERTIDLGGLLEDWTPTPSDLRQLMLCGIHLPRRPSWIDPSCVPLLS YLSLTVQAVQVQDLEILGRLPLLSYLYIWSEGINCLSYTATSRDEFQNLRHLDTNLEIMC GQQGALPMVEKLTCRASMGKYVAFARSSMPFDDGSVVNPATVAEAELPVILPLDIGWPVN MPCLRGITYLLDYQDCSAKEWAHVETLLLHVRKIHPNCPPFRIKKNCRDKKITLIDAFSY LEAVKDVFKGNPSKYSEFFDLMIDYKRDRIKIKDVIIRLKTLFTGHDPNLILDFSVFLPR EWAITLGDL

Transcript Sequence

Transcript ID	Zm00001d004772_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:138162888:138168957:-1 gene:Zm00001d004772 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	AACGAATCCAATGGCAATCTTGCTCGGACCAACTTGATTTTCGTATAATTTTGGACACAT CCGGATAAAATGTTGCACAAATCTACTCAAACGTTGCAAAACATAGTGGCAGCCAGGTCT ATATATGATGAGTTGTGAAGAGGTACAACTCCTTCAAAAATCAAGTTGATTATGCGGATA CCGCAAACACTGCAAATTCGGTTGTTCCCTACCCTTCTAGAGTAATCTCTCCACACACAC ACTCACACGCTGCTGCCGGCTGCCCTCCTCCCGCCCCACTCGTCCCCTCCGAACCAAGTC CGATCCATCCATCCCCAAATTTCTCCTCTCAGCGCGTGGGGCAGTGGCGGCGGCAGCGTG GGCGCGCGGACCGCTACGGGCACGGGAGCAGCGGTGGCTGCGCAGGCAGCTGTCAGCATG CGGCATGGTGACTACGGGAGCCCAGGCGGCGCCGGTGCGGCTGCAGCCGGCGGCGGGCGA CCGTGAGGCGGCTGCGGGAGCGGTGAAGTCCGGTGGCGCCTGCTTTGTTTTGTGTTCCTA TTTTTGATTTGCGAAAGGATCCAAGAGAGAAAGGAGGGGGAGAAGGCGAGAATCCAAGAC AAGAGCGAGCATGGAGTTTGCTACGGGTGCCATGGGTACCCTCCTCCCCAAGCTGGGCAT GCTGCTGCAGGAAGAACTCCACCTGAAGAATAATGTGAAGGAGGGGATCAAGAGCCTCAC TGCCGAGCTTGAGAGCATGCAAGCTGCACTTGTGAAGGTGTCTGACGTGCCATTAGACCA GCTTGACCCAAACGTCAAGATTTGGGCTAATGAAGTCAGGGGGCTGTCCTATGATATTGA GGACAGACTCGACTCCTTCAAGGTGCGCATGGAGGGTCTTGATTCAACCAAGCGCAAAAC CATCATGGGATTCATCCAACAAACCCGTGGCTTGGTCACCAAGTTCAAGATTCGCCATGT AATATTTGATGACATTAAAGACTTCGGGAGCCAAGTAAAGGAGGTGAAGGAGCGGTATGA CAGGTACAAGGTGCATGATGTTGTAGCTAATCCTATCGCAACCACAGTTGACCCTCGTCT CTTGGCTATGTATAACAAGGTTTCCGACCTTGTTGGCATTGACGAAGAAGCTAAGGAGCT AATGAATAATTTGTTTGAAGATGGTGACGAGCCAGCGAAAAAGATCAAGACAGTCTCTGT TGTTGGATTTGGAGGACTCGGCAAGACTACTCTTGTTAAAGCAGTCTATGACAAGGTTAA GAAGGAGTTTGATTGCAGTGCTTTTGTATCAATAGGTCAGAAATGTGATCTCAAGAAAGT TTTCAAGGACGTTCTTTATGATCTTGACAAGCAAAATCATGAAAATATCATTGCATCAGA AATGGATGAAAAACAACTCATTGATAAGCTACAGGAATTCCTTGCAGACAAGAGGTACTT GGTTGTTATTGATGACATATGGGATATATCAACATGGAAGCTGATTAGATGTGCTTTGGT GGAAAGTAACCCTGGAAGTAGAATAATCATAACTACTCGCATTTGTGAAGTTGCCAAAAA GGTTGGTGGTGTTTACAACAAGAAACCACTCTCTCTTGATGACTCCAAGACATTATTCTA TACTAGAGTATTTGCTGGTGAAAGCATGAGTCTTGATAACATATCTGGTGAAGTGTGCAA CAAAATCCTAAGAAAATGTGGTGGTGTGCCATTGTCCATCATTACGATAGCTAGTCTGCT TGTTGGTAAACAGAGGGAGGACTGGTCTAAGGTGTATGATTATATTGGTTTTGGGCATGA AGATAACGAGGTTATTGGGAACATGAGAAAGATATTAGCTTTCAGCTATTACAATCTACC TCCTTATCTAAAGACATGCTTATTGCACCTAAGCATATTTCCAGAAGATCACAAGATTGA GAAAAATTCATTGATATGGAGGTGGATAGCTGAAGGTTTTGTTATTGGCAGAGAAGAACT AGGGTTATTTGAGGTTGGAGAGAGCTATTTCAATGAGCTCATAAATAGAAGCATGATCCG GTGGATAGAGCTCTCTAGTAGAAGCAAGATTCGAGATGGTTGTGGTATTCATGATATGGT GCTTGATCTTATCCGCACTTTGTCAGGTGAAGTAAACTTGGTCACGGTATCAGATGTGGA GCAGCAGTGTACCACATCATCATCATATTCACCAGTCAGAAGCATTAGCGCTCGAAGATT AGCCTTCCACAAAAAAAGAAGCATTGAACACAACCCTGGCACAGAAATAGGACAGGTGAG ATCATTCAATGCTTTCAACTGCTCTGGTAGTAGGATGCCCCGACTTTTAAGCTTCAGGGT CTTACGTGTACTAGCTCTGGAGAACTGTAATTTCTCAGCAGGAAACTGTTGCCTTGGAAA TATTGGCAAATTGCATCAGCTGAGGTACCTAGGGCTAGTGGAGACATCCATTCGTGACGA CTTGCTGCCTGGAGAAACAGGACACCTCAAGTTTCTGCAGACACTAGATGTAAGACGAAG TGGCATAAAAATATTGCCAGCGTCTGTTGGTGAGCTAATGAAACTGATGTGCCTGCGTGC TACCGAGGGCACAAGGATGATGGCCGAGATTGGGAAGCTGGCGTCACTGGAAGAGCTTGA GGTACACTCTGTGGACAAGTCGCCAAACTTCGCCACGGGGCTGGGGCAGCTAACCAAGGT GAGGGTGCTTGAGATCCATTTCGACGAAATGGACGAGAGCACAGAGAAGGCTCTCATGGA GTCCCTGCGCAACCTGCGGAAAATCCAGAGTCTGCAGATATGGTCCAAGAAGGAGAGGAC AATTGACCTTGGCGGCTTGTTGGAAGACTGGACGCCAACCCCTTCAGATCTCCGTCAACT GATGCTGTGTGGCATCCATTTGCCCAGGCGTCCGTCATGGATTGATCCCTCATGTGTCCC GCTCCTCTCGTACTTGTCGCTCACGGTCCAGGCCGTGCAAGTGCAGGATCTAGAAATCCT CGGGAGGCTGCCGTTGCTCAGCTACCTCTACATCTGGAGTGAGGGCATCAACTGCTTATC CTATACTGCTACCAGCAGAGACGAGTTTCAGAATCTGAGACATCTGGACACAAACCTGGA GATCATGTGTGGACAGCAGGGAGCACTGCCTATGGTTGAGAAGTTGACATGCCGTGCCAG CATGGGGAAGTATGTTGCCTTTGCCAGGAGCAGCATGCCTTTCGACGATGGCAGCGTGGT GAATCCTGCTACTGTTGCTGAGGCAGAATTGCCAGTAATTCTACCTTTGGACATTGGCTG GCCCGTGAACATGCCTTGCCTCCGGGGCATCACCTATTTGCTGGATTACCAGGACTGCAG TGCCAAGGAGTGGGCTCATGTGGAGACATTGCTCTTGCACGTGAGAAAAATCCACCCCAA CTGTCCACCCTTCCGAATCAAAAAGAACTGCAGAGACAAGAAGATTACCTTGATCGACGC ATTCAGCTACCTTGAAGCTGTCAAGGATGTGTTCAAGGGCAACCCCTCCAAATACTCGGA GTTTTTTGATCTCATGATTGATTACAAGAGAGACAGAATCAAAATCAAAGATGTGATCAT CCGTCTCAAGACCCTATTTACTGGACATGATCCTAATCTCATCCTTGACTTCAGCGTCTT CCTGCCCAGGGAGTGGGCCATCACTCTCGGGGACCTGTAGAAGAAGCCCCTTCATGATCG ATTCTAGCTAGGCCATCACCCATTTAGTTAACAAGACCAAGGTTTCATTTAAACAAGCTA GCTAGTTCTTTTCATGTACTACTAGTTCCTAATGCCTTTGTTGTAATTTTTCCAGTCGGG ATGACGGCGATGGATCTGATCATGTTACCGGCACAAATGGCGAAGAAGAGGACGATACCC ATGAAGCGTAATATGCAATCCCTGTCACCAGTGGAGGATCTTTGCTTCAGTTAATTCATT GTCAAGGATAATCTTGTTTACTTAGTCGTTGTGCTTAGGGCCTGTTTATTTAGGGTGTGT TTGGTTTGACTTTTGGCTTTTGGCTTTTGCCCCCTAAAAGCCAAAAGCCAACCAAAGGGT TGGATCTAAGAAGCAGCTTTTTCTAAAAGCTGACTTTCTCACAGTGCAAATCTGAAAGCA CACCTGAACCTGCTTTT