Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004716_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:2:133451639:133457487:-1 gene:Zm00001d004716 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD kinase 2 chloroplastic
Sequence

ATGCTCGACGTCTGCGCGCCACACGGGCCCGCCAAGCTCCCGGCTGCGTTTGTCGCCGGC
GTGCGAGTCGCCTGGGTCGCCGGCAGGTGGTGGTGGCGATCCGTGGCGGTGGGGGCGGCG
CGCCATGGCGTCACCACGCGGGCGTCGTTCTTCGGGCTCGATTCCCAGAATTTTCAGACA
AGGGACCCGTCCCAGTTGTTGTGGATCGGTCCGGTGCCTGGTGACATCGCGGAGATTGAG
GCCTACTGCCGCATATTCCGTGCTGCCGAGCAGCTCCACACCGCAGTTATGTCAGCACTT
TGTGATCCAGAGACAGGAGAGTGTCCTGTACGCTATGATGTGGAATCAGAGGATCTGCCA
ATCCTGGAAGACAAGGTCACTGCCGTCCTTGGTTGCATGCTGGCGTTGCTGAACCGGGGA
AGGAATGAGGTGCTCTCAGGGAGATCAGGTGTTGCAAGTGCTTTCCATGGATCTGTGGAC
AGCACCTCTGATATGATCCCACCACTCACCTTGTTCCGTGGAGACATGAAGCGTTGCTGT
GAGAGTATGCAGCTGGCACTTGCCAGCTACCTTGTACCGAGTGAGCCCAGGGGGTTGAAT
ATATGGAGGAAGCTGCAGAGATTGAAGAACGCTTGTTACGATGCAGGTTTCTCAAGGCCT
GATGGTTATCCATGTCCGACATTATTTGCGAATTGGTTTCCGGTGTACCTTTCGATTGTG
TCAGATGATTCAGGAACAGATGAGCCCGAGGTTGCATTTTGGAGGGGAGGGCAAGTCAGT
GAGGAGGGGCTGGCATGGCTACTAGAAAAGGGATTCAAAACTATTGTTGATCTCCGGGAA
GAAGATGTTAAAGATGATTTGTACCTTTCAGCAGTTCAGGAGGCTGTCTCATCTGGGAAG
ATAGAGGTGGTGAATATGCTGGTTGAGATCGGAACTGCACCATCAGCTGAACAGGTTAAA
CAATTTGCAGCTCTTGTGTCAGATGGCGCAAAGAAGCCCATTTATCTCCATAGCAAAGAA
GGTGTTTCTAGGACGTCTGCAATGGTCTCAAGATGGAAACAATATGTTACTCGTTCAGAG
AGATTGGCTGTCCAAAATCACTATATAAATGGGAATGGTAAGGTCCTGACAAGTGACAAG
ACCAAGCAGCACACGGGCAGCCCAAGCTCCTCTATGAATCGAACTGAAATTGGTATGGTA
ACGGAATCTGATAGGACCATGAACAATGGAGAATCATGTGAGATAGACATAGAGACAGCT
CGTCATAATCTGGAGGTCACTAATGCCCTTTCCGATGACCAAAGTACTCAACAAGGTGAA
ATGCTTGGGACTGGGACAGAACCCTTGTCAAACTTTAAACTGGAGAGTAACCCCCTTAAA
GCACAATTTCCTACTTGTGATATTTTCTCTAGAAAAGAGATGAGCAAGTTTTTTAGAAGC
AAAAAGGTTTATCCAAAATCTGTTCTGAACTCAAGGAGACAATCAAGTAGCTTGCTGGTC
TCAAGGAGAAAACAAAATTTCAGCACAGAGCGTAATGGAACCATTGACTATGAAGCAGCA
GAGTTCACAATTTTAGAAAGTTCAAATGGAACATCATTTGACAATGATTATATTCTATCA
GTTTCTTCAGGTATCACTGATGGAAAACCTTCCAACAATGGAGCCTTTTCGTTAATTGAG
AAAAAGGAAAGGGAAGTTTCAGTCACTACTTTTGATACTAGAGCATCGGCGAGCAGTTCT
AATGGAAAGGTTCAGGTTGGATCACAAAAAACTGCTGAAAAGAATGGTACCCCTTATCTG
GAGAGAAACAATTCAAATAATGTTGATGGAAGTATGTGTGCATCTGCAACTGGTGTCGTT
AGACTCCAGTCGAGAAGAAAAGCAGAGATGTTTCTGGTACGTACTGATGGATTTTCTTGT
ACTAGAGAAAAAGTAACAGAATCATCTCTGGCTTTTACACATCCTAGTACCCAGCAACAG
ATGCTTATGTGGAAATCTCCTCCAAAGACTGTCTTACTTTTGAAGAAATTAGGCGATGAG
CTGATGGAAGAAGCTAAAGAGGTTGCTTCATTTCTGCATCATCAAGAAAAAATGAATGTT
CTTGTGGAACCTGATGTTCATGATACATTTGCTAGAATTCCAGGTTATGGTTTTGTGCAA
ACCTTCTATACTCAAGATACCAGTGACCTTCATGAGAGAGTTGATTTTGTTACATGCTTG
GGTGGTGATGGACTCATTTTGCATGCATCAAACTTATTTAGAACTTCTGTACCACCTGTT
GTCTCCTTCAATCTCGGATCTCTTGGGTTCTTAACTTCACATAATGTACATTTCAATAAT
CTCTGA

Peptide Sequence

PEP ID

Zm00001d004716_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:2:133451639:133457487:-1 gene:Zm00001d004716 transcript:Zm00001d004716_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD kinase 2 chloroplastic
Sequence

MLDVCAPHGPAKLPAAFVAGVRVAWVAGRWWWRSVAVGAARHGVTTRASFFGLDSQNFQT
RDPSQLLWIGPVPGDIAEIEAYCRIFRAAEQLHTAVMSALCDPETGECPVRYDVESEDLP
ILEDKVTAVLGCMLALLNRGRNEVLSGRSGVASAFHGSVDSTSDMIPPLTLFRGDMKRCC
ESMQLALASYLVPSEPRGLNIWRKLQRLKNACYDAGFSRPDGYPCPTLFANWFPVYLSIV
SDDSGTDEPEVAFWRGGQVSEEGLAWLLEKGFKTIVDLREEDVKDDLYLSAVQEAVSSGK
IEVVNMLVEIGTAPSAEQVKQFAALVSDGAKKPIYLHSKEGVSRTSAMVSRWKQYVTRSE
RLAVQNHYINGNGKVLTSDKTKQHTGSPSSSMNRTEIGMVTESDRTMNNGESCEIDIETA
RHNLEVTNALSDDQSTQQGEMLGTGTEPLSNFKLESNPLKAQFPTCDIFSRKEMSKFFRS
KKVYPKSVLNSRRQSSSLLVSRRKQNFSTERNGTIDYEAAEFTILESSNGTSFDNDYILS
VSSGITDGKPSNNGAFSLIEKKEREVSVTTFDTRASASSSNGKVQVGSQKTAEKNGTPYL
ERNNSNNVDGSMCASATGVVRLQSRRKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQ
MLMWKSPPKTVLLLKKLGDELMEEAKEVASFLHHQEKMNVLVEPDVHDTFARIPGYGFVQ
TFYTQDTSDLHERVDFVTCLGGDGLILHASNLFRTSVPPVVSFNLGSLGFLTSHNVHFNN
L

Transcript Sequence

Transcript ID

Zm00001d004716_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:133451639:133457487:-1 gene:Zm00001d004716 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD kinase 2 chloroplastic
Sequence

GTGACAATCCAGTCAATTATGATCTCTAGCCCCCCTCCTTCCGGCTCCTGTCATCCTGCG
CATGCCATCGGGGCGCTCGCCGGGACAACATTTACCTCGACAGCGACGCCGCCGCTCTCC
CTCGACGAGAGCTCGTAGCTGTGTCCGCGCAAGGCTTACTCCTTTCTTGGCCCCGACCCC
TTCTCCCCGCCGCCGGCGCCGCGCTTGGCTTGATGCTCGACGTCTGCGCGCCACACGGGC
CCGCCAAGCTCCCGGCTGCGTTTGTCGCCGGCGTGCGAGTCGCCTGGGTCGCCGGCAGGT
GGTGGTGGCGATCCGTGGCGGTGGGGGCGGCGCGCCATGGCGTCACCACGCGGGCGTCGT
TCTTCGGGCTCGATTCCCAGAATTTTCAGACAAGGGACCCGTCCCAGTTGTTGTGGATCG
GTCCGGTGCCTGGTGACATCGCGGAGATTGAGGCCTACTGCCGCATATTCCGTGCTGCCG
AGCAGCTCCACACCGCAGTTATGTCAGCACTTTGTGATCCAGAGACAGGAGAGTGTCCTG
TACGCTATGATGTGGAATCAGAGGATCTGCCAATCCTGGAAGACAAGGTCACTGCCGTCC
TTGGTTGCATGCTGGCGTTGCTGAACCGGGGAAGGAATGAGGTGCTCTCAGGGAGATCAG
GTGTTGCAAGTGCTTTCCATGGATCTGTGGACAGCACCTCTGATATGATCCCACCACTCA
CCTTGTTCCGTGGAGACATGAAGCGTTGCTGTGAGAGTATGCAGCTGGCACTTGCCAGCT
ACCTTGTACCGAGTGAGCCCAGGGGGTTGAATATATGGAGGAAGCTGCAGAGATTGAAGA
ACGCTTGTTACGATGCAGGTTTCTCAAGGCCTGATGGTTATCCATGTCCGACATTATTTG
CGAATTGGTTTCCGGTGTACCTTTCGATTGTGTCAGATGATTCAGGAACAGATGAGCCCG
AGGTTGCATTTTGGAGGGGAGGGCAAGTCAGTGAGGAGGGGCTGGCATGGCTACTAGAAA
AGGGATTCAAAACTATTGTTGATCTCCGGGAAGAAGATGTTAAAGATGATTTGTACCTTT
CAGCAGTTCAGGAGGCTGTCTCATCTGGGAAGATAGAGGTGGTGAATATGCTGGTTGAGA
TCGGAACTGCACCATCAGCTGAACAGGTTAAACAATTTGCAGCTCTTGTGTCAGATGGCG
CAAAGAAGCCCATTTATCTCCATAGCAAAGAAGGTGTTTCTAGGACGTCTGCAATGGTCT
CAAGATGGAAACAATATGTTACTCGTTCAGAGAGATTGGCTGTCCAAAATCACTATATAA
ATGGGAATGGTAAGGTCCTGACAAGTGACAAGACCAAGCAGCACACGGGCAGCCCAAGCT
CCTCTATGAATCGAACTGAAATTGGTATGGTAACGGAATCTGATAGGACCATGAACAATG
GAGAATCATGTGAGATAGACATAGAGACAGCTCGTCATAATCTGGAGGTCACTAATGCCC
TTTCCGATGACCAAAGTACTCAACAAGGTGAAATGCTTGGGACTGGGACAGAACCCTTGT
CAAACTTTAAACTGGAGAGTAACCCCCTTAAAGCACAATTTCCTACTTGTGATATTTTCT
CTAGAAAAGAGATGAGCAAGTTTTTTAGAAGCAAAAAGGTTTATCCAAAATCTGTTCTGA
ACTCAAGGAGACAATCAAGTAGCTTGCTGGTCTCAAGGAGAAAACAAAATTTCAGCACAG
AGCGTAATGGAACCATTGACTATGAAGCAGCAGAGTTCACAATTTTAGAAAGTTCAAATG
GAACATCATTTGACAATGATTATATTCTATCAGTTTCTTCAGGTATCACTGATGGAAAAC
CTTCCAACAATGGAGCCTTTTCGTTAATTGAGAAAAAGGAAAGGGAAGTTTCAGTCACTA
CTTTTGATACTAGAGCATCGGCGAGCAGTTCTAATGGAAAGGTTCAGGTTGGATCACAAA
AAACTGCTGAAAAGAATGGTACCCCTTATCTGGAGAGAAACAATTCAAATAATGTTGATG
GAAGTATGTGTGCATCTGCAACTGGTGTCGTTAGACTCCAGTCGAGAAGAAAAGCAGAGA
TGTTTCTGGTACGTACTGATGGATTTTCTTGTACTAGAGAAAAAGTAACAGAATCATCTC
TGGCTTTTACACATCCTAGTACCCAGCAACAGATGCTTATGTGGAAATCTCCTCCAAAGA
CTGTCTTACTTTTGAAGAAATTAGGCGATGAGCTGATGGAAGAAGCTAAAGAGGTTGCTT
CATTTCTGCATCATCAAGAAAAAATGAATGTTCTTGTGGAACCTGATGTTCATGATACAT
TTGCTAGAATTCCAGGTTATGGTTTTGTGCAAACCTTCTATACTCAAGATACCAGTGACC
TTCATGAGAGAGTTGATTTTGTTACATGCTTGGGTGGTGATGGACTCATTTTGCATGCAT
CAAACTTATTTAGAACTTCTGTACCACCTGTTGTCTCCTTCAATCTCGGATCTCTTGGGT
TCTTAACTTCACATAATGTACATTTCAATAATCTCTGAGAGAGAATTTCACCAGATTAAG
CCGTTTTTGTGTAGAAACTAAGCATATTATCATTTTGTTCACCTCAGTTCAAAGATTTCA
GACAAGACTCGAGAGATTTAATCCATGGGAACAACACACTTGGAGTTTATATAACCCTTA
GAATGCGCCTAAGATGTGAGATCTTTCGTAGTGGAAAAGCAATGCCTGATAAAGTGTTTG
ATGTGCTGAATGAAGTTGTTGTTGATCGAGGTTCCAATCCATACCTATCAAAAATTGAGT
GTTATGAGCATAACCACCTTATCACTAAGGTATGATTCAGAAAGTCCTGAAAAAGATGTA
TCTCTTTCTCTTTGCATCTTGTCACTTGGTGATTCTATGCAACTGTGTATCATTTTCTTA
TATATACTTCTGCTTTGTAATTCAATAGTTTTAGTCATGATGTTAAACCTCTTTTATCAA
CTGTATTATGCCTAACCAAGCAAACAGCTGCATTGAACTATAGAAGGCATAATTACCATT
TTTCTTTCACTATTCATATGGTTGTTTTCTAAAAATATTATGTGATGATAATTTATATCT
GTATTAACTTTACATTCCAACTTTCAAGTTTTCTCCAAGTTAAATGTCTTTAGTTAGTAG
TTACTGCGTACTTTCTTGCATAATATATTGAATGCACGAACTGGTTGCTACCAGCTAATG
GTTGGAATACTAATTTAGATACACTTTGAGCCGACCTGCTAAGTTAACCCTCCTACTCCT
GAAGATTATAATTATTCTGTTTAGTACAAGTATTTATGGATAAATTCAATATTGTTGTTT
AAACATTCCATAGCTTTCCTAACTCAAAAATATATCTAGGTGCAAGGTGATGGGGTGATA
GTTGCAACACCAACAGGCAGCACGGCATATTCTACTGCAGCTGGGGGATCAATGGTAGGT
TAATTCTTACACGTTAGTCGTTATTAAAGCATATCTTGACATGGAAAAGTACATTTCCCT
GTGTCATGATGACACCGGGGACCTGTTTCTTCTAATGCTTTTCGCTCCATGTAGCAAAAG
GATATTTCCTATTTATGAAGCACAGAGCTGTTGCTTTTGTATGAAATGACAACATTTTGG
TTACACTGATATAATGTCTACCATGTCATTTTTCTATGGAGAAAAAAAACACTTTGCAGA
TATCAAGGTTCAATACTTAGAAACAATGTTATGCCTTGTTTGTGTTCTTTTACAGTGTAT
TGTTGCATTCATGTGTATTAAGCTCTAAACTGTTTCTTCTCCTGTGCATATCCATCGACT
TAACAGTAATTTGTCTAGGTTCATCCAAATGTCCCATGCATGCTGTTTACTCCAATCTGC
CCTCACTCACTGTCATTTAGACCTGTCATCCTTCCGGATTCCGCACGGCTTGAATTAAAG
GTACTGAACAACTAATGAGGTGCCTATTGTTTCTGTGCAACCTCAATTAACATACTTTCT
GAAAGCTCATCAGGTTTTACCCCGCAACATACCTTGGTTTGCTGACTCATGAACTTTGCG
CTGTTATTGGCATTGCACTTGCAACTTTACCAGATACCAGATGAGGCAAGAAGCAATGCA
TGGGTTTCATTTGATGGCAAAAGGCGGCAGCAACTATCAAGAGGAGACTCTGTTCGTATA
TCCATGAGTCAGCACCCGCTACCAACTGTTAATAAATCTGACCAAACGGGTGATTGGTTC
CGCAGCCTGATCAGGTGCCTCAACTGGAACGAGAGATTAGACCAGAAGGCACTATAGACA
CTAGAATCTTTTTTTATTTTTTGATGTACATATGTAAATTCACGCACAAATATAGTTTTG
TTTTTTCTGCCAACATGTACAGTGCGTAACAACAAAGAACTTTGCATATCAAGGATCTAA
TCAGGTGGCTTGAGGGATAAATGAGAGTTAATAAAAAATTGC