Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d004751_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:136241469:136248634:1 gene:Zm00001d004751 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-tyrosine-phosphatase PTP1
Sequence	ATGACATTGATGGTAGGCCTGGGCCCACCACTGCTGGCGGTTTCGAATCCAGTGAGCGGC TTTACTTTTCCGTTGCGTGTATCCTCTCGGCTCTCGCCTCGCCGAGTCGCCGTCGAGTCC GCCATTCCATTCACCCCGGTTCCCCTCCCGTGCAACCGCGAGCAGAAGCCACCATTTCAA AACGAGGACGAGCCCGCTGCTGGTGCTGTCCCTTCCCGCGCGCCGCCGGCGCCTGGCCAC CTGCTCCGCGTCGGATCTAGAGCGAGCGAGCGTCACCCGCGGCTCTCGTCGCCGTCAGCG TCACCCACCCGTCGTCTTCTTGCCTCCGAAGTCAAATCTTCCACCCCATATCACCACAGA GAATTCCAACCCATCCACTTCCGCGGCCTGCTGCCGTCCGCTTTATTTAAACCGTCCGCC ACGGCGACCCCGACGACTCCCCCCGCGGCCTCTCCCGCCAGCTCCCCCTCACCCCCGACC ATCCACGCCTCCAAGCGCCGCCGCCGCGAGACCGAAGCCACGGGGAACACGCCGCTGAGG GGTGGCAGGGGCCCCGCCCCTCGCCGCCGCTCGTCGACTCCGCCTCCTCTTTCTCTGCCG GCGGCGGAGTTTGACCCGCTCGACCCGGACGCTGACCCGCCCCCCAAGCTGCTCACGGCC GACGAGGTGAGGCTCTGCAAGCAGGCGCTGAAGGCGCTCGACAAGAAGGTCGGGAAGCCC GCCACGCTTACCAAGGAGTTTCGTAGCCTCCCGGATATAAGAACAGAGCTTCAGTCAGTG CAAAAATTTAGTGTTGCTCGGAAACAAGAAAATAGGGGAAGAAACCGCTATACTGATGTG TTGCCATTTGATCAAAGCAGGGTACAGTTAGAGTCTTCAACAGGCAATGATTACATCAAT GCCAGCCATATAGAGATTGCTGGCAGAAATCTAACGAAGTTCATTTCTACTCAAGGACCA CTTGCCAATACAATTGAGGATTTTTGGCAGATGGTATATGAGAACCACTGTCCTGTGATT GTTATGCTCACCAAATTTGATGGTCTTAAGTGTGATGAGTATCTACCATTGAGCAAGGGA CAGGCTGTTTTTGGAAAATTTACCATTAAGATCACAAAGTTCAGGAAAGATGGTCAGTTA TTGTTGCGTGGTGTGGAGATTCGACAGGATGAGTCAGATGAAGTGCGATCTCTTCTCCAC ATTGAGTATCCGGAGTGGCCTGACCATGGGGTGCCAAACAGCAGTGCTGATGTAAGAAGA ATTCTAAAAAGATTGTATCACATTCCAAGAGAGAGGCCAATAGTTGCACATTGCAGCGCA GGCATTGGAAGAACAGGTGCTTATACCACCATCCATAATACAATAGAGAGGATTTTACTT GGAGAACAGGGGGCTGCTGATCTTGTTGAAACTGTCAAAAAATTTAGATCACAGCGACCT GGAATGGTCCAAACAGAGGAGCAATACAAATGTTGCCACCATGCAATCAGAGATGAACTG GAAGATCTTGTATCGAGTTCAAAAATTGAGCCGCTTTCGAGGAACGGGTAA

Peptide Sequence

PEP ID	Zm00001d004751_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:136241469:136248634:1 gene:Zm00001d004751 transcript:Zm00001d004751_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-tyrosine-phosphatase PTP1
Sequence	MTLMVGLGPPLLAVSNPVSGFTFPLRVSSRLSPRRVAVESAIPFTPVPLPCNREQKPPFQ NEDEPAAGAVPSRAPPAPGHLLRVGSRASERHPRLSSPSASPTRRLLASEVKSSTPYHHR EFQPIHFRGLLPSALFKPSATATPTTPPAASPASSPSPPTIHASKRRRRETEATGNTPLR GGRGPAPRRRSSTPPPLSLPAAEFDPLDPDADPPPKLLTADEVRLCKQALKALDKKVGKP ATLTKEFRSLPDIRTELQSVQKFSVARKQENRGRNRYTDVLPFDQSRVQLESSTGNDYIN ASHIEIAGRNLTKFISTQGPLANTIEDFWQMVYENHCPVIVMLTKFDGLKCDEYLPLSKG QAVFGKFTIKITKFRKDGQLLLRGVEIRQDESDEVRSLLHIEYPEWPDHGVPNSSADVRR ILKRLYHIPRERPIVAHCSAGIGRTGAYTTIHNTIERILLGEQGAADLVETVKKFRSQRP GMVQTEEQYKCCHHAIRDELEDLVSSSKIEPLSRNG

Transcript Sequence

Transcript ID	Zm00001d004751_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:136241469:136248634:1 gene:Zm00001d004751 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-tyrosine-phosphatase PTP1
Sequence	ATGACATTGATGGTAGGCCTGGGCCCACCACTGCTGGCGGTTTCGAATCCAGTGAGCGGC TTTACTTTTCCGTTGCGTGTATCCTCTCGGCTCTCGCCTCGCCGAGTCGCCGTCGAGTCC GCCATTCCATTCACCCCGGTTCCCCTCCCGTGCAACCGCGAGCAGAAGCCACCATTTCAA AACGAGGACGAGCCCGCTGCTGGTGCTGTCCCTTCCCGCGCGCCGCCGGCGCCTGGCCAC CTGCTCCGCGTCGGATCTAGAGCGAGCGAGCGTCACCCGCGGCTCTCGTCGCCGTCAGCG TCACCCACCCGTCGTCTTCTTGCCTCCGAAGTCAAATCTTCCACCCCATATCACCACAGA GAATTCCAACCCATCCACTTCCGCGGCCTGCTGCCGTCCGCTTTATTTAAACCGTCCGCC ACGGCGACCCCGACGACTCCCCCCGCGGCCTCTCCCGCCAGCTCCCCCTCACCCCCGACC ATCCACGCCTCCAAGCGCCGCCGCCGCGAGACCGAAGCCACGGGGAACACGCCGCTGAGG GGTGGCAGGGGCCCCGCCCCTCGCCGCCGCTCGTCGACTCCGCCTCCTCTTTCTCTGCCG GCGGCGGAGTTTGACCCGCTCGACCCGGACGCTGACCCGCCCCCCAAGCTGCTCACGGCC GACGAGGTGAGGCTCTGCAAGCAGGCGCTGAAGGCGCTCGACAAGAAGGTCGGGAAGCCC GCCACGCTTACCAAGGAGTTTCGTAGCCTCCCGGATATAAGAACAGAGCTTCAGTCAGTG CAAAAATTTAGTGTTGCTCGGAAACAAGAAAATAGGGGAAGAAACCGCTATACTGATGTG TTGCCATTTGATCAAAGCAGGGTACAGTTAGAGTCTTCAACAGGCAATGATTACATCAAT GCCAGCCATATAGAGATTGCTGGCAGAAATCTAACGAAGTTCATTTCTACTCAAGGACCA CTTGCCAATACAATTGAGGATTTTTGGCAGATGGTATATGAGAACCACTGTCCTGTGATT GTTATGCTCACCAAATTTGATGGTCTTAAGTGTGATGAGTATCTACCATTGAGCAAGGGA CAGGCTGTTTTTGGAAAATTTACCATTAAGATCACAAAGTTCAGGAAAGATGGTCAGTTA TTGTTGCGTGGTGTGGAGATTCGACAGGATGAGTCAGATGAAGTGCGATCTCTTCTCCAC ATTGAGTATCCGGAGTGGCCTGACCATGGGGTGCCAAACAGCAGTGCTGATGTAAGAAGA ATTCTAAAAAGATTGTATCACATTCCAAGAGAGAGGCCAATAGTTGCACATTGCAGCGCA GGCATTGGAAGAACAGGTGCTTATACCACCATCCATAATACAATAGAGAGGATTTTACTT GGAGAACAGGGGGCTGCTGATCTTGTTGAAACTGTCAAAAAATTTAGATCACAGCGACCT GGAATGGTCCAAACAGAGGAGCAATACAAATGTTGCCACCATGCAATCAGAGATGAACTG GAAGATCTTGTATCGAGTTCAAAAATTGAGCCGCTTTCGAGGAACGGGTAACGCTAGCAG TGATGTTCTACTGACCTATCTGACAGCGTGATACCTCTTTACTTGCTCCATTCTTCAAGC TTCGGCGATAGCCGTTATGAACATCATGACTTCTGAAATGTTGCGTTTTATCTGGAGTTT TAAAGCCTTTACAACATTCTTCAACCTTCTATGATCTAACATTCATTGTGGTGTATGCAT GAAATTAGAATTTAGATTGATGATATATTATTGATTGTGCCCGCCCCCACACCCCCACAG ATTGTATTTTTGGTTAATGGTGTATGCATGAAATATGATGCACAGGAAAGATTTG