Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d004697_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:131929878:131937148:1 gene:Zm00001d004697 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 6 description:IAA27-auxin-responsive Aux/IAA family member

Sequence

ATGCTGAACCTGGCACCATTTGAGACGCCGCCTCTTGGAAGGCAGGAAACATCAGCTAAT
AATCCTACCGTCGCCGCCGTCAGGGGAAACGAAGAAAGCTCCAGCAACACTTGCTTGCAT
GGACATCTGGACCTCAGCCTCGGCATCTCCTTGTCTCATGGCGGCTGCGCCTGCGCCTGC
GACGCATCCAGCTGTGGAGGAAACAAGCAGGAGAGCTACGGTGGTCGAGAGGGCAGCAGC
CGTGACGACAAGGCGGCCGTCGGTCGCTGCATGACCAGCGGCACCACCACCACTGCAAGT
GTAGGACACGACGCCCATGCCGGTGATTTGACAGCAGGAGGAGGTGGCTGGACAGCACCG
TTCGTGCTGAGCCCGACCGCCGCCTTCTTCATGCATCCATGGAGCCTCGCCGCACGGCAG
CAGAAGGCTGCTGCCGAGCAAGACCGGACGCCTCCGCCTCCTACTACCTACATGTCGAGC
GACGGCGACCGTGCGGTCACATCGCCGTCGGCCGTCGGCTGGCCGCCAGTGCACACATCC
CGGCGCAACATCATCGTCACCGCCATGCACGTGAGCAGGACTGCTGCTGGCGCCACCGCC
GTCGCGGCACACGACGGACCCGACGACAGCACGACGACGACGACGCACGCCGGCCGCGAG
AAGGATGCGGTGGCGCCGCCGCCTCCGACGGGCAGCTCGGTGGTTATAGCGGCACGCCGG
CCTCCGCCGGCGAACATGTTCGCCAAGGTACACATGGACGGCTACGCGATTGGCAGGAAG
ATCAACCTCAGGGCGCAAGGCGGCTATGCCTCCCTCTCCAGGGTGCTCACCAACATGACA
ACAAACTTCTACTCGCCCGCAGACTGTTCTACAGGCGCAACAGGCACGGGAGAAAAAGAT
CTTCCAACCAATAATGACAAGTTCATATTTCTGTATGAAGACTTCGAGGGTGACCGAATG
CTGGTTGGTGACGTTCCATGGGAATTATTCCTAGCGTCTGCTAAAAGATTGTACATTGTC
CGAAACCCAACATCAAGTGACAAAGGGTGA

Peptide Sequence

PEP ID

Zm00001d004697_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:131929878:131937148:1 gene:Zm00001d004697 transcript:Zm00001d004697_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 6 description:IAA27-auxin-responsive Aux/IAA family member

Sequence

MLNLAPFETPPLGRQETSANNPTVAAVRGNEESSSNTCLHGHLDLSLGISLSHGGCACAC
DASSCGGNKQESYGGREGSSRDDKAAVGRCMTSGTTTTASVGHDAHAGDLTAGGGGWTAP
FVLSPTAAFFMHPWSLAARQQKAAAEQDRTPPPPTTYMSSDGDRAVTSPSAVGWPPVHTS
RRNIIVTAMHVSRTAAGATAVAAHDGPDDSTTTTTHAGREKDAVAPPPPTGSSVVIAARR
PPPANMFAKVHMDGYAIGRKINLRAQGGYASLSRVLTNMTTNFYSPADCSTGATGTGEKD
LPTNNDKFIFLYEDFEGDRMLVGDVPWELFLASAKRLYIVRNPTSSDKG

Transcript Sequence

Transcript ID

Zm00001d004697_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:131929878:131937148:1 gene:Zm00001d004697 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Aux/IAA-transcription factor 6 description:IAA27-auxin-responsive Aux/IAA family member

Sequence

ATAAACCCCTCACCAACACTCACTCTCTCACTCCCGGCCCCGGCCGTGCAGCACACACAC
CTCACTCCTCTTCTCCTTGCTAGCACTCTTCTCAGGTCTCAGCAAGCTACTAGCTCATCC
ACATGCTGAACCTGGCACCATTTGAGACGCCGCCTCTTGGAAGGCAGGAAACATCAGCTA
ATAATCCTACCGTCGCCGCCGTCAGGGGAAACGAAGAAAGCTCCAGCAACACTTGCTTGC
ATGGACATCTGGACCTCAGCCTCGGCATCTCCTTGTCTCATGGCGGCTGCGCCTGCGCCT
GCGACGCATCCAGCTGTGGAGGAAACAAGCAGGAGAGCTACGGTGGTCGAGAGGGCAGCA
GCCGTGACGACAAGGCGGCCGTCGGTCGCTGCATGACCAGCGGCACCACCACCACTGCAA
GTGTAGGACACGACGCCCATGCCGGTGATTTGACAGCAGGAGGAGGTGGCTGGACAGCAC
CGTTCGTGCTGAGCCCGACCGCCGCCTTCTTCATGCATCCATGGAGCCTCGCCGCACGGC
AGCAGAAGGCTGCTGCCGAGCAAGACCGGACGCCTCCGCCTCCTACTACCTACATGTCGA
GCGACGGCGACCGTGCGGTCACATCGCCGTCGGCCGTCGGCTGGCCGCCAGTGCACACAT
CCCGGCGCAACATCATCGTCACCGCCATGCACGTGAGCAGGACTGCTGCTGGCGCCACCG
CCGTCGCGGCACACGACGGACCCGACGACAGCACGACGACGACGACGCACGCCGGCCGCG
AGAAGGATGCGGTGGCGCCGCCGCCTCCGACGGGCAGCTCGGTGGTTATAGCGGCACGCC
GGCCTCCGCCGGCGAACATGTTCGCCAAGGTACACATGGACGGCTACGCGATTGGCAGGA
AGATCAACCTCAGGGCGCAAGGCGGCTATGCCTCCCTCTCCAGGGTGCTCACCAACATGA
CAACAAACTTCTACTCGCCCGCAGACTGTTCTACAGGCGCAACAGGCACGGGAGAAAAAG
ATCTTCCAACCAATAATGACAAGTTCATATTTCTGTATGAAGACTTCGAGGGTGACCGAA
TGCTGGTTGGTGACGTTCCATGGGAATTATTCCTAGCGTCTGCTAAAAGATTGTACATTG
TCCGAAACCCAACATCAAGTGACAAAGGGTGAAGATGACAGAAAATATACAACCGAACAA
CCGACCGATGACTGAAGGCACTCTTCAAGCAAGTGATCAGAAGGACATCTCTTGATCTGG
CATATACAACTTCGAGAAGTAGTTTTCTTCTTGTACTAATTAAGTAATGTAGCTAGTATT
TATGTGAGTTCTATGTTGTACTATTGGTGTTTCCTAATCAATGTGCATATAATTTTGATC
GTTTTGTAAGGAGAGACGTCCTAGGAAGGAAGAAACATGCTGTCAACCTTGCTCTAAAGT
CTAAACAGTGACAAAATGTAACACTTCAAAAATCTTATTTTTGATATTTATAAAAGTTTC
TAAAAAAAATCGAGTTAAAACATCTTTTAATAATAGATTTCTTTCTTTATAAAGGATATC
TCTCTAAAATAAATAA