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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004763_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:137365815:137367470:1 gene:Zm00001d004763 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable glucan endo-13-beta-glucosidase A6
Sequence

ATGGCGGTGTCACAACTCCATCTCGTGGTGATGGTGATCCTAGTATCAGCAGTAGCATCT
GCTCCCGCAGTAGCAGCGCAGTACCTGGGCGTCAACTACGGCACACTGGGCGACAACCTC
CCGCCGCCGCACCGCGGGATGGAGCTGGCCCGCTCGGCGGGGGCCGTCTCTGTCCGCTTC
TACGACGCCAACGCGACCCTCCTGGCGGCGGCCGCGGCGTCCGGCCTCGACTTCGTGCCG
AGCTTCCCCAACGAGCTCATCCCGTCTCTCGCCGGCTCCCAGCGCGCCGCCGACGCATTG
GTGGCCGCCACGCTGCTCCCGTTCCGCGGCAACCCACGCCTCCGCTACCTCTTCGTCGGC
AACGAGTTCCTCTCCAACCCGACCGCCAAGCCCAACTGGGCGCTGATCGTCCCCGCCATG
ACCAACGCCGCCAGGGCGCTGCGCCGCCACGGCCTCGCGCACGTGAAGGTGAGCACCACG
CTCAGCATGAACGACCTCGGCAACACCGTGCTCCCGCCGTCGGCCGGCGCGTTCCGGCCG
GAGATCGCCGAGGCCGTGATGGGCCCGATGCTGGCCTTCCTGCAGCGCACAGGCTCCTGC
CTGTTCCTGGACGCCTACACCTACTTCACCTGGTCGGCGAACCACACCATCTTCCCGCTG
CCCTACGCGCTGCTGGAGCCGTCGCCGGGGTTCGCGTACCACGACCCCGGCACGGGGCTC
TCGTACGCCAACCTCCTGGACCAGATGCTGGACACGGCGGCGGCCGCCATGTGCCGCCTG
GGCTACTGCGGCGTGGGTCTGGCGCTGGCCGAGACCGGGTGGCCCACGGCGGGCGACCTG
GACCAGTTCGGCGCCAACGTGCGGAATGCGGCCACGTACAACCGCAACCTGGCGCGGCGC
CTGGCGTCCGGGGCCGGCACGCCGCGGCGGCCCGGGGTGCCGGTGCCGGCGATGGTGTTC
GCGCTGTTCAACGAGGACCTCAAGTGGGGGCCCGACACGGAGCGGCACTGGGGCCTGTTC
TACCCCAACGGCAGCGCGGTGTACGAGGTGGACCTCACGGGGCGCCGCCCGCTGGCGTCG
TACCCGCCGCTGCCGCCGGCGACGAACGACCAGCCGTACCGGGGCCCCCTGTGGTGCGTG
GTGAGGACGGCGGGCATTAACGAGACGGCGGTGAGGGAGCAGGTGGCGGCGGTGTGCGAC
GACGACGAGGCCGAGGATGCGCTGTGCGACCCCGTGCGGCCCGGCGGCGCGTGCTTCCTG
CCCAACACGGTCGCCGCGCACGCCAGCTACGTCTTCAGCGCGCACTGGAACAGGTTCAGC
GAGGACTACGGAGCCTGCTACTTTGACGGCTGGGGCATGGAGACCACCATCGATCCCAGC
CATGGATCATGCAAATTTCCAAGCATCCATCTCAAATAA

Peptide Sequence

PEP ID

Zm00001d004763_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:137365815:137367470:1 gene:Zm00001d004763 transcript:Zm00001d004763_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable glucan endo-13-beta-glucosidase A6
Sequence

MAVSQLHLVVMVILVSAVASAPAVAAQYLGVNYGTLGDNLPPPHRGMELARSAGAVSVRF
YDANATLLAAAAASGLDFVPSFPNELIPSLAGSQRAADALVAATLLPFRGNPRLRYLFVG
NEFLSNPTAKPNWALIVPAMTNAARALRRHGLAHVKVSTTLSMNDLGNTVLPPSAGAFRP
EIAEAVMGPMLAFLQRTGSCLFLDAYTYFTWSANHTIFPLPYALLEPSPGFAYHDPGTGL
SYANLLDQMLDTAAAAMCRLGYCGVGLALAETGWPTAGDLDQFGANVRNAATYNRNLARR
LASGAGTPRRPGVPVPAMVFALFNEDLKWGPDTERHWGLFYPNGSAVYEVDLTGRRPLAS
YPPLPPATNDQPYRGPLWCVVRTAGINETAVREQVAAVCDDDEAEDALCDPVRPGGACFL
PNTVAAHASYVFSAHWNRFSEDYGACYFDGWGMETTIDPSHGSCKFPSIHLK

Transcript Sequence

Transcript ID

Zm00001d004763_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:137365815:137367470:1 gene:Zm00001d004763 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable glucan endo-13-beta-glucosidase A6
Sequence

CTCCGTCCAACGGCCGGCAGCTCACTCAGCAGCGTCAGCAGCCATGGCGGTGTCACAACT
CCATCTCGTGGTGATGGTGATCCTAGTATCAGCAGTAGCATCTGCTCCCGCAGTAGCAGC
GCAGTACCTGGGCGTCAACTACGGCACACTGGGCGACAACCTCCCGCCGCCGCACCGCGG
GATGGAGCTGGCCCGCTCGGCGGGGGCCGTCTCTGTCCGCTTCTACGACGCCAACGCGAC
CCTCCTGGCGGCGGCCGCGGCGTCCGGCCTCGACTTCGTGCCGAGCTTCCCCAACGAGCT
CATCCCGTCTCTCGCCGGCTCCCAGCGCGCCGCCGACGCATTGGTGGCCGCCACGCTGCT
CCCGTTCCGCGGCAACCCACGCCTCCGCTACCTCTTCGTCGGCAACGAGTTCCTCTCCAA
CCCGACCGCCAAGCCCAACTGGGCGCTGATCGTCCCCGCCATGACCAACGCCGCCAGGGC
GCTGCGCCGCCACGGCCTCGCGCACGTGAAGGTGAGCACCACGCTCAGCATGAACGACCT
CGGCAACACCGTGCTCCCGCCGTCGGCCGGCGCGTTCCGGCCGGAGATCGCCGAGGCCGT
GATGGGCCCGATGCTGGCCTTCCTGCAGCGCACAGGCTCCTGCCTGTTCCTGGACGCCTA
CACCTACTTCACCTGGTCGGCGAACCACACCATCTTCCCGCTGCCCTACGCGCTGCTGGA
GCCGTCGCCGGGGTTCGCGTACCACGACCCCGGCACGGGGCTCTCGTACGCCAACCTCCT
GGACCAGATGCTGGACACGGCGGCGGCCGCCATGTGCCGCCTGGGCTACTGCGGCGTGGG
TCTGGCGCTGGCCGAGACCGGGTGGCCCACGGCGGGCGACCTGGACCAGTTCGGCGCCAA
CGTGCGGAATGCGGCCACGTACAACCGCAACCTGGCGCGGCGCCTGGCGTCCGGGGCCGG
CACGCCGCGGCGGCCCGGGGTGCCGGTGCCGGCGATGGTGTTCGCGCTGTTCAACGAGGA
CCTCAAGTGGGGGCCCGACACGGAGCGGCACTGGGGCCTGTTCTACCCCAACGGCAGCGC
GGTGTACGAGGTGGACCTCACGGGGCGCCGCCCGCTGGCGTCGTACCCGCCGCTGCCGCC
GGCGACGAACGACCAGCCGTACCGGGGCCCCCTGTGGTGCGTGGTGAGGACGGCGGGCAT
TAACGAGACGGCGGTGAGGGAGCAGGTGGCGGCGGTGTGCGACGACGACGAGGCCGAGGA
TGCGCTGTGCGACCCCGTGCGGCCCGGCGGCGCGTGCTTCCTGCCCAACACGGTCGCCGC
GCACGCCAGCTACGTCTTCAGCGCGCACTGGAACAGGTTCAGCGAGGACTACGGAGCCTG
CTACTTTGACGGCTGGGGCATGGAGACCACCATCGATCCCAGCCATGGATCATGCAAATT
TCCAAGCATCCATCTCAAATAAGAAATATATATATCATGATGATATATAGTGGAGAACCG
GCTCAAATTTCCACGGATCACTGAGCTTGTTCACCGAGTTATCGTGCTCATTTATCCCAA
TTAATAAATGCA