Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004702_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:2:132209731:132244221:-1 gene:Zm00001d004702 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal peptide peptidase-like 3
Sequence

ATGGCGAGCGATAACCGCGCGTCGGTCTTCCCCTTCGCCGCCGCCGTCCTTGTGGTGCTC
CTCGCTGGCGGCGCCGCGGCGGACGACGCCTCCAGCGACGACGACGCTGGGACTTCACGG
ACACCCGGCTGCTCCAACAAGTTCCAGCTGGTCAAGGTGAAGAATTGGGTGAATGGGACT
GAAGGTACAACTTTTGTTGGCCTAAGTGCAAAATTTGGAGCTCCCTTGCCAAGAGATATT
CATGAAGCAAAAAAGTCATTTGCTGTCCTCTCAAATCCAATTGACTGTTGCTCCAACTTG
ACATCAAAGTTAACAAGTTCAGTTGCTATAGCAACACGTGGGGAATGTGCTTTCACGGAA
AAAGCAAATATTGCTCAGGCCAGTGGTTCGACCGGTTTACTAGTTATCAATGATAATGAA
GAGCTTTACAAGATGGTTTGCGGTGAGAATGACACCTCCATTAATGTGACAATACCTGTT
GTCATGATACCACAGTCAGCAGGAAAGAAGCTGAAGAACTTATTGCATCATGGAGCAAGT
GTGGAAGTGCAGCTATATTCACCAAATCGACCAACTGTGGACCTTTCAGCATGCTTCTTA
TGGATAATGGCTGTAGGCACCATAGTCTGTGCTTCACTCTGGACTGAATTTGTTACATGT
GAACAGGTTGATGAGCGTTATAATCAGCTGACCAGAAAGGATGGACCTGACACGGGAACA
AAATACAGAGAAGATAAAGAGGTCTTCGAGATCAGCGCGAAGGGTGCTTTTATTTTTATT
ATAGTAGCTTCAGTTTTCCTCCTCCTCCTGTTCTACTTCATGTCATCTTGGTTCGTTTGG
GTGCTAATTGTACTATTCTGCATTGGTGGTATTGAGGGTATGCATGCTTGCTTGGTCACG
CTTCTAGCTAGGATTTTTAAGGACTGTGGACAAAAGACTGTACAACTCCCTGTTTTGGGG
GAGGTCTTGATCTTATCTGTTGGAATTGTACCATTTTGTGCGGTGTTTGCAATTCTCTGG
GCTGTGTATCGCCATGCTTCATTTGCTTGGATAGGCCAAGACGTTCTGGGTATCTGTTTG
ATGATAACTGTGCTTCAGATGGCACGTTTACCAAATATCAAGGTTGCATCGGCACTTCTT
AGTGCTGCATTTGTGTATGACATCTTTTGGGTGTTCATTTCACCTCTTATATTCCATGAA
AGCGTCATGATTGCAGTTGCTCGTGGTGATAACACTGGGGAATCAATTCCTATGCTCCTA
AGGATACCCCGCTTCTTTGATCCATGGGGTGGTTATGATATGATAGGCTTTGGTGACATT
ATCTTCCCTGGATTGCTTGTTGGATTCAGCTATAGATTTGACAGAGCAAACAGAAAGGGT
GTCTTGAGTGGATATTTTCTCTGGCTAATTGTGGGATATGCAGTTGATCGGTGGGTGGAT
GGGTCTCGTATCCAGGATTTTGCCCCTGCCGTGGTGGCTAATGTTGGAAAAAGGGCCCTT
TCTTCCAGGACAGTGGCCCATGCTCTTGAGAACTGGCAGTGGGTCAGCGACATTGTGACC
CCTCTTAATTTGTCTGGGCTGCAGCAATATCTGAACCTTTGGGACACATTGAGGGGAGTG
GTGCTGACTCAGGAGGCTGATAGACATGTGTGGATTCATTCTTCCTCTGGACAGTTCTCT
TCTAAATCATGTTATAAGGCTTTTTTCTTGGGTTCGATTACTTTTGAACCGTGGAAGAGG
CTGTGGAAGTCTTGGGCTCCACCCAAATGCAAATTTTTTATTTGGTTGGCAATAAGGAAT
AAATGTTGGACTGCTGATAGACTGCAGAAAAGAGGGTTAGATCATCTTGAGGTCTGTCCG
TTGTGTGATCAAGAGCCAGAAAATATCCAACACCTCCTTTGCACTTGCGTTTTTTCGCGG
CAGTTTTGGTATTACATTCTTTCTTCGTTGGGGATGGCTAATCTTTCTCCTGACTCTAAT
GAGTCCAGTTTTGCTGACTGGTGGGCGAAAGTAAGTAAGCAAGTGCACAAATCTAAAAGA
AGAGGCTTTAACAGTATCATCATCTTGGGGGCTTGGTGTTTATGTCTTCATCGTAATAAG
GTGGTTTTTGATGGTGTCAGTCCTTCAATTATTGGCATAAAGGCAATTTTCTGGATGAAG
TTGAATTCTGGAGGCTTGCCGGTGCTAGGCATCTTGAGGCTTTGGTTCCTGGTGCTGGAA
TTTTTAGGTCAAGGGTTCTTTTGGGTGATTAGTGAAGAGCAGGCCTTTTCATTACGTATC
TTGCGCTGTTCTTGA

Peptide Sequence

PEP ID

Zm00001d004702_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:2:132209731:132244221:-1 gene:Zm00001d004702 transcript:Zm00001d004702_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal peptide peptidase-like 3
Sequence

MASDNRASVFPFAAAVLVVLLAGGAAADDASSDDDAGTSRTPGCSNKFQLVKVKNWVNGT
EGTTFVGLSAKFGAPLPRDIHEAKKSFAVLSNPIDCCSNLTSKLTSSVAIATRGECAFTE
KANIAQASGSTGLLVINDNEELYKMVCGENDTSINVTIPVVMIPQSAGKKLKNLLHHGAS
VEVQLYSPNRPTVDLSACFLWIMAVGTIVCASLWTEFVTCEQVDERYNQLTRKDGPDTGT
KYREDKEVFEISAKGAFIFIIVASVFLLLLFYFMSSWFVWVLIVLFCIGGIEGMHACLVT
LLARIFKDCGQKTVQLPVLGEVLILSVGIVPFCAVFAILWAVYRHASFAWIGQDVLGICL
MITVLQMARLPNIKVASALLSAAFVYDIFWVFISPLIFHESVMIAVARGDNTGESIPMLL
RIPRFFDPWGGYDMIGFGDIIFPGLLVGFSYRFDRANRKGVLSGYFLWLIVGYAVDRWVD
GSRIQDFAPAVVANVGKRALSSRTVAHALENWQWVSDIVTPLNLSGLQQYLNLWDTLRGV
VLTQEADRHVWIHSSSGQFSSKSCYKAFFLGSITFEPWKRLWKSWAPPKCKFFIWLAIRN
KCWTADRLQKRGLDHLEVCPLCDQEPENIQHLLCTCVFSRQFWYYILSSLGMANLSPDSN
ESSFADWWAKVSKQVHKSKRRGFNSIIILGAWCLCLHRNKVVFDGVSPSIIGIKAIFWMK
LNSGGLPVLGILRLWFLVLEFLGQGFFWVISEEQAFSLRILRCS

Transcript Sequence

Transcript ID

Zm00001d004702_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:132209731:132244221:-1 gene:Zm00001d004702 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal peptide peptidase-like 3
Sequence

ACCGCAAAGCACCCCCTCTCCCCCCGTCGCCATGGCGAGCGATAACCGCGCGTCGGTCTT
CCCCTTCGCCGCCGCCGTCCTTGTGGTGCTCCTCGCTGGCGGCGCCGCGGCGGACGACGC
CTCCAGCGACGACGACGCTGGGACTTCACGGACACCCGGCTGCTCCAACAAGTTCCAGCT
GGTCAAGGTGAAGAATTGGGTGAATGGGACTGAAGGTACAACTTTTGTTGGCCTAAGTGC
AAAATTTGGAGCTCCCTTGCCAAGAGATATTCATGAAGCAAAAAAGTCATTTGCTGTCCT
CTCAAATCCAATTGACTGTTGCTCCAACTTGACATCAAAGTTAACAAGTTCAGTTGCTAT
AGCAACACGTGGGGAATGTGCTTTCACGGAAAAAGCAAATATTGCTCAGGCCAGTGGTTC
GACCGGTTTACTAGTTATCAATGATAATGAAGAGCTTTACAAGATGGTTTGCGGTGAGAA
TGACACCTCCATTAATGTGACAATACCTGTTGTCATGATACCACAGTCAGCAGGAAAGAA
GCTGAAGAACTTATTGCATCATGGAGCAAGTGTGGAAGTGCAGCTATATTCACCAAATCG
ACCAACTGTGGACCTTTCAGCATGCTTCTTATGGATAATGGCTGTAGGCACCATAGTCTG
TGCTTCACTCTGGACTGAATTTGTTACATGTGAACAGGTTGATGAGCGTTATAATCAGCT
GACCAGAAAGGATGGACCTGACACGGGAACAAAATACAGAGAAGATAAAGAGGTCTTCGA
GATCAGCGCGAAGGGTGCTTTTATTTTTATTATAGTAGCTTCAGTTTTCCTCCTCCTCCT
GTTCTACTTCATGTCATCTTGGTTCGTTTGGGTGCTAATTGTACTATTCTGCATTGGTGG
TATTGAGGGTATGCATGCTTGCTTGGTCACGCTTCTAGCTAGGATTTTTAAGGACTGTGG
ACAAAAGACTGTACAACTCCCTGTTTTGGGGGAGGTCTTGATCTTATCTGTTGGAATTGT
ACCATTTTGTGCGGTGTTTGCAATTCTCTGGGCTGTGTATCGCCATGCTTCATTTGCTTG
GATAGGCCAAGACGTTCTGGGTATCTGTTTGATGATAACTGTGCTTCAGATGGCACGTTT
ACCAAATATCAAGGTTGCATCGGCACTTCTTAGTGCTGCATTTGTGTATGACATCTTTTG
GGTGTTCATTTCACCTCTTATATTCCATGAAAGCGTCATGATTGCAGTTGCTCGTGGTGA
TAACACTGGGGAATCAATTCCTATGCTCCTAAGGATACCCCGCTTCTTTGATCCATGGGG
TGGTTATGATATGATAGGCTTTGGTGACATTATCTTCCCTGGATTGCTTGTTGGATTCAG
CTATAGATTTGACAGAGCAAACAGAAAGGGTGTCTTGAGTGGATATTTTCTCTGGCTAAT
TGTGGGATATGCAGTTGATCGGTGGGTGGATGGGTCTCGTATCCAGGATTTTGCCCCTGC
CGTGGTGGCTAATGTTGGAAAAAGGGCCCTTTCTTCCAGGACAGTGGCCCATGCTCTTGA
GAACTGGCAGTGGGTCAGCGACATTGTGACCCCTCTTAATTTGTCTGGGCTGCAGCAATA
TCTGAACCTTTGGGACACATTGAGGGGAGTGGTGCTGACTCAGGAGGCTGATAGACATGT
GTGGATTCATTCTTCCTCTGGACAGTTCTCTTCTAAATCATGTTATAAGGCTTTTTTCTT
GGGTTCGATTACTTTTGAACCGTGGAAGAGGCTGTGGAAGTCTTGGGCTCCACCCAAATG
CAAATTTTTTATTTGGTTGGCAATAAGGAATAAATGTTGGACTGCTGATAGACTGCAGAA
AAGAGGGTTAGATCATCTTGAGGTCTGTCCGTTGTGTGATCAAGAGCCAGAAAATATCCA
ACACCTCCTTTGCACTTGCGTTTTTTCGCGGCAGTTTTGGTATTACATTCTTTCTTCGTT
GGGGATGGCTAATCTTTCTCCTGACTCTAATGAGTCCAGTTTTGCTGACTGGTGGGCGAA
AGTAAGTAAGCAAGTGCACAAATCTAAAAGAAGAGGCTTTAACAGTATCATCATCTTGGG
GGCTTGGTGTTTATGTCTTCATCGTAATAAGGTGGTTTTTGATGGTGTCAGTCCTTCAAT
TATTGGCATAAAGGCAATTTTCTGGATGAAGTTGAATTCTGGAGGCTTGCCGGTGCTAGG
CATCTTGAGGCTTTGGTTCCTGGTGCTGGAATTTTTAGGTCAAGGGTTCTTTTGGGTGAT
TAGTGAAGAGCAGGCCTTTTCATTACGTATCTTGCGCTGTTCTTGATGGACGGGCATGGT
CAACCTGCGTTGTTGTACCTTGTGCCATGTACATTGGGGGTTATTGTTATTCTTGGTTGG
TTAAGAGGTGAGCTTTATGAATTATGGAACTTCGGAAAAAGTCCAGGAGAAAATTTTGTC
AATGAACCATGACAACAAAATCCAGGGAAGATGTATTCTTCAGCGTAGTAGATAGCTTGA
GGATGTTTATTAGGAGGCACCGTGTATTGCAAGATGTTATGTTTAGCATTATTTCAAAGA
AGGATGCTATTGTGTTTGAAAAAAATGATATACATGTAAGATGCAAGCATGTACTCCCAC
AGTCGTAAAATAATCCAATATAAGTGCCGCTATATAGTTC